RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 TMEM110Q86TL2 294 aa11.98□□□□□ -0.49
LIG3-207ENST00000586119 CCDC117Q8IWD4 279 aaPredicted RBP11.98□□□□□ -0.49
LIG3-207ENST00000586119 TRIM59Q8IWR1 403 aa11.98□□□□□ -0.49
LIG3-207ENST00000586119 DEFB106AQ8N104 65 aa11.98□□□□□ -0.49
LIG3-207ENST00000586119 CCDC34Q96HJ3 373 aa11.98□□□□□ -0.49
LIG3-207ENST00000586119 INTS2Q9H0H0 1204 aaKnown RBP11.98□□□□□ -0.49
LIG3-207ENST00000586119 GDF3Q9NR23 364 aa11.98□□□□□ -0.49
LIG3-207ENST00000586119 CTNND2Q9UQB3 1225 aa11.98□□□□□ -0.49
LIG3-207ENST00000586119 PCDHGA1Q9Y5H4 931 aa11.98□□□□□ -0.49
LIG3-207ENST00000586119 SNX10Q9Y5X0 201 aa11.98□□□□□ -0.49
LIG3-207ENST00000586119 BECN2A8MW95 431 aa11.97□□□□□ -0.49
LIG3-207ENST00000586119 F5H5T6 163 aa11.97□□□□□ -0.49
LIG3-207ENST00000586119 TRIM38O00635 465 aa11.97□□□□□ -0.49
LIG3-207ENST00000586119 THAP12O43422 761 aa11.97□□□□□ -0.49
LIG3-207ENST00000586119 LATO43561 262 aa11.97□□□□□ -0.49
LIG3-207ENST00000586119 BNIP3LO60238 219 aa11.97□□□□□ -0.49
LIG3-207ENST00000586119 ADH1BP00325 375 aa11.97□□□□□ -0.49
LIG3-207ENST00000586119 APOEP02649 317 aa11.97□□□□□ -0.49
LIG3-207ENST00000586119 ACADSBP45954 432 aa11.97□□□□□ -0.49
LIG3-207ENST00000586119 RXRGP48443 463 aa11.97□□□□□ -0.49
LIG3-207ENST00000586119 PLK1P53350 603 aa11.97□□□□□ -0.49
LIG3-207ENST00000586119 TAS2R38P59533 333 aa11.97□□□□□ -0.49
LIG3-207ENST00000586119 YWHAZP63104 245 aaKnown RBP11.97□□□□□ -0.49
LIG3-207ENST00000586119 GCNT1Q02742 428 aa11.97□□□□□ -0.49
LIG3-207ENST00000586119 CNTN1Q12860 1018 aa11.97□□□□□ -0.49
LIG3-207ENST00000586119 ACCSLQ4AC99 568 aa11.97□□□□□ -0.49
LIG3-207ENST00000586119 ZNF557Q8N988 423 aaPredicted RBP11.97□□□□□ -0.49
LIG3-207ENST00000586119 MFSD2AQ8NA29 543 aa11.97□□□□□ -0.49
LIG3-207ENST00000586119 BTN2A3PQ96KV6 586 aa11.97□□□□□ -0.49
LIG3-207ENST00000586119 MYOCQ99972 504 aa11.97□□□□□ -0.49
LIG3-207ENST00000586119 CRACR2AQ9BSW2 395 aa11.97□□□□□ -0.49
LIG3-207ENST00000586119 SRRTQ9BXP5 876 aaKnown RBP11.97□□□□□ -0.49
LIG3-207ENST00000586119 POPDC2Q9HBU9 364 aa11.97□□□□□ -0.49
LIG3-207ENST00000586119 ANLNQ9NQW6 1124 aa11.97□□□□□ -0.49
LIG3-207ENST00000586119 AK5Q9Y6K8 562 aa11.97□□□□□ -0.49
LIG3-207ENST00000586119 PTPRQQ9UMZ3 2332 aa11.97□□□□□ -0.49
LIG3-207ENST00000586119 K7ERQ8 282 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 P4HA2O15460 535 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 CNTN5O94779 1100 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 MT-CO1P00395 513 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 SLC9A1P19634 815 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 AUHQ13825 339 aaKnown RBP11.96□□□□□ -0.49
LIG3-207ENST00000586119 ELAVL3Q14576 367 aaKnown RBP11.96□□□□□ -0.49
LIG3-207ENST00000586119 DLG2Q15700 870 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 ARHGAP44Q17R89 818 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 INAVAQ3KP66 663 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 AGBL4Q5VU57 503 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 SFMBT2Q5VUG0 894 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 NAPEPLDQ6IQ20 393 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 Q6ZVU0 165 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 BEND5Q7L4P6 421 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 PRPF39Q86UA1 669 aaKnown RBP11.96□□□□□ -0.49
LIG3-207ENST00000586119 PASD1Q8IV76 773 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 SLC25A45Q8N413 288 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 ATP6V0D2Q8N8Y2 350 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 STK32AQ8WU08 396 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 FAM131CQ96AQ9 280 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 SKA1Q96BD8 255 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 TIGD1Q96MW7 591 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 CPXM1Q96SM3 734 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 FEM1AQ9BSK4 669 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 THAP9Q9H5L6 903 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.96□□□□□ -0.49
LIG3-207ENST00000586119 UCKL1Q9NWZ5 548 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 AJAP1Q9UKB5 411 aaPredicted RBP11.96□□□□□ -0.49
LIG3-207ENST00000586119 VANGL2Q9ULK5 521 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 PPM1HQ9ULR3 514 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 OR51B4Q9Y5P0 310 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 HS3ST4Q9Y661 456 aa11.96□□□□□ -0.49
LIG3-207ENST00000586119 TRPM6Q9BX84 2022 aa11.96□□□□□ -0.5
LIG3-207ENST00000586119 I6L893 689 aaPredicted RBP11.95□□□□□ -0.5
LIG3-207ENST00000586119 SLC31A1O15431 190 aa11.95□□□□□ -0.5
LIG3-207ENST00000586119 PLRG1O43660 514 aaKnown RBP11.95□□□□□ -0.5
LIG3-207ENST00000586119 SIGLEC6O43699 453 aa11.95□□□□□ -0.5
LIG3-207ENST00000586119 SNAP91O60641 907 aa11.95□□□□□ -0.5
LIG3-207ENST00000586119 AFPP02771 609 aaKnown RBP11.95□□□□□ -0.5
LIG3-207ENST00000586119 CTSLP07711 333 aa11.95□□□□□ -0.5
LIG3-207ENST00000586119 PRLRP16471 622 aa11.95□□□□□ -0.5
LIG3-207ENST00000586119 CKMT2P17540 419 aa11.95□□□□□ -0.5
LIG3-207ENST00000586119 TFE3P19532 575 aaPredicted RBP11.95□□□□□ -0.5
LIG3-207ENST00000586119 PTMSP20962 102 aa11.95□□□□□ -0.5
LIG3-207ENST00000586119 GNA15P30679 374 aa11.95□□□□□ -0.5
LIG3-207ENST00000586119 NNMTP40261 264 aa11.95□□□□□ -0.5
LIG3-207ENST00000586119 USP8P40818 1118 aa11.95□□□□□ -0.5
LIG3-207ENST00000586119 ABCG1P45844 678 aa11.95□□□□□ -0.5
LIG3-207ENST00000586119 ARRB1P49407 418 aaPredicted RBP11.95□□□□□ -0.5
LIG3-207ENST00000586119 INSM1Q01101 510 aaPredicted RBP11.95□□□□□ -0.5
LIG3-207ENST00000586119 CETN1Q12798 172 aa11.95□□□□□ -0.5
LIG3-207ENST00000586119 SFSWAPQ12872 951 aaKnown RBP11.95□□□□□ -0.5
LIG3-207ENST00000586119 NME3Q13232 169 aa11.95□□□□□ -0.5
LIG3-207ENST00000586119 PDCLQ13371 301 aa11.95□□□□□ -0.5
LIG3-207ENST00000586119 STIM1Q13586 685 aa11.95□□□□□ -0.5
LIG3-207ENST00000586119 MORC3Q14149 939 aa11.95□□□□□ -0.5
LIG3-207ENST00000586119 C6orf118Q5T5N4 469 aa11.95□□□□□ -0.5
LIG3-207ENST00000586119 FAM183BPQ6ZVS7 135 aa11.95□□□□□ -0.5
LIG3-207ENST00000586119 CREBRFQ8IUR6 639 aa11.95□□□□□ -0.5
LIG3-207ENST00000586119 ELOA2Q8IYF1 753 aaPredicted RBP11.95□□□□□ -0.5
LIG3-207ENST00000586119 OR8D1Q8WZ84 308 aa11.95□□□□□ -0.5
LIG3-207ENST00000586119 RNF34Q969K3 372 aa11.95□□□□□ -0.5
LIG3-207ENST00000586119 ARRDC3Q96B67 414 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms