RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 TTC31Q49AM3 519 aaPredicted RBP10.78□□□□□ -0.68
TPM4-209ENST00000588483 RAB6CQ53S08 254 aa10.78□□□□□ -0.68
TPM4-209ENST00000588483 C6orf118Q5T5N4 469 aa10.78□□□□□ -0.68
TPM4-209ENST00000588483 SH3PXD2AQ5TCZ1 1133 aa10.78□□□□□ -0.68
TPM4-209ENST00000588483 RNF219Q5W0B1 726 aaPredicted RBP10.78□□□□□ -0.68
TPM4-209ENST00000588483 HGSNATQ68CP4 663 aa10.78□□□□□ -0.68
TPM4-209ENST00000588483 TCEAL6Q6IPX3 200 aa10.78□□□□□ -0.68
TPM4-209ENST00000588483 DNAJC24Q6P3W2 148 aa10.78□□□□□ -0.68
TPM4-209ENST00000588483 NLRP14Q86W24 1093 aa10.78□□□□□ -0.68
TPM4-209ENST00000588483 DCAF4L2Q8NA75 395 aa10.78□□□□□ -0.68
TPM4-209ENST00000588483 FAM172AQ8WUF8 416 aa10.78□□□□□ -0.68
TPM4-209ENST00000588483 PIGKQ92643 395 aa10.78□□□□□ -0.68
TPM4-209ENST00000588483 TCEAL3Q969E4 200 aa10.78□□□□□ -0.68
TPM4-209ENST00000588483 ERLEC1Q96DZ1 483 aa10.78□□□□□ -0.68
TPM4-209ENST00000588483 HSPA12BQ96MM6 686 aa10.78□□□□□ -0.68
TPM4-209ENST00000588483 FAM129BQ96TA1 746 aa10.78□□□□□ -0.68
TPM4-209ENST00000588483 PSMB7Q99436 277 aa10.78□□□□□ -0.68
TPM4-209ENST00000588483 CNPY3Q9BT09 278 aa10.78□□□□□ -0.68
TPM4-209ENST00000588483 C2orf49Q9BVC5 232 aaPredicted RBP10.78□□□□□ -0.68
TPM4-209ENST00000588483 ZYG11BQ9C0D3 744 aa10.78□□□□□ -0.68
TPM4-209ENST00000588483 RAB6CQ9H0N0 254 aa10.78□□□□□ -0.68
TPM4-209ENST00000588483 SMOC1Q9H4F8 434 aa10.78□□□□□ -0.68
TPM4-209ENST00000588483 CAPN10Q9HC96 672 aa10.78□□□□□ -0.68
TPM4-209ENST00000588483 TMPRSS4Q9NRS4 437 aa10.78□□□□□ -0.68
TPM4-209ENST00000588483 SEPT11Q9NVA2 429 aaKnown RBP10.78□□□□□ -0.68
TPM4-209ENST00000588483 TAS2R14Q9NYV8 317 aa10.78□□□□□ -0.68
TPM4-209ENST00000588483 OR12D3Q9UGF7 316 aa10.78□□□□□ -0.68
TPM4-209ENST00000588483 ADAMTS1Q9UHI8 967 aa10.78□□□□□ -0.68
TPM4-209ENST00000588483 CAPN11Q9UMQ6 739 aa10.78□□□□□ -0.68
TPM4-209ENST00000588483 BZW2Q9Y6E2 419 aaKnown RBP10.78□□□□□ -0.68
TPM4-209ENST00000588483 FAM170AA1A519 330 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 METTL12A8MUP2 240 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 PATE3B3GLJ2 98 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 DDX3XO00571 662 aaKnown RBP eCLIP10.77□□□□□ -0.69
TPM4-209ENST00000588483 ALOX15BO15296 676 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 CCP110O43303 1012 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 RNASEH1O60930 286 aaKnown RBP10.77□□□□□ -0.69
TPM4-209ENST00000588483 DNTTP04053 509 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 SERPINF2P08697 491 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 NNMTP40261 264 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 MAPKAPK2P49137 400 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 STK19P49842 368 aaPredicted RBP10.77□□□□□ -0.69
TPM4-209ENST00000588483 CLCN6P51797 869 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 RPL7AP62424 266 aaKnown RBP10.77□□□□□ -0.69
TPM4-209ENST00000588483 KRT83P78385 493 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 ZBED6P86452 979 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 KLHL30Q0D2K2 578 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 SFSWAPQ12872 951 aaKnown RBP10.77□□□□□ -0.69
TPM4-209ENST00000588483 MAMLD1Q13495 774 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 CST6Q15828 149 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 CDO1Q16878 200 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 DUOXA1Q1HG43 343 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 TRIM61Q5EBN2 209 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 WDR45BQ5MNZ6 344 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 SYCP2LQ5T4T6 812 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 STPG1Q5TH74 334 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 ARMCX6Q7L4S7 300 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 DGLUCYQ7Z3D6 616 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 SH2D3CQ8N5H7 860 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 C1orf216Q8TAB5 229 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 FNIP1Q8TF40 1166 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 RPL10LQ96L21 214 aaKnown RBP10.77□□□□□ -0.69
TPM4-209ENST00000588483 MCEEQ96PE7 176 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 EDEM2Q9BV94 578 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 ISCUQ9H1K1 167 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 PABPC3Q9H361 631 aaKnown RBP10.77□□□□□ -0.69
TPM4-209ENST00000588483 MTG2Q9H4K7 406 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 SGK2Q9HBY8 427 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 PARVAQ9NVD7 372 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 SUSD2Q9UGT4 822 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 SLC25A13Q9UJS0 675 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 VPS28Q9UK41 221 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 FZD4Q9ULV1 537 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 SNX10Q9Y5X0 201 aa10.77□□□□□ -0.69
TPM4-209ENST00000588483 ASCC3Q8N3C0 2202 aaKnown RBP10.77□□□□□ -0.69
TPM4-209ENST00000588483 ANKRD62A6NC57 917 aa10.76□□□□□ -0.69
TPM4-209ENST00000588483 CDX4O14627 284 aaPredicted RBP10.76□□□□□ -0.69
TPM4-209ENST00000588483 RTN2O75298 545 aa10.76□□□□□ -0.69
TPM4-209ENST00000588483 ZMPSTE24O75844 475 aa10.76□□□□□ -0.69
TPM4-209ENST00000588483 LRIG2O94898 1065 aa10.76□□□□□ -0.69
TPM4-209ENST00000588483 ADH1BP00325 375 aa10.76□□□□□ -0.69
TPM4-209ENST00000588483 GYPCP04921 128 aa10.76□□□□□ -0.69
TPM4-209ENST00000588483 RHOCP08134 193 aa10.76□□□□□ -0.69
TPM4-209ENST00000588483 MYBL1P10243 752 aa10.76□□□□□ -0.69
TPM4-209ENST00000588483 SRCP12931 536 aa10.76□□□□□ -0.69
TPM4-209ENST00000588483 RHOQP17081 205 aa10.76□□□□□ -0.69
TPM4-209ENST00000588483 OR1E1P30953 314 aa10.76□□□□□ -0.69
TPM4-209ENST00000588483 HNRNPH3P31942 346 aaKnown RBP10.76□□□□□ -0.69
TPM4-209ENST00000588483 L1CAMP32004 1257 aa10.76□□□□□ -0.69
TPM4-209ENST00000588483 ACSL1P33121 698 aa10.76□□□□□ -0.69
TPM4-209ENST00000588483 HTR7P34969 479 aa10.76□□□□□ -0.69
TPM4-209ENST00000588483 IRX4P78413 519 aa10.76□□□□□ -0.69
TPM4-209ENST00000588483 OGDHQ02218 1023 aa10.76□□□□□ -0.69
TPM4-209ENST00000588483 SEMA3BQ13214 749 aa10.76□□□□□ -0.69
TPM4-209ENST00000588483 LRSAM1Q6UWE0 723 aa10.76□□□□□ -0.69
TPM4-209ENST00000588483 PHLDB2Q86SQ0 1253 aa10.76□□□□□ -0.69
TPM4-209ENST00000588483 CCDC185Q8N715 623 aa10.76□□□□□ -0.69
TPM4-209ENST00000588483 TRIM11Q96F44 468 aa10.76□□□□□ -0.69
TPM4-209ENST00000588483 GPR174Q9BXC1 333 aa10.76□□□□□ -0.69
TPM4-209ENST00000588483 NUSAP1Q9BXS6 441 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms