RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 GDAP1Q8TB36 358 aa6.45□□□□□ -1.38
USP8-210ENST00000560379 CFHR4Q92496 578 aa6.45□□□□□ -1.38
USP8-210ENST00000560379 USP6NLQ92738 828 aa6.45□□□□□ -1.38
USP8-210ENST00000560379 CNDP1Q96KN2 507 aa6.45□□□□□ -1.38
USP8-210ENST00000560379 CCDC43Q96MW1 224 aaKnown RBP6.45□□□□□ -1.38
USP8-210ENST00000560379 NTPCRQ9BSD7 190 aaKnown RBP6.45□□□□□ -1.38
USP8-210ENST00000560379 TACO1Q9BSH4 297 aaKnown RBP6.45□□□□□ -1.38
USP8-210ENST00000560379 HGH1Q9BTY7 390 aa6.45□□□□□ -1.38
USP8-210ENST00000560379 DDX23Q9BUQ8 820 aaKnown RBP6.45□□□□□ -1.38
USP8-210ENST00000560379 NACAP1Q9BZK3 213 aa6.45□□□□□ -1.38
USP8-210ENST00000560379 PABPC3Q9H361 631 aaKnown RBP6.45□□□□□ -1.38
USP8-210ENST00000560379 CHCHD3Q9NX63 227 aaKnown RBP6.45□□□□□ -1.38
USP8-210ENST00000560379 MCM9Q9NXL9 1143 aa6.45□□□□□ -1.38
USP8-210ENST00000560379 ARHGAP20Q9P2F6 1191 aa6.45□□□□□ -1.38
USP8-210ENST00000560379 CHORDC1Q9UHD1 332 aaPredicted RBP6.45□□□□□ -1.38
USP8-210ENST00000560379 MOSPD1Q9UJG1 213 aa6.45□□□□□ -1.38
USP8-210ENST00000560379 MID2Q9UJV3 735 aa6.45□□□□□ -1.38
USP8-210ENST00000560379 MTO1Q9Y2Z2 717 aaKnown RBP6.45□□□□□ -1.38
USP8-210ENST00000560379 TRIM17Q9Y577 477 aa6.45□□□□□ -1.38
USP8-210ENST00000560379 HCFC2Q9Y5Z7 792 aa6.45□□□□□ -1.38
USP8-210ENST00000560379 ACTL7AQ9Y615 435 aa6.45□□□□□ -1.38
USP8-210ENST00000560379 HS3ST4Q9Y661 456 aa6.45□□□□□ -1.38
USP8-210ENST00000560379 PLIN4Q96Q06 1357 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 PRSS29PA6NIE9 313 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 SPTLC2O15270 562 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 ZBTB14O43829 449 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 RASSF9O75901 435 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 IL18BPO95998 194 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 ASNSP08243 561 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 QDPRP09417 244 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 SKILP12757 684 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 NPPBP16860 134 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 PBLDP30039 288 aaPredicted RBP6.44□□□□□ -1.38
USP8-210ENST00000560379 MTHFRP42898 656 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 NKX3-2P78367 333 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 PRR5P85299 388 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 ZNF200P98182 395 aaPredicted RBP6.44□□□□□ -1.38
USP8-210ENST00000560379 PPATQ06203 517 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 SREBF2Q12772 1141 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 SLC14A1Q13336 389 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 PPIL2Q13356 520 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 MAPKAPK3Q16644 382 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 SBK1Q52WX2 424 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 ACAD10Q6JQN1 1059 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 C11orf88Q6PI97 169 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 DLK2Q6UY11 383 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 ETV3LQ6ZN32 361 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 PRRT2Q7Z6L0 340 aaPredicted RBP6.44□□□□□ -1.38
USP8-210ENST00000560379 ERO1BQ86YB8 467 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 FOXP4Q8IVH2 680 aaPredicted RBP6.44□□□□□ -1.38
USP8-210ENST00000560379 YAF2Q8IY57 180 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 DTX3Q8N9I9 347 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 REPS2Q8NFH8 660 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 OR52K2Q8NGK3 314 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 SCAMP5Q8TAC9 235 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 ST8SIA4Q92187 359 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 C16orf45Q96MC5 204 aaPredicted RBP6.44□□□□□ -1.38
USP8-210ENST00000560379 NEK1Q96PY6 1258 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 FNBP1Q96RU3 617 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 ACAT2Q9BWD1 397 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 PAIP1Q9H074 479 aaKnown RBP6.44□□□□□ -1.38
USP8-210ENST00000560379 PCDHAC1Q9H158 963 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 LIN28AQ9H9Z2 209 aaKnown RBP6.44□□□□□ -1.38
USP8-210ENST00000560379 HEYLQ9NQ87 328 aaPredicted RBP6.44□□□□□ -1.38
USP8-210ENST00000560379 DLL4Q9NR61 685 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 HPCAL4Q9UM19 191 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 PCDHGB4Q9UN71 923 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 RUVBL1Q9Y265 456 aaKnown RBP6.44□□□□□ -1.38
USP8-210ENST00000560379 SLC4A4Q9Y6R1 1079 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 CCDC171Q6TFL3 1326 aa6.44□□□□□ -1.38
USP8-210ENST00000560379 A0A0G2JMZ2 1700 aa6.43□□□□□ -1.38
USP8-210ENST00000560379 A0A0D9SFI3 127 aa6.43□□□□□ -1.38
USP8-210ENST00000560379 MANSC4A6NHS7 340 aaPredicted RBP6.43□□□□□ -1.38
USP8-210ENST00000560379 UBE2Q2LH0YL09 131 aa6.43□□□□□ -1.38
USP8-210ENST00000560379 DDX39AO00148 427 aaKnown RBP6.43□□□□□ -1.38
USP8-210ENST00000560379 TXNL1O43396 289 aa6.43□□□□□ -1.38
USP8-210ENST00000560379 FMO6PO60774 539 aa6.43□□□□□ -1.38
USP8-210ENST00000560379 E2F6O75461 281 aa6.43□□□□□ -1.38
USP8-210ENST00000560379 ERAL1O75616 437 aaKnown RBP6.43□□□□□ -1.38
USP8-210ENST00000560379 PALMO75781 387 aa6.43□□□□□ -1.38
USP8-210ENST00000560379 MLYCDO95822 493 aa6.43□□□□□ -1.38
USP8-210ENST00000560379 GAP43P17677 238 aa6.43□□□□□ -1.38
USP8-210ENST00000560379 EGR1P18146 543 aa6.43□□□□□ -1.38
USP8-210ENST00000560379 LAG3P18627 525 aa6.43□□□□□ -1.38
USP8-210ENST00000560379 RXRAP19793 462 aa6.43□□□□□ -1.38
USP8-210ENST00000560379 HLA-DPA1P20036 260 aa6.43□□□□□ -1.38
USP8-210ENST00000560379 FGFR4P22455 802 aa6.43□□□□□ -1.38
USP8-210ENST00000560379 MAPK3P27361 379 aaPredicted RBP6.43□□□□□ -1.38
USP8-210ENST00000560379 CRHR1P34998 444 aa6.43□□□□□ -1.38
USP8-210ENST00000560379 AARSP49588 968 aaKnown RBP eCLIP6.43□□□□□ -1.38
USP8-210ENST00000560379 TKTL1P51854 596 aa6.43□□□□□ -1.38
USP8-210ENST00000560379 ACTR2P61160 394 aa6.43□□□□□ -1.38
USP8-210ENST00000560379 AP2B1P63010 937 aa6.43□□□□□ -1.38
USP8-210ENST00000560379 GABPAQ06546 454 aa6.43□□□□□ -1.38
USP8-210ENST00000560379 CCDC15Q0P6D6 951 aa6.43□□□□□ -1.38
USP8-210ENST00000560379 RABEP1Q15276 862 aa6.43□□□□□ -1.38
USP8-210ENST00000560379 ZNF674Q2M3X9 581 aa6.43□□□□□ -1.38
USP8-210ENST00000560379 MCMDC2Q4G0Z9 681 aa6.43□□□□□ -1.38
USP8-210ENST00000560379 TMTC4Q5T4D3 741 aa6.43□□□□□ -1.38
USP8-210ENST00000560379 PHF19Q5T6S3 580 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms