RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 VANGL2Q9ULK5 521 aa18.37■□□□□ 0.53
ERBB2-221ENST00000584888 CEP295Q9C0D2 2601 aa18.37■□□□□ 0.53
ERBB2-221ENST00000584888 IGLV3-10A0A075B6K4 115 aa18.36■□□□□ 0.53
ERBB2-221ENST00000584888 HYAL3O43820 417 aaPredicted RBP18.36■□□□□ 0.53
ERBB2-221ENST00000584888 SH3BP5O60239 455 aa18.36■□□□□ 0.53
ERBB2-221ENST00000584888 GJB6O95452 261 aa18.36■□□□□ 0.53
ERBB2-221ENST00000584888 SERPINC1P01008 464 aa18.36■□□□□ 0.53
ERBB2-221ENST00000584888 CALB1P05937 261 aa18.36■□□□□ 0.53
ERBB2-221ENST00000584888 ACSL1P33121 698 aa18.36■□□□□ 0.53
ERBB2-221ENST00000584888 GGCXP38435 758 aa18.36■□□□□ 0.53
ERBB2-221ENST00000584888 PTPN9P43378 593 aa18.36■□□□□ 0.53
ERBB2-221ENST00000584888 RPS14P62263 151 aaKnown RBP18.36■□□□□ 0.53
ERBB2-221ENST00000584888 HNRNPDQ14103 355 aaKnown RBP18.36■□□□□ 0.53
ERBB2-221ENST00000584888 NUMA1Q14980 2115 aa18.36■□□□□ 0.53
ERBB2-221ENST00000584888 RAB6CQ53S08 254 aa18.36■□□□□ 0.53
ERBB2-221ENST00000584888 ACBD5Q5T8D3 534 aaPredicted RBP18.36■□□□□ 0.53
ERBB2-221ENST00000584888 ACAD10Q6JQN1 1059 aa18.36■□□□□ 0.53
ERBB2-221ENST00000584888 SND1Q7KZF4 910 aaKnown RBP eCLIP18.36■□□□□ 0.53
ERBB2-221ENST00000584888 C3orf20Q8ND61 904 aa18.36■□□□□ 0.53
ERBB2-221ENST00000584888 OR52K2Q8NGK3 314 aa18.36■□□□□ 0.53
ERBB2-221ENST00000584888 C1orf216Q8TAB5 229 aa18.36■□□□□ 0.53
ERBB2-221ENST00000584888 CAMK1GQ96NX5 476 aa18.36■□□□□ 0.53
ERBB2-221ENST00000584888 RPRD1AQ96P16 312 aaPredicted RBP18.36■□□□□ 0.53
ERBB2-221ENST00000584888 HAPLN3Q96S86 360 aa18.36■□□□□ 0.53
ERBB2-221ENST00000584888 TMEM121BQ9BXQ6 578 aaPredicted RBP18.36■□□□□ 0.53
ERBB2-221ENST00000584888 SIK2Q9H0K1 926 aa18.36■□□□□ 0.53
ERBB2-221ENST00000584888 RAB6CQ9H0N0 254 aa18.36■□□□□ 0.53
ERBB2-221ENST00000584888 MTG2Q9H4K7 406 aa18.36■□□□□ 0.53
ERBB2-221ENST00000584888 C6orf106Q9H6K1 298 aaPredicted RBP18.36■□□□□ 0.53
ERBB2-221ENST00000584888 FBRSQ9HAH7 460 aa18.36■□□□□ 0.53
ERBB2-221ENST00000584888 TMPRSS4Q9NRS4 437 aa18.36■□□□□ 0.53
ERBB2-221ENST00000584888 SUN2Q9UH99 717 aa18.36■□□□□ 0.53
ERBB2-221ENST00000584888 ERVW-1Q9UQF0 538 aa18.36■□□□□ 0.53
ERBB2-221ENST00000584888 TBC1D30Q9Y2I9 924 aa18.36■□□□□ 0.53
ERBB2-221ENST00000584888 PAXBP1Q9Y5B6 917 aa18.36■□□□□ 0.53
ERBB2-221ENST00000584888 OR51B4Q9Y5P0 310 aa18.36■□□□□ 0.53
ERBB2-221ENST00000584888 SNX10Q9Y5X0 201 aa18.36■□□□□ 0.53
ERBB2-221ENST00000584888 ITIH6Q6UXX5 1313 aa18.35■□□□□ 0.53
ERBB2-221ENST00000584888 SIGLEC16A6NMB1 481 aa18.35■□□□□ 0.53
ERBB2-221ENST00000584888 CLDN11O75508 207 aa18.35■□□□□ 0.53
ERBB2-221ENST00000584888 SRPRAP08240 638 aaKnown RBP18.35■□□□□ 0.53
ERBB2-221ENST00000584888 KRT3P12035 628 aa18.35■□□□□ 0.53
ERBB2-221ENST00000584888 PDGFRAP16234 1089 aa18.35■□□□□ 0.53
ERBB2-221ENST00000584888 MZF1P28698 734 aaPredicted RBP18.35■□□□□ 0.53
ERBB2-221ENST00000584888 RDXP35241 583 aaKnown RBP18.35■□□□□ 0.53
ERBB2-221ENST00000584888 RFC1P35251 1148 aaPredicted RBP18.35■□□□□ 0.53
ERBB2-221ENST00000584888 CTSOP43234 321 aaPredicted RBP18.35■□□□□ 0.53
ERBB2-221ENST00000584888 VASPP50552 380 aaPredicted RBP18.35■□□□□ 0.53
ERBB2-221ENST00000584888 ZBTB16Q05516 673 aa18.35■□□□□ 0.53
ERBB2-221ENST00000584888 PPP1R15BQ5SWA1 713 aa18.35■□□□□ 0.53
ERBB2-221ENST00000584888 WDR59Q6PJI9 974 aa18.35■□□□□ 0.53
ERBB2-221ENST00000584888 CCDC117Q8IWD4 279 aaPredicted RBP18.35■□□□□ 0.53
ERBB2-221ENST00000584888 MCOLN2Q8IZK6 566 aa18.35■□□□□ 0.53
ERBB2-221ENST00000584888 TAS2R14Q9NYV8 317 aa18.35■□□□□ 0.53
ERBB2-221ENST00000584888 CHD5Q8TDI0 1954 aa18.34■□□□□ 0.53
ERBB2-221ENST00000584888 CNTN5O94779 1100 aa18.34■□□□□ 0.53
ERBB2-221ENST00000584888 DNTTP04053 509 aa18.34■□□□□ 0.53
ERBB2-221ENST00000584888 TNFAIP3P21580 790 aa18.34■□□□□ 0.53
ERBB2-221ENST00000584888 CDH4P55283 916 aa18.34■□□□□ 0.53
ERBB2-221ENST00000584888 OXCT1P55809 520 aa18.34■□□□□ 0.53
ERBB2-221ENST00000584888 UBASH3AP57075 661 aa18.34■□□□□ 0.53
ERBB2-221ENST00000584888 TPM4P67936 248 aa18.34■□□□□ 0.53
ERBB2-221ENST00000584888 ECT2LQ008S8 904 aa18.34■□□□□ 0.53
ERBB2-221ENST00000584888 BNC1Q01954 994 aa18.34■□□□□ 0.53
ERBB2-221ENST00000584888 C15orf59Q2T9L4 293 aaPredicted RBP18.34■□□□□ 0.53
ERBB2-221ENST00000584888 HNRNPA1L2Q32P51 320 aaKnown RBP18.34■□□□□ 0.53
ERBB2-221ENST00000584888 ALFQ53S48 1182 aa18.34■□□□□ 0.53
ERBB2-221ENST00000584888 STRADAQ7RTN6 431 aa18.34■□□□□ 0.53
ERBB2-221ENST00000584888 ZNF571Q7Z3V5 609 aaPredicted RBP18.34■□□□□ 0.53
ERBB2-221ENST00000584888 SNX19Q92543 992 aa18.34■□□□□ 0.53
ERBB2-221ENST00000584888 GATA6Q92908 595 aa18.34■□□□□ 0.53
ERBB2-221ENST00000584888 VCPIP1Q96JH7 1222 aa18.34■□□□□ 0.53
ERBB2-221ENST00000584888 FEM1AQ9BSK4 669 aa18.34■□□□□ 0.53
ERBB2-221ENST00000584888 BTBD1Q9H0C5 482 aa18.34■□□□□ 0.53
ERBB2-221ENST00000584888 IL21RQ9HBE5 538 aa18.34■□□□□ 0.53
ERBB2-221ENST00000584888 ZNF212Q9UDV6 495 aa18.34■□□□□ 0.53
ERBB2-221ENST00000584888 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.34■□□□□ 0.53
ERBB2-221ENST00000584888 NEUROG3Q9Y4Z2 214 aa18.34■□□□□ 0.53
ERBB2-221ENST00000584888 A0A1W2PQJ5 194 aa18.33■□□□□ 0.52
ERBB2-221ENST00000584888 MOCS3O95396 460 aa18.33■□□□□ 0.52
ERBB2-221ENST00000584888 SEMA4FO95754 770 aa18.33■□□□□ 0.52
ERBB2-221ENST00000584888 SDC4P31431 198 aa18.33■□□□□ 0.52
ERBB2-221ENST00000584888 ADRA1BP35368 520 aa18.33■□□□□ 0.52
ERBB2-221ENST00000584888 ST8SIA6P61647 398 aa18.33■□□□□ 0.52
ERBB2-221ENST00000584888 ATP11AP98196 1134 aa18.33■□□□□ 0.52
ERBB2-221ENST00000584888 NRG1Q02297 640 aaPredicted RBP18.33■□□□□ 0.52
ERBB2-221ENST00000584888 TRIP6Q15654 476 aaKnown RBP18.33■□□□□ 0.52
ERBB2-221ENST00000584888 ASIC2Q16515 512 aa18.33■□□□□ 0.52
ERBB2-221ENST00000584888 SFMBT2Q5VUG0 894 aa18.33■□□□□ 0.52
ERBB2-221ENST00000584888 ZNF776Q68DI1 518 aaPredicted RBP18.33■□□□□ 0.52
ERBB2-221ENST00000584888 FAM131BQ86XD5 332 aa18.33■□□□□ 0.52
ERBB2-221ENST00000584888 NAXDQ8IW45 347 aa18.33■□□□□ 0.52
ERBB2-221ENST00000584888 KDF1Q8NAX2 398 aaPredicted RBP18.33■□□□□ 0.52
ERBB2-221ENST00000584888 RSPH9Q9H1X1 276 aaPredicted RBP18.33■□□□□ 0.52
ERBB2-221ENST00000584888 HAUS4Q9H6D7 363 aa18.33■□□□□ 0.52
ERBB2-221ENST00000584888 GAREM1Q9H706 876 aa18.33■□□□□ 0.52
ERBB2-221ENST00000584888 SEPT11Q9NVA2 429 aaKnown RBP18.33■□□□□ 0.52
ERBB2-221ENST00000584888 SLCO3A1Q9UIG8 710 aa18.33■□□□□ 0.52
ERBB2-221ENST00000584888 PCDHB9Q9Y5E1 797 aa18.33■□□□□ 0.52
ERBB2-221ENST00000584888 SLCO1B1Q9Y6L6 691 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms