RNA–Protein interactions for RNA: ENST00000584668.5

SRSF1-207, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 758 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-207ENST00000584668 LZTS3O60299 673 aaPredicted RBP8.72□□□□□ -1.01
SRSF1-207ENST00000584668 PIAS2O75928 621 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 CD2BP2O95400 341 aaKnown RBP8.72□□□□□ -1.01
SRSF1-207ENST00000584668 LTFP02788 710 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 LCP1P13796 627 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 HNRNPA2B1P22626 353 aaKnown RBP8.72□□□□□ -1.01
SRSF1-207ENST00000584668 TBXAS1P24557 533 aaPredicted RBP8.72□□□□□ -1.01
SRSF1-207ENST00000584668 SLC6A4P31645 630 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 DRD3P35462 400 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 ME1P48163 572 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 RAD23BP54727 409 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 DAOAP59103 153 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 MTA1Q13330 715 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 CUL4BQ13620 913 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 STILQ15468 1287 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 NFIL3Q16649 462 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 ISXQ2M1V0 245 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 ACCSLQ4AC99 568 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 MS4A13Q5J8X5 152 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 RABGAP1LQ5R372 815 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 ZSCAN30Q86W11 494 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 CHSY1Q86X52 802 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 ZSCAN1Q8NBB4 408 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 KIAA0895Q8NCT3 520 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 WDR36Q8NI36 951 aaKnown RBP8.72□□□□□ -1.01
SRSF1-207ENST00000584668 TATDN2Q93075 761 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 PPP1R16AQ96I34 528 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 APOLD1Q96LR9 279 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 PRICKLE1Q96MT3 831 aaPredicted RBP8.72□□□□□ -1.01
SRSF1-207ENST00000584668 CCNL2Q96S94 520 aaPredicted RBP8.72□□□□□ -1.01
SRSF1-207ENST00000584668 KCTD10Q9H3F6 313 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 MTG2Q9H4K7 406 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 RAB20Q9NX57 234 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 ARHGAP20Q9P2F6 1191 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 TRAF3IP3Q9Y228 551 aa8.72□□□□□ -1.01
SRSF1-207ENST00000584668 UBR5O95071 2799 aaPredicted RBP8.72□□□□□ -1.01
SRSF1-207ENST00000584668 A6NNZ2 444 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 C10orf142B7Z368 130 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 TMX2-CTNND1H3BSU7 103 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 PYCARD-AS1I3L0S3 204 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 SCAMP1O15126 338 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 RTN2O75298 545 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 GJB6O95452 261 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 MOCS2O96007 188 aaPredicted RBP8.71□□□□□ -1.02
SRSF1-207ENST00000584668 ITGB2P05107 769 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 ITGA2BP08514 1039 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 EPB41P11171 864 aaKnown RBP8.71□□□□□ -1.02
SRSF1-207ENST00000584668 VDRP11473 427 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 RPS24P62847 133 aaKnown RBP8.71□□□□□ -1.02
SRSF1-207ENST00000584668 PPP3CAQ08209 521 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 STK4Q13043 487 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 EIF3IQ13347 325 aaKnown RBP8.71□□□□□ -1.02
SRSF1-207ENST00000584668 CUL4AQ13619 759 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 NR0B2Q15466 257 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 POM121L1PQ3SYA9 428 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 C8orf34Q49A92 452 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 KIAA1614Q5VZ46 1190 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 FOXR1Q6PIV2 292 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 SHC4Q6S5L8 630 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 USP53Q70EK8 1073 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 BHLHA9Q7RTU4 235 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 PTAR1Q7Z6K3 402 aaPredicted RBP8.71□□□□□ -1.02
SRSF1-207ENST00000584668 SLC25A45Q8N413 288 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 TMEM145Q8NBT3 493 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 ERCC4Q92889 916 aaPredicted RBP8.71□□□□□ -1.02
SRSF1-207ENST00000584668 PTPRN2Q92932 1015 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 NAT6Q93015 286 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 FAM131CQ96AQ9 280 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 CCDC34Q96HJ3 373 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 INTS4Q96HW7 963 aaKnown RBP8.71□□□□□ -1.02
SRSF1-207ENST00000584668 LMLNQ96KR4 655 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 BTN2A3PQ96KV6 586 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 RPL10LQ96L21 214 aaKnown RBP8.71□□□□□ -1.02
SRSF1-207ENST00000584668 SLC46A1Q96NT5 459 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 FAM129BQ96TA1 746 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 DNAJC28Q9NX36 388 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 SEPT10Q9P0V9 454 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 USP25Q9UHP3 1055 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 ATXN7L1Q9ULK2 861 aaPredicted RBP8.71□□□□□ -1.02
SRSF1-207ENST00000584668 COL12A1Q99715 3063 aa8.71□□□□□ -1.02
SRSF1-207ENST00000584668 CCDC187A0A096LP49 1063 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.7□□□□□ -1.02
SRSF1-207ENST00000584668 GOLGA6L7A0A1B0GV03 622 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 TCAF2A6NFQ2 919 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 M0QYV0 167 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 SLC31A1O15431 190 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 SLC2A3P11169 496 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 CASP1P29466 404 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 CTSOP43234 321 aaPredicted RBP8.7□□□□□ -1.02
SRSF1-207ENST00000584668 RABIFP47224 123 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 VASPP50552 380 aaPredicted RBP8.7□□□□□ -1.02
SRSF1-207ENST00000584668 ZNF177Q13360 481 aaPredicted RBP8.7□□□□□ -1.02
SRSF1-207ENST00000584668 ADAM9Q13443 819 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 CUL2Q13617 745 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 SPIDRQ14159 915 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 DCAF6Q58WW2 860 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 AGBL4Q5VU57 503 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 EFL1Q7Z2Z2 1120 aaKnown RBP8.7□□□□□ -1.02
SRSF1-207ENST00000584668 CLEC14AQ86T13 490 aa8.7□□□□□ -1.02
SRSF1-207ENST00000584668 PARGQ86W56 976 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms