RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	WNT16	Q9UBV4	365 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	TUBGCP4	Q9UGJ1	667 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	CDH7	Q9ULB5	785 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	KIF3A	Q9Y496	699 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	VPS13A	Q96RL7	3174 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	COL4A3	Q01955	1670 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	CFAP54	Q96N23	3096 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	EP300	Q09472	2414 aa	Predicted RBP	7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	WDR27	A2RRH5	827 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	PPEF2	O14830	753 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	CLDN3	O15551	220 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	TRAPPC3	O43617	180 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	PRICKLE3	O43900	615 aa	Predicted RBP	7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	PCDHGA12	O60330	932 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	TOM1L1	O75674	476 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	LY86	O95711	162 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	CXCL8	P10145	99 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	KCNE1	P15382	129 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	XPA	P23025	273 aa	Predicted RBP	7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	TNFSF9	P41273	254 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	MATR3	P43243	847 aa	Known RBP eCLIP	7.62	□□□□□ -1.19	6e-12	■■■■□ 21.9
MARK3-223	ENST00000561071	MTNR1B	P49286	362 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	ROR1	Q01973	937 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	KARS	Q15046	597 aa	Known RBP	7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	SLC5A9	Q2M3M2	681 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	PABPC1L	Q4VXU2	614 aa	Known RBP	7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	PDXDC1	Q6P996	788 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	USP49	Q70CQ1	688 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	HAUS6	Q7Z4H7	955 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	CCDC105	Q8IYK2	499 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	MYCT1	Q8N699	235 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	PIK3C3	Q8NEB9	887 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	GFM2	Q969S9	779 aa	Known RBP	7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	TCEAL4	Q96EI5	215 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	MCRS1	Q96EZ8	462 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	BICD1	Q96G01	975 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	REEP2	Q9BRK0	252 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	OSBPL6	Q9BZF3	934 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	PLA2G2F	Q9BZM2	168 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	IKZF4	Q9H2S9	585 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	ZHX3	Q9H4I2	956 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	C17orf75	Q9HAS0	396 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	CYP4F11	Q9HBI6	524 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	BLOC1S4	Q9NUP1	217 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	SLC38A7	Q9NVC3	462 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	FBXL5	Q9UKA1	691 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	PCDHGA9	Q9Y5G4	932 aa	Known RBP	7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	PCDHGA8	Q9Y5G5	932 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	PCDHGA7	Q9Y5G6	932 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	PCDHGA6	Q9Y5G7	932 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	PCDHGA3	Q9Y5H0	932 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	PCDHGA2	Q9Y5H1	932 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	GVINP1	Q7Z2Y8	2422 aa		7.62	□□□□□ -1.19
MARK3-223	ENST00000561071	ZNF292	O60281	2723 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	FAM186A	A6NE01	2351 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	NOTCH4	Q99466	2003 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	LACTBL1	A8MY62	500 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	TISP43	B9A030	160 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	PRRG1	O14668	218 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	ARHGAP6	O43182	974 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	TBC1D4	O60343	1298 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	ABLIM3	O94929	683 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	RHO	P08100	348 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	GAA	P10253	952 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	GLUL	P15104	373 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	GJA1	P17302	382 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	CEBPB	P17676	345 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	CD72	P21854	359 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	HOXA9	P31269	272 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	ELF1	P32519	619 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	RPL9	P32969	192 aa	Known RBP	7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	UBA7	P41226	1012 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	SESN2	P58004	480 aa	Predicted RBP	7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	MCL1	Q07820	350 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	ANGPT1	Q15389	498 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	PLEKHG6	Q3KR16	790 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	CTXN3	Q4LDR2	81 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	ARL6IP4	Q66PJ3	421 aa	Known RBP	7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	SLC8B1	Q6J4K2	584 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	FAM173B	Q6P4H8	233 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	ARHGEF18	Q6ZSZ5	1173 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	CLEC14A	Q86T13	490 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	ZNF461	Q8TAF7	563 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	TIPIN	Q9BVW5	301 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	ARHGEF3	Q9NR81	526 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	SLC2A4RG	Q9NR83	387 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	TBX20	Q9UMR3	447 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	MTF2	Q9Y483	593 aa	Predicted RBP	7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	GPR45	Q9Y5Y3	372 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	CLIC4	Q9Y696	253 aa		7.61	□□□□□ -1.19
MARK3-223	ENST00000561071	TTC26	A0AVF1	554 aa		7.6	□□□□□ -1.19
MARK3-223	ENST00000561071	VPS37C	A5D8V6	355 aa	Predicted RBP	7.6	□□□□□ -1.19
MARK3-223	ENST00000561071	PRR23A	A6NEV1	266 aa		7.6	□□□□□ -1.19
MARK3-223	ENST00000561071	ANKRD63	C9JTQ0	380 aa		7.6	□□□□□ -1.19
MARK3-223	ENST00000561071	PROB1	E7EW31	1015 aa		7.6	□□□□□ -1.19
MARK3-223	ENST00000561071		K7ENM7	598 aa		7.6	□□□□□ -1.19
MARK3-223	ENST00000561071	MATN2	O00339	956 aa		7.6	□□□□□ -1.19
MARK3-223	ENST00000561071	XPOT	O43592	962 aa	Known RBP	7.6	□□□□□ -1.19
MARK3-223	ENST00000561071	NRP2	O60462	931 aa		7.6	□□□□□ -1.19

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