RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 IPO11Q9UI26 975 aaKnown RBP19■□□□□ 0.63
PRKCA-203ENST00000578063 RANBP2P49792 3224 aaKnown RBP18.99■□□□□ 0.63
PRKCA-203ENST00000578063 E7EVH7 732 aa18.99■□□□□ 0.63
PRKCA-203ENST00000578063 LEFTY2O00292 366 aa18.99■□□□□ 0.63
PRKCA-203ENST00000578063 MATN3O15232 486 aa18.99■□□□□ 0.63
PRKCA-203ENST00000578063 TMEM63AO94886 807 aa18.99■□□□□ 0.63
PRKCA-203ENST00000578063 TPSB2P20231 275 aa18.99■□□□□ 0.63
PRKCA-203ENST00000578063 ARL4CP56559 192 aa18.99■□□□□ 0.63
PRKCA-203ENST00000578063 RPS24P62847 133 aaKnown RBP18.99■□□□□ 0.63
PRKCA-203ENST00000578063 POLD3Q15054 466 aaPredicted RBP18.99■□□□□ 0.63
PRKCA-203ENST00000578063 TPSAB1Q15661 275 aa18.99■□□□□ 0.63
PRKCA-203ENST00000578063 HIF1AQ16665 826 aa18.99■□□□□ 0.63
PRKCA-203ENST00000578063 PARP6Q2NL67 630 aa18.99■□□□□ 0.63
PRKCA-203ENST00000578063 ANO4Q32M45 955 aa18.99■□□□□ 0.63
PRKCA-203ENST00000578063 TEX44Q53QW1 395 aa18.99■□□□□ 0.63
PRKCA-203ENST00000578063 C6orf118Q5T5N4 469 aa18.99■□□□□ 0.63
PRKCA-203ENST00000578063 ARHGAP36Q6ZRI8 547 aa18.99■□□□□ 0.63
PRKCA-203ENST00000578063 CENPUQ71F23 418 aa18.99■□□□□ 0.63
PRKCA-203ENST00000578063 PID1Q7Z2X4 250 aa18.99■□□□□ 0.63
PRKCA-203ENST00000578063 HJURPQ8NCD3 748 aaPredicted RBP18.99■□□□□ 0.63
PRKCA-203ENST00000578063 RBM15Q96T37 977 aaKnown RBP eCLIP18.99■□□□□ 0.63
PRKCA-203ENST00000578063 PABPC3Q9H361 631 aaKnown RBP18.99■□□□□ 0.63
PRKCA-203ENST00000578063 DOCK4Q8N1I0 1966 aa18.99■□□□□ 0.63
PRKCA-203ENST00000578063 GOLGA6BA6NDN3 693 aa18.98■□□□□ 0.63
PRKCA-203ENST00000578063 GFRA2O00451 464 aa18.98■□□□□ 0.63
PRKCA-203ENST00000578063 NTHL1P78549 312 aa18.98■□□□□ 0.63
PRKCA-203ENST00000578063 ZBTB17Q13105 803 aa18.98■□□□□ 0.63
PRKCA-203ENST00000578063 UAP1Q16222 522 aaPredicted RBP18.98■□□□□ 0.63
PRKCA-203ENST00000578063 FAXCQ5TGI0 409 aa18.98■□□□□ 0.63
PRKCA-203ENST00000578063 SETD3Q86TU7 594 aaPredicted RBP18.98■□□□□ 0.63
PRKCA-203ENST00000578063 CPXM2Q8N436 756 aa18.98■□□□□ 0.63
PRKCA-203ENST00000578063 CEP41Q9BYV8 373 aa18.98■□□□□ 0.63
PRKCA-203ENST00000578063 MAGEH1Q9H213 219 aa18.98■□□□□ 0.63
PRKCA-203ENST00000578063 EIF2B3Q9NR50 452 aaKnown RBP18.98■□□□□ 0.63
PRKCA-203ENST00000578063 MRPS23Q9Y3D9 190 aaKnown RBP18.98■□□□□ 0.63
PRKCA-203ENST00000578063 ATG2AQ2TAZ0 1938 aa18.98■□□□□ 0.63
PRKCA-203ENST00000578063 MYO7AQ13402 2215 aa18.98■□□□□ 0.63
PRKCA-203ENST00000578063 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.97■□□□□ 0.63
PRKCA-203ENST00000578063 TCRBV7S3A2A0A539 114 aa18.97■□□□□ 0.63
PRKCA-203ENST00000578063 TRDMT1O14717 391 aaKnown RBP18.97■□□□□ 0.63
PRKCA-203ENST00000578063 EIF3HO15372 352 aaKnown RBP eCLIP18.97■□□□□ 0.635e-7■■□□□ 12.6
PRKCA-203ENST00000578063 APRTP07741 180 aa18.97■□□□□ 0.63
PRKCA-203ENST00000578063 CCNB1P14635 433 aa18.97■□□□□ 0.63
PRKCA-203ENST00000578063 CDK16Q00536 496 aa18.97■□□□□ 0.63
PRKCA-203ENST00000578063 GPS2Q13227 327 aa18.97■□□□□ 0.63
PRKCA-203ENST00000578063 ZNF177Q13360 481 aaPredicted RBP18.97■□□□□ 0.63
PRKCA-203ENST00000578063 CHRDL2Q6WN34 429 aa18.97■□□□□ 0.63
PRKCA-203ENST00000578063 PDIK1LQ8N165 341 aa18.97■□□□□ 0.63
PRKCA-203ENST00000578063 MCUQ8NE86 351 aa18.97■□□□□ 0.63
PRKCA-203ENST00000578063 VN1R2Q8NFZ6 395 aa18.97■□□□□ 0.63
PRKCA-203ENST00000578063 ZSCAN18Q8TBC5 510 aaPredicted RBP18.97■□□□□ 0.63
PRKCA-203ENST00000578063 SH3RF2Q8TEC5 729 aa18.97■□□□□ 0.63
PRKCA-203ENST00000578063 MAML1Q92585 1016 aa18.97■□□□□ 0.63
PRKCA-203ENST00000578063 TEKT5Q96M29 485 aa18.97■□□□□ 0.63
PRKCA-203ENST00000578063 RUFY1Q96T51 708 aa18.97■□□□□ 0.63
PRKCA-203ENST00000578063 IL12RB2Q99665 862 aa18.97■□□□□ 0.63
PRKCA-203ENST00000578063 GBA3Q9H227 469 aa18.97■□□□□ 0.63
PRKCA-203ENST00000578063 SP110Q9HB58 689 aa18.97■□□□□ 0.63
PRKCA-203ENST00000578063 E2F8A0AVK6 867 aa18.97■□□□□ 0.63
PRKCA-203ENST00000578063 GOLGA8MH3BSY2 632 aa18.97■□□□□ 0.63
PRKCA-203ENST00000578063 RFXAPO00287 272 aa18.97■□□□□ 0.63
PRKCA-203ENST00000578063 TSPAN3O60637 253 aa18.97■□□□□ 0.63
PRKCA-203ENST00000578063 JCHAINP01591 159 aa18.97■□□□□ 0.63
PRKCA-203ENST00000578063 PSMB4P28070 264 aa18.97■□□□□ 0.63
PRKCA-203ENST00000578063 SGSHP51688 502 aa18.97■□□□□ 0.63
PRKCA-203ENST00000578063 IQCKQ8N0W5 287 aa18.97■□□□□ 0.63
PRKCA-203ENST00000578063 PWWP2AQ96N64 755 aa18.97■□□□□ 0.63
PRKCA-203ENST00000578063 CDC42EP4Q9H3Q1 356 aaKnown RBP18.97■□□□□ 0.63
PRKCA-203ENST00000578063 NSUN3Q9H649 340 aaKnown RBP18.97■□□□□ 0.63
PRKCA-203ENST00000578063 DNAJC17Q9NVM6 304 aaKnown RBP18.97■□□□□ 0.63
PRKCA-203ENST00000578063 RSPH14Q9UHP6 348 aa18.97■□□□□ 0.63
PRKCA-203ENST00000578063 TBC1D30Q9Y2I9 924 aa18.97■□□□□ 0.63
PRKCA-203ENST00000578063 ILVBLA1L0T0 632 aa18.96■□□□□ 0.63
PRKCA-203ENST00000578063 ZBTB24O43167 697 aaPredicted RBP18.96■□□□□ 0.63
PRKCA-203ENST00000578063 RHOCP08134 193 aa18.96■□□□□ 0.63
PRKCA-203ENST00000578063 TCF3P15923 654 aa18.96■□□□□ 0.63
PRKCA-203ENST00000578063 ETFBP38117 255 aa18.96■□□□□ 0.63
PRKCA-203ENST00000578063 LMAN1P49257 510 aa18.96■□□□□ 0.63
PRKCA-203ENST00000578063 GNA12Q03113 381 aa18.96■□□□□ 0.63
PRKCA-203ENST00000578063 IL10RBQ08334 325 aa18.96■□□□□ 0.63
PRKCA-203ENST00000578063 SERINC3Q13530 473 aa18.96■□□□□ 0.63
PRKCA-203ENST00000578063 DENND2CQ68D51 928 aa18.96■□□□□ 0.63
PRKCA-203ENST00000578063 TMC5Q6UXY8 1006 aa18.96■□□□□ 0.63
PRKCA-203ENST00000578063 ZNF783Q6ZMS7 281 aa18.96■□□□□ 0.63
PRKCA-203ENST00000578063 ZNF354CQ86Y25 554 aa18.96■□□□□ 0.63
PRKCA-203ENST00000578063 BBS7Q8IWZ6 715 aa18.96■□□□□ 0.63
PRKCA-203ENST00000578063 C12orf76Q8N812 135 aaPredicted RBP18.96■□□□□ 0.63
PRKCA-203ENST00000578063 TTC16Q8NEE8 873 aa18.96■□□□□ 0.63
PRKCA-203ENST00000578063 NSMCE1Q8WV22 266 aa18.96■□□□□ 0.63
PRKCA-203ENST00000578063 USP13Q92995 863 aaPredicted RBP18.96■□□□□ 0.63
PRKCA-203ENST00000578063 TMA16Q96EY4 203 aaKnown RBP18.96■□□□□ 0.63
PRKCA-203ENST00000578063 AGAP3Q96P47 875 aa18.96■□□□□ 0.63
PRKCA-203ENST00000578063 SMG9Q9H0W8 520 aaKnown RBP18.96■□□□□ 0.63
PRKCA-203ENST00000578063 SEMA4AQ9H3S1 761 aa18.96■□□□□ 0.63
PRKCA-203ENST00000578063 SAYSD1Q9NPB0 183 aa18.96■□□□□ 0.63
PRKCA-203ENST00000578063 TDP1Q9NUW8 608 aa18.96■□□□□ 0.63
PRKCA-203ENST00000578063 E7ESA3 106 aa18.95■□□□□ 0.62
PRKCA-203ENST00000578063 SCAMP3O14828 347 aaKnown RBP18.95■□□□□ 0.62
PRKCA-203ENST00000578063 RIPK2O43353 540 aa18.95■□□□□ 0.62
PRKCA-203ENST00000578063 NEBLO76041 1014 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms