RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 CREB3L3Q68CJ9 461 aa7.16□□□□□ -1.26
SCAMP1-206ENST00000618166 TBC1D3GQ6DHY5 549 aa7.16□□□□□ -1.26
SCAMP1-206ENST00000618166 TBC1D3CQ6IPX1 549 aa7.16□□□□□ -1.26
SCAMP1-206ENST00000618166 TCTN3Q6NUS6 607 aa7.16□□□□□ -1.26
SCAMP1-206ENST00000618166 C4orf50Q6ZRC1 276 aa7.16□□□□□ -1.26
SCAMP1-206ENST00000618166 CXXC5Q7LFL8 322 aaKnown RBP7.16□□□□□ -1.26
SCAMP1-206ENST00000618166 MMAAQ8IVH4 418 aaKnown RBP7.16□□□□□ -1.26
SCAMP1-206ENST00000618166 SLC35F3Q8IY50 421 aa7.16□□□□□ -1.26
SCAMP1-206ENST00000618166 TBC1D3Q8IZP1 549 aaPredicted RBP7.16□□□□□ -1.26
SCAMP1-206ENST00000618166 IL22RA1Q8N6P7 574 aa7.16□□□□□ -1.26
SCAMP1-206ENST00000618166 GLIS1Q8NBF1 620 aa7.16□□□□□ -1.26
SCAMP1-206ENST00000618166 OR13H1Q8NG92 308 aa7.16□□□□□ -1.26
SCAMP1-206ENST00000618166 OR6B3Q8NGW1 331 aa7.16□□□□□ -1.26
SCAMP1-206ENST00000618166 KLHDC7BQ96G42 594 aa7.16□□□□□ -1.26
SCAMP1-206ENST00000618166 PCED1BQ96HM7 432 aa7.16□□□□□ -1.26
SCAMP1-206ENST00000618166 OMDQ99983 421 aa7.16□□□□□ -1.26
SCAMP1-206ENST00000618166 SYT15Q9BQS2 421 aa7.16□□□□□ -1.26
SCAMP1-206ENST00000618166 DUSP23Q9BVJ7 150 aa7.16□□□□□ -1.26
SCAMP1-206ENST00000618166 RNF26Q9BY78 433 aaPredicted RBP7.16□□□□□ -1.26
SCAMP1-206ENST00000618166 KRTAP4-11Q9BYQ6 195 aa7.16□□□□□ -1.26
SCAMP1-206ENST00000618166 BHMT2Q9H2M3 363 aa7.16□□□□□ -1.26
SCAMP1-206ENST00000618166 NCOA5Q9HCD5 579 aaKnown RBP7.16□□□□□ -1.26
SCAMP1-206ENST00000618166 FZD3Q9NPG1 666 aa7.16□□□□□ -1.26
SCAMP1-206ENST00000618166 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.16□□□□□ -1.267e-6■■■■■ 74.5
SCAMP1-206ENST00000618166 DNAJC28Q9NX36 388 aa7.16□□□□□ -1.26
SCAMP1-206ENST00000618166 NUDT5Q9UKK9 219 aa7.16□□□□□ -1.26
SCAMP1-206ENST00000618166 PHTF1Q9UMS5 762 aa7.16□□□□□ -1.26
SCAMP1-206ENST00000618166 A0A1W2PQM1 296 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 TMEM200CA6NKL6 621 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 STMND1H3BQB6 276 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 GABRDO14764 452 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 KRT86O43790 486 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 PRICKLE3O43900 615 aaPredicted RBP7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 DTNBO60941 627 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 KLKB1P03952 638 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 CPA1P15085 419 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 YWHAQP27348 245 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 CCL7P80098 99 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 OVGP1Q12889 678 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 STRN3Q13033 797 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 SEPT6Q14141 434 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 CALCRLQ16602 461 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 ADCK5Q3MIX3 580 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 TAOK1Q7L7X3 1001 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 CDH24Q86UP0 819 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 CCDC13Q8IYE1 715 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 UNC5BQ8IZJ1 945 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 KBTBD7Q8WVZ9 684 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 GOLGA1Q92805 767 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 KLK6Q92876 244 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 C19orf60Q96EN9 201 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 C8orf48Q96LL4 319 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 ZNF518BQ9C0D4 1074 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 STRADBQ9C0K7 418 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 SEMA6CQ9H3T2 930 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 TUFT1Q9NNX1 390 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 CYTH4Q9UIA0 394 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 CPSF3Q9UKF6 684 aaKnown RBP7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 NME7Q9Y5B8 376 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 KCNMB2Q9Y691 235 aa7.15□□□□□ -1.26
SCAMP1-206ENST00000618166 RP1P56715 2156 aa7.15□□□□□ -1.27
SCAMP1-206ENST00000618166 MAP1AP78559 2803 aaPredicted RBP7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 FN1P02751 2386 aaKnown RBP7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 COL6A5A8TX70 2615 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 CCDC196A0A1B0GTZ2 297 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 SLC12A8A0AV02 714 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 NEMP2A6NFY4 417 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 CLDN5O00501 218 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 OGTO15294 1046 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 TLR5O60602 858 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 MAGEC1O60732 1142 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 HUS1O60921 280 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 RPLP0P05388 317 aaKnown RBP7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 PDGFRBP09619 1106 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 ZDHHC11BP0C7U3 371 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 CCL4P13236 92 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 PRLRP16471 622 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 HLA-FP30511 346 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 POLR2BP30876 1174 aaKnown RBP7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 SLC8A1P32418 973 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 UGT1A3P35503 534 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 ADH7P40394 386 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 LEPRP48357 1165 aaKnown RBP7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 PSMD8P48556 350 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 ACOT2P49753 483 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 ATP1A2P50993 1020 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 GDF10P55107 478 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 CLDN2P57739 230 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 RAD51AP2Q09MP3 1159 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 FGL2Q14314 439 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 SOWAHAQ2M3V2 549 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 MDH1BQ5I0G3 518 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 SNX30Q5VWJ9 437 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 OR6B2Q6IFH4 312 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 C16orf46Q6P387 395 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 SHISA2Q6UWI4 295 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 ZPBP2Q6X784 338 aa7.14□□□□□ -1.27
SCAMP1-206ENST00000618166 ADIPOR2Q86V24 386 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms