RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 PPP1R36Q96LQ0 422 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 GLIS2Q9BZE0 524 aaPredicted RBP17.16■□□□□ 0.34
LITAF-209ENST00000571688 MORF4L1Q9UBU8 362 aa17.16■□□□□ 0.34
LITAF-209ENST00000571688 RBM47A0AV96 593 aaKnown RBP17.15■□□□□ 0.34
LITAF-209ENST00000571688 TCAF2A6NFQ2 919 aa17.15■□□□□ 0.34
LITAF-209ENST00000571688 K7EPI3 171 aa17.15■□□□□ 0.34
LITAF-209ENST00000571688 CLASP2O75122 1294 aaKnown RBP17.15■□□□□ 0.34
LITAF-209ENST00000571688 MCF2P10911 925 aa17.15■□□□□ 0.34
LITAF-209ENST00000571688 PDGFRAP16234 1089 aa17.15■□□□□ 0.34
LITAF-209ENST00000571688 HK2P52789 917 aa17.15■□□□□ 0.34
LITAF-209ENST00000571688 TRIM25Q14258 630 aaKnown RBP17.15■□□□□ 0.34
LITAF-209ENST00000571688 CDO1Q16878 200 aa17.15■□□□□ 0.34
LITAF-209ENST00000571688 DUOXA2Q1HG44 320 aa17.15■□□□□ 0.34
LITAF-209ENST00000571688 TMEM198Q66K66 360 aa17.15■□□□□ 0.34
LITAF-209ENST00000571688 NANOGP8Q6NSW7 305 aa17.15■□□□□ 0.34
LITAF-209ENST00000571688 DCLK2Q8N568 766 aa17.15■□□□□ 0.34
LITAF-209ENST00000571688 CHPT1Q8WUD6 406 aa17.15■□□□□ 0.34
LITAF-209ENST00000571688 SREK1Q8WXA9 508 aaKnown RBP17.15■□□□□ 0.34
LITAF-209ENST00000571688 DUS3LQ96G46 650 aaKnown RBP17.15■□□□□ 0.34
LITAF-209ENST00000571688 NPAS2Q99743 824 aa17.15■□□□□ 0.34
LITAF-209ENST00000571688 PORCNQ9H237 461 aa17.15■□□□□ 0.34
LITAF-209ENST00000571688 ANKRD31Q8N7Z5 1873 aa17.15■□□□□ 0.34
LITAF-209ENST00000571688 TRIM64A6NGJ6 449 aa17.15■□□□□ 0.34
LITAF-209ENST00000571688 GRID2O43424 1007 aa17.15■□□□□ 0.34
LITAF-209ENST00000571688 BAIAP3O94812 1187 aa17.15■□□□□ 0.34
LITAF-209ENST00000571688 ZBTB11O95625 1053 aaPredicted RBP17.15■□□□□ 0.34
LITAF-209ENST00000571688 RAP1GAPP47736 663 aa17.15■□□□□ 0.34
LITAF-209ENST00000571688 RXRGP48443 463 aa17.15■□□□□ 0.34
LITAF-209ENST00000571688 NSUN2Q08J23 767 aaKnown RBP eCLIP17.15■□□□□ 0.34
LITAF-209ENST00000571688 BOLA3Q53S33 107 aa17.15■□□□□ 0.34
LITAF-209ENST00000571688 HMBOX1Q6NT76 420 aa17.15■□□□□ 0.34
LITAF-209ENST00000571688 PTAR1Q7Z6K3 402 aaPredicted RBP17.15■□□□□ 0.34
LITAF-209ENST00000571688 CPXCR1Q8N123 301 aa17.15■□□□□ 0.34
LITAF-209ENST00000571688 ZNF420Q8TAQ5 688 aaPredicted RBP17.15■□□□□ 0.34
LITAF-209ENST00000571688 TFAP2CQ92754 450 aa17.15■□□□□ 0.34
LITAF-209ENST00000571688 CIB1Q99828 191 aa17.15■□□□□ 0.34
LITAF-209ENST00000571688 RMI1Q9H9A7 625 aa17.15■□□□□ 0.34
LITAF-209ENST00000571688 KIAA1522Q9P206 1035 aaPredicted RBP17.15■□□□□ 0.34
LITAF-209ENST00000571688 ADAM28Q9UKQ2 775 aa17.15■□□□□ 0.34
LITAF-209ENST00000571688 H3BMQ9 156 aa17.14■□□□□ 0.33
LITAF-209ENST00000571688 XPOTO43592 962 aaKnown RBP17.14■□□□□ 0.33
LITAF-209ENST00000571688 MICAL2O94851 1124 aa17.14■□□□□ 0.33
LITAF-209ENST00000571688 LTFP02788 710 aa17.14■□□□□ 0.33
LITAF-209ENST00000571688 RPL10P27635 214 aaKnown RBP17.14■□□□□ 0.33
LITAF-209ENST00000571688 RPL14P50914 215 aaKnown RBP17.14■□□□□ 0.33
LITAF-209ENST00000571688 CA9Q16790 459 aa17.14■□□□□ 0.33
LITAF-209ENST00000571688 DCAF6Q58WW2 860 aa17.14■□□□□ 0.33
LITAF-209ENST00000571688 GRTP1Q5TC63 336 aa17.14■□□□□ 0.33
LITAF-209ENST00000571688 CLEC14AQ86T13 490 aa17.14■□□□□ 0.33
LITAF-209ENST00000571688 HERC6Q8IVU3 1022 aa17.14■□□□□ 0.33
LITAF-209ENST00000571688 COG8Q96MW5 612 aa17.14■□□□□ 0.33
LITAF-209ENST00000571688 CPNE1Q99829 537 aa17.14■□□□□ 0.33
LITAF-209ENST00000571688 GPATCH1Q9BRR8 931 aaKnown RBP17.14■□□□□ 0.33
LITAF-209ENST00000571688 ZNF670Q9BS34 389 aa17.14■□□□□ 0.33
LITAF-209ENST00000571688 C20orf96Q9NUD7 363 aaPredicted RBP17.14■□□□□ 0.33
LITAF-209ENST00000571688 TXNDC16Q9P2K2 825 aa17.14■□□□□ 0.33
LITAF-209ENST00000571688 SNX13Q9Y5W8 968 aa17.14■□□□□ 0.33
LITAF-209ENST00000571688 TRIM64BA6NI03 449 aa17.14■□□□□ 0.33
LITAF-209ENST00000571688 KCNA2P16389 499 aa17.14■□□□□ 0.33
LITAF-209ENST00000571688 MGAT1P26572 445 aa17.14■□□□□ 0.33
LITAF-209ENST00000571688 GJA8P48165 433 aa17.14■□□□□ 0.33
LITAF-209ENST00000571688 ORC1Q13415 861 aa17.14■□□□□ 0.33
LITAF-209ENST00000571688 OGFOD2Q6N063 350 aa17.14■□□□□ 0.33
LITAF-209ENST00000571688 NIPAL1Q6NVV3 410 aa17.14■□□□□ 0.33
LITAF-209ENST00000571688 GPRASP2Q96D09 838 aa17.14■□□□□ 0.33
LITAF-209ENST00000571688 PCDHGA7Q9Y5G6 932 aa17.14■□□□□ 0.33
LITAF-209ENST00000571688 UBR3Q6ZT12 1888 aa17.14■□□□□ 0.33
LITAF-209ENST00000571688 TCRBV3S1A0A5B6 114 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 DCKP27707 260 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 SLC7A1P30825 629 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 ARL2P36404 184 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 GPD2P43304 727 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 SMAD1Q15797 465 aaKnown RBP17.13■□□□□ 0.33
LITAF-209ENST00000571688 XKR3Q5GH77 459 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 PPP4R4Q6NUP7 873 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 PRMT6Q96LA8 375 aaPredicted RBP17.13■□□□□ 0.33
LITAF-209ENST00000571688 QKIQ96PU8 341 aaKnown RBP eCLIP17.13■□□□□ 0.337e-9■■■■■ 34.6
LITAF-209ENST00000571688 MPHOSPH6Q99547 160 aaKnown RBP17.13■□□□□ 0.33
LITAF-209ENST00000571688 SNRNP25Q9BV90 132 aaKnown RBP17.13■□□□□ 0.33
LITAF-209ENST00000571688 NPLQ9BXD5 320 aaPredicted RBP17.13■□□□□ 0.33
LITAF-209ENST00000571688 DRC3Q9H069 523 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 PCDHAC1Q9H158 963 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 TMEM134Q9H6X4 195 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 RAVER2Q9HCJ3 691 aaKnown RBP17.13■□□□□ 0.33
LITAF-209ENST00000571688 PALMDQ9NP74 551 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 OXSMQ9NWU1 459 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 UTP6Q9NYH9 597 aaKnown RBP17.13■□□□□ 0.33
LITAF-209ENST00000571688 ADA2Q9NZK5 511 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 NXF1Q9UBU9 619 aaKnown RBP17.13■□□□□ 0.33
LITAF-209ENST00000571688 CDYLQ9Y232 598 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 POLRMTO00411 1230 aaKnown RBP17.13■□□□□ 0.33
LITAF-209ENST00000571688 STAMBPO95630 424 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 UGT1A6P19224 532 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 UGT1A1P22309 533 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 UGT1A4P22310 534 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 UGT1A3P35503 534 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 UGT1A5P35504 534 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 SESN2P58004 480 aaPredicted RBP17.13■□□□□ 0.33
LITAF-209ENST00000571688 PSME3P61289 254 aa17.13■□□□□ 0.33
LITAF-209ENST00000571688 GBE1Q04446 702 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms