RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 CDO1Q16878 200 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 MPPE1Q53F39 396 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 DNAJC21Q5F1R6 531 aaKnown RBP5.41□□□□□ -1.54
SHMT1-211ENST00000618902 MS4A13Q5J8X5 152 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 MANEALQ5VSG8 457 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 RAP1GAP2Q684P5 730 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 TXNRD3NBQ6F5E7 133 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 PKN3Q6P5Z2 889 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 TPGS1Q6ZTW0 290 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 H2AFVQ71UI9 128 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 B4GALNT4Q76KP1 1039 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 CIR1Q86X95 450 aaPredicted RBP5.41□□□□□ -1.54
SHMT1-211ENST00000618902 CCDC117Q8IWD4 279 aaPredicted RBP5.41□□□□□ -1.54
SHMT1-211ENST00000618902 MAML2Q8IZL2 1156 aaPredicted RBP5.41□□□□□ -1.54
SHMT1-211ENST00000618902 SYCE1Q8N0S2 351 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 CFAP52Q8N1V2 620 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 PYROXD2Q8N2H3 581 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 ARFGAP2Q8N6H7 521 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 OR52K2Q8NGK3 314 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 WFIKKN2Q8TEU8 576 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 FAM172AQ8WUF8 416 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 CAVIN3Q969G5 261 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 IGSF8Q969P0 613 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 PBKQ96KB5 322 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 CNPY3Q9BT09 278 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 NUP85Q9BW27 656 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 LACRTQ9GZZ8 138 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 PCED1AQ9H1Q7 454 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 POLMQ9NP87 494 aaPredicted RBP5.41□□□□□ -1.54
SHMT1-211ENST00000618902 OSGEPQ9NPF4 335 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 ZDHHC4Q9NPG8 344 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.41□□□□□ -1.54
SHMT1-211ENST00000618902 DONSONQ9NYP3 566 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 ZNF212Q9UDV6 495 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 GGA2Q9UJY4 613 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 MMP17Q9ULZ9 603 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 NDRG2Q9UN36 371 aaKnown RBP5.41□□□□□ -1.54
SHMT1-211ENST00000618902 NEU3Q9UQ49 428 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 HS3ST4Q9Y661 456 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 ACACBO00763 2458 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 NUP205Q92621 2012 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 DOCK4Q8N1I0 1966 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 NCOR2Q9Y618 2525 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 EPG5Q9HCE0 2579 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 A0A0A6YYK5 440 aaPredicted RBP5.4□□□□□ -1.54
SHMT1-211ENST00000618902 ANKRD62A6NC57 917 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 TBC1D3BA6NDS4 549 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 PRRT4C9JH25 899 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 CCDC188H7C350 402 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 K7EQS6 105 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 K7ESF4 209 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 POLR3GO15318 223 aaPredicted RBP5.4□□□□□ -1.54
SHMT1-211ENST00000618902 TULP3O75386 442 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 LRCH4O75427 683 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 CNTN5O94779 1100 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 RHOBTB1O94844 696 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 KAT7O95251 611 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 RHOXF2BP0C7M4 288 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 TMEM253P0C7T8 217 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 MYBL1P10243 752 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 TYRP14679 529 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 TACR2P21452 398 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 MIPP30301 263 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 SDC4P31431 198 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 CCR1P32246 355 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 RDXP35241 583 aaKnown RBP5.4□□□□□ -1.54
SHMT1-211ENST00000618902 ADRA1BP35368 520 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 NUMBP49757 651 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 TAS2R40P59535 323 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 VSNL1P62760 191 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 LMNB2Q03252 620 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 DEUP1Q05D60 604 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 KDSRQ06136 332 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 SEMA3BQ13214 749 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 CUL1Q13616 776 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 AUHQ13825 339 aaKnown RBP5.4□□□□□ -1.54
SHMT1-211ENST00000618902 CRY1Q16526 586 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 ANO4Q32M45 955 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 C5orf22Q49AR2 442 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 USP39Q53GS9 565 aaKnown RBP5.4□□□□□ -1.54
SHMT1-211ENST00000618902 FSCBQ5H9T9 825 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 TMEM215Q68D42 235 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 FBXL22Q6P050 247 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 DCUN1D2Q6PH85 259 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 SLC36A4Q6YBV0 504 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 Q6ZS52 159 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 MICALCLQ6ZW33 695 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 STRADAQ7RTN6 431 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 ERMP1Q7Z2K6 904 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 TAX1BP1Q86VP1 789 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 RASSF3Q86WH2 238 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 CREG2Q8IUH2 290 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 LGI2Q8N0V4 545 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 MREGQ8N565 214 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 TERB1Q8NA31 727 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 SUMF1Q8NBK3 374 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 SPATA4Q8NEY3 305 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 FAM76AQ8TAV0 307 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 USP33Q8TEY7 942 aa5.4□□□□□ -1.54
SHMT1-211ENST00000618902 GAB3Q8WWW8 586 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms