RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 A0A087WZ62 844 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 CACNG3O60359 315 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 THRAP10827 490 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 PPM1LQ5SGD2 360 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 IRAK1BP1Q5VVH5 260 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 C8orf82Q6P1X6 216 aaPredicted RBP13.35□□□□□ -0.27
SKP2-209ENST00000620197 PGAM4Q8N0Y7 254 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 EFCAB3Q8N7B9 438 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 TDRD5Q8NAT2 981 aaKnown RBP13.35□□□□□ -0.27
SKP2-209ENST00000620197 ZFRQ96KR1 1074 aaKnown RBP13.35□□□□□ -0.27
SKP2-209ENST00000620197 SNX27Q96L92 541 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 GPR78Q96P69 363 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 LPIN3Q9BQK8 851 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 FDXACB1Q9BRP7 624 aaPredicted RBP13.35□□□□□ -0.27
SKP2-209ENST00000620197 GATA5Q9BWX5 397 aaPredicted RBP13.35□□□□□ -0.27
SKP2-209ENST00000620197 TCF7L2Q9NQB0 619 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 MAN1C1Q9NR34 630 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.35□□□□□ -0.27
SKP2-209ENST00000620197 RAP2CQ9Y3L5 183 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 PPP2R3BQ9Y5P8 575 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 RAD54BQ9Y620 910 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 LTBP3Q9NS15 1303 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 ZNF189O75820 626 aaPredicted RBP13.35□□□□□ -0.27
SKP2-209ENST00000620197 MLH1P40692 756 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 CSE1LP55060 971 aaKnown RBP13.35□□□□□ -0.27
SKP2-209ENST00000620197 C16orf89Q6UX73 402 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 APOBEC3FQ8IUX4 373 aaKnown RBP13.35□□□□□ -0.27
SKP2-209ENST00000620197 CCDC124Q96CT7 223 aaKnown RBP13.35□□□□□ -0.27
SKP2-209ENST00000620197 KLHL32Q96NJ5 620 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 PGLYRP2Q96PD5 576 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 SLC2A13Q96QE2 648 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 UHRF1Q96T88 793 aaPredicted RBP13.35□□□□□ -0.27
SKP2-209ENST00000620197 NPY6RQ99463 290 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 AGAP2Q99490 1192 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 SHCBP1LQ9BZQ2 653 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 CYP4F11Q9HBI6 524 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 MRM3Q9HC36 420 aaKnown RBP13.35□□□□□ -0.27
SKP2-209ENST00000620197 ZBTB26Q9HCK0 441 aa13.35□□□□□ -0.27
SKP2-209ENST00000620197 NYNRINQ9P2P1 1898 aaKnown RBP13.34□□□□□ -0.27
SKP2-209ENST00000620197 TRIM13O60858 407 aa13.34□□□□□ -0.27
SKP2-209ENST00000620197 C8BP07358 591 aa13.34□□□□□ -0.27
SKP2-209ENST00000620197 ZNF26P17031 533 aaPredicted RBP13.34□□□□□ -0.27
SKP2-209ENST00000620197 XRCC1P18887 633 aaPredicted RBP13.34□□□□□ -0.27
SKP2-209ENST00000620197 TYK2P29597 1187 aa13.34□□□□□ -0.27
SKP2-209ENST00000620197 PRKAA2P54646 552 aa13.34□□□□□ -0.27
SKP2-209ENST00000620197 SNX16P57768 344 aa13.34□□□□□ -0.27
SKP2-209ENST00000620197 CDKL1Q00532 357 aa13.34□□□□□ -0.27
SKP2-209ENST00000620197 LSM12Q3MHD2 195 aaKnown RBP13.34□□□□□ -0.27
SKP2-209ENST00000620197 SH2D4BQ5SQS7 431 aa13.34□□□□□ -0.27
SKP2-209ENST00000620197 KLHDC10Q6PID8 442 aa13.34□□□□□ -0.27
SKP2-209ENST00000620197 CHSY3Q70JA7 882 aa13.34□□□□□ -0.27
SKP2-209ENST00000620197 CNTN4Q8IWV2 1026 aa13.34□□□□□ -0.27
SKP2-209ENST00000620197 CHERPQ8IWX8 916 aaKnown RBP13.34□□□□□ -0.27
SKP2-209ENST00000620197 SPATA33Q96N06 139 aa13.34□□□□□ -0.27
SKP2-209ENST00000620197 GCNAQ96QF7 691 aa13.34□□□□□ -0.27
SKP2-209ENST00000620197 GPR22Q99680 433 aa13.34□□□□□ -0.27
SKP2-209ENST00000620197 MLPHQ9BV36 600 aaPredicted RBP13.34□□□□□ -0.27
SKP2-209ENST00000620197 SNX9Q9Y5X1 595 aa13.34□□□□□ -0.27
SKP2-209ENST00000620197 SHROOM3Q8TF72 1996 aa13.34□□□□□ -0.27
SKP2-209ENST00000620197 E9PBE3 544 aa13.34□□□□□ -0.27
SKP2-209ENST00000620197 I6L893 689 aaPredicted RBP13.34□□□□□ -0.27
SKP2-209ENST00000620197 HDAC3O15379 428 aa13.34□□□□□ -0.27
SKP2-209ENST00000620197 KLHL41O60662 606 aa13.34□□□□□ -0.27
SKP2-209ENST00000620197 DAB1O75553 588 aa13.34□□□□□ -0.27
SKP2-209ENST00000620197 CYP2B6P20813 491 aa13.34□□□□□ -0.27
SKP2-209ENST00000620197 CD68P34810 354 aaPredicted RBP13.34□□□□□ -0.27
SKP2-209ENST00000620197 PPARGP37231 505 aaPredicted RBP13.34□□□□□ -0.27
SKP2-209ENST00000620197 GARSP41250 739 aaKnown RBP13.34□□□□□ -0.27
SKP2-209ENST00000620197 SESN2P58004 480 aaPredicted RBP13.34□□□□□ -0.27
SKP2-209ENST00000620197 SCAPQ12770 1279 aa13.34□□□□□ -0.27
SKP2-209ENST00000620197 GK3PQ14409 553 aa13.34□□□□□ -0.27
SKP2-209ENST00000620197 R3HDM1Q15032 1099 aaKnown RBP13.34□□□□□ -0.27
SKP2-209ENST00000620197 TSTD2Q5T7W7 516 aa13.34□□□□□ -0.27
SKP2-209ENST00000620197 KYQ8NBH2 561 aa13.34□□□□□ -0.27
SKP2-209ENST00000620197 DLG3Q92796 817 aa13.34□□□□□ -0.27
SKP2-209ENST00000620197 LRRC40Q9H9A6 602 aa13.34□□□□□ -0.27
SKP2-209ENST00000620197 PIH1D1Q9NWS0 290 aaKnown RBP13.34□□□□□ -0.27
SKP2-209ENST00000620197 HES2Q9Y543 173 aa13.34□□□□□ -0.27
SKP2-209ENST00000620197 LOC100653049A0A140TA62 436 aa13.33□□□□□ -0.27
SKP2-209ENST00000620197 TCAF2A6NFQ2 919 aa13.33□□□□□ -0.27
SKP2-209ENST00000620197 USP2O75604 605 aaPredicted RBP13.33□□□□□ -0.27
SKP2-209ENST00000620197 KRT34O76011 436 aa13.33□□□□□ -0.27
SKP2-209ENST00000620197 CHRNGP07510 517 aa13.33□□□□□ -0.27
SKP2-209ENST00000620197 PTPN3P26045 913 aa13.33□□□□□ -0.27
SKP2-209ENST00000620197 PMLP29590 882 aa13.33□□□□□ -0.27
SKP2-209ENST00000620197 SPRP35270 261 aaPredicted RBP13.33□□□□□ -0.27
SKP2-209ENST00000620197 BCAT1P54687 386 aa13.33□□□□□ -0.27
SKP2-209ENST00000620197 ARHGAP1Q07960 439 aa13.33□□□□□ -0.27
SKP2-209ENST00000620197 OLIG2Q13516 323 aa13.33□□□□□ -0.27
SKP2-209ENST00000620197 LRRC23Q53EV4 343 aaPredicted RBP13.33□□□□□ -0.27
SKP2-209ENST00000620197 MARCH8Q5T0T0 291 aa13.33□□□□□ -0.27
SKP2-209ENST00000620197 TP53INP2Q8IXH6 220 aa13.33□□□□□ -0.27
SKP2-209ENST00000620197 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.33□□□□□ -0.27
SKP2-209ENST00000620197 HMGCLL1Q8TB92 370 aa13.33□□□□□ -0.27
SKP2-209ENST00000620197 URGCPQ8TCY9 931 aa13.33□□□□□ -0.27
SKP2-209ENST00000620197 RNF139Q8WU17 664 aa13.33□□□□□ -0.27
SKP2-209ENST00000620197 STYXQ8WUJ0 223 aa13.33□□□□□ -0.27
SKP2-209ENST00000620197 HSFY1Q96LI6 401 aa13.33□□□□□ -0.27
SKP2-209ENST00000620197 NMRAL1Q9HBL8 299 aa13.33□□□□□ -0.27
SKP2-209ENST00000620197 FAM49BQ9NUQ9 324 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms