RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 HPCAP84074 193 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 FOLH1Q04609 750 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 FASTKD3Q14CZ7 662 aaKnown RBP8.75□□□□□ -1.01
CCDC33-209ENST00000560565 NOMO1Q15155 1222 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 TEX44Q53QW1 395 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 BOLA3Q53S33 107 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 RABGAP1LQ5R372 815 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 FOXB2Q5VYV0 432 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 ARMC3Q5W041 872 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 PGM2L1Q6PCE3 622 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 SH2D5Q6ZV89 423 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 HERC6Q8IVU3 1022 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 NDUFAF2Q8N183 169 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 PQLC1Q8N2U9 271 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 SLC4A11Q8NBS3 891 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 TNIP2Q8NFZ5 429 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 RDH11Q8TC12 318 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 HM13Q8TCT9 377 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 PLEKHO2Q8TD55 490 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 ZNF606Q8WXB4 792 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 MYLIPQ8WY64 445 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 ZBTB45Q96K62 511 aaPredicted RBP8.75□□□□□ -1.01
CCDC33-209ENST00000560565 PWWP2AQ96N64 755 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 TSNARE1Q96NA8 513 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 MCEEQ96PE7 176 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 PLEKHG4BQ96PX9 1271 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 ZBED2Q9BTP6 218 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 NIF3L1Q9GZT8 377 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 CDT1Q9H211 546 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 NKX2-4Q9H2Z4 354 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 ASB7Q9H672 318 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 PLGRKTQ9HBL7 147 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 PALMDQ9NP74 551 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 VTI1BQ9UEU0 232 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 CHORDC1Q9UHD1 332 aaPredicted RBP8.75□□□□□ -1.01
CCDC33-209ENST00000560565 PTBP2Q9UKA9 531 aaKnown RBP8.75□□□□□ -1.01
CCDC33-209ENST00000560565 KIAA1257Q9ULG3 409 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 FAF1Q9UNN5 650 aaPredicted RBP8.75□□□□□ -1.01
CCDC33-209ENST00000560565 CHMP2BQ9UQN3 213 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 YBX2Q9Y2T7 364 aaKnown RBP8.75□□□□□ -1.01
CCDC33-209ENST00000560565 AP4S1Q9Y587 144 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 WASF2Q9Y6W5 498 aa8.75□□□□□ -1.01
CCDC33-209ENST00000560565 KMT2BQ9UMN6 2715 aaPredicted RBP8.74□□□□□ -1.01
CCDC33-209ENST00000560565 PTPRSQ13332 1948 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 BCLAF3A2AJT9 711 aaKnown RBP8.74□□□□□ -1.01
CCDC33-209ENST00000560565 CCDC162PA2VCL2 907 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 TLL1O43897 1013 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 TSPAN1O60635 241 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 NOL3O60936 208 aaKnown RBP8.74□□□□□ -1.01
CCDC33-209ENST00000560565 COQ9O75208 318 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 AMHP03971 560 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 EDN1P05305 212 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 KRT10P13645 584 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 ARF4P18085 180 aaPredicted RBP8.74□□□□□ -1.01
CCDC33-209ENST00000560565 CPOXP36551 454 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 MTTPP55157 894 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 MGAT3Q09327 533 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 TMEM62Q0P6H9 643 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 TBL3Q12788 808 aaKnown RBP8.74□□□□□ -1.01
CCDC33-209ENST00000560565 NCOA4Q13772 614 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 KCNJ11Q14654 390 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 RFTN1Q14699 578 aaPredicted RBP8.74□□□□□ -1.01
CCDC33-209ENST00000560565 MYBPC3Q14896 1274 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 GRIN2CQ14957 1233 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 DUOXA2Q1HG44 320 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 TCTN1Q2MV58 587 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 FNBP1LQ5T0N5 605 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 PPP2R2DQ66LE6 453 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 NOTUMQ6P988 496 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 SLC27A1Q6PCB7 646 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 UGT2A3Q6UWM9 527 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 CAPN12Q6ZSI9 719 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 CATSPER4Q7RTX7 472 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 KBTBD6Q86V97 674 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 PPM1NQ8N819 430 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 CMASQ8NFW8 434 aaPredicted RBP8.74□□□□□ -1.01
CCDC33-209ENST00000560565 RP9Q8TA86 221 aaKnown RBP8.74□□□□□ -1.01
CCDC33-209ENST00000560565 SPATA18Q8TC71 538 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 DEPDC1BQ8WUY9 529 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 ITPKCQ96DU7 683 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 MRRFQ96E11 262 aaKnown RBP8.74□□□□□ -1.01
CCDC33-209ENST00000560565 SERAC1Q96JX3 654 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 CNDP1Q96KN2 507 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 OSBPL11Q9BXB4 747 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 HAPLN2Q9GZV7 340 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 EBF3Q9H4W6 596 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 PDZD7Q9H5P4 517 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 MINDY3Q9H8M7 445 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 RPF1Q9H9Y2 349 aaKnown RBP8.74□□□□□ -1.01
CCDC33-209ENST00000560565 PLEKHA5Q9HAU0 1116 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 ARHGEF4Q9NR80 690 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 DNAAF2Q9NVR5 837 aaKnown RBP8.74□□□□□ -1.01
CCDC33-209ENST00000560565 NSMCE4AQ9NXX6 385 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 RSL24D1Q9UHA3 163 aaKnown RBP8.74□□□□□ -1.01
CCDC33-209ENST00000560565 DERAQ9Y315 318 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 SH3GLB1Q9Y371 365 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 TRPV2Q9Y5S1 764 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 SF3B1O75533 1304 aaKnown RBP eCLIP8.74□□□□□ -1.01
CCDC33-209ENST00000560565 REV3LO60673 3130 aa8.74□□□□□ -1.01
CCDC33-209ENST00000560565 C5orf42Q9H799 3197 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms