RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 DPF3Q92784 378 aa11.52□□□□□ -0.56
CLPX-204ENST00000559152 ZNF669Q96BR6 464 aaPredicted RBP11.52□□□□□ -0.56
CLPX-204ENST00000559152 FCRL5Q96RD9 977 aa11.52□□□□□ -0.56
CLPX-204ENST00000559152 GORASP1Q9BQQ3 440 aa11.52□□□□□ -0.56
CLPX-204ENST00000559152 MLPHQ9BV36 600 aaPredicted RBP11.52□□□□□ -0.56
CLPX-204ENST00000559152 PIH1D1Q9NWS0 290 aaKnown RBP11.52□□□□□ -0.56
CLPX-204ENST00000559152 KCNK4Q9NYG8 393 aa11.52□□□□□ -0.56
CLPX-204ENST00000559152 DCTN4Q9UJW0 460 aa11.52□□□□□ -0.56
CLPX-204ENST00000559152 SNX10Q9Y5X0 201 aa11.52□□□□□ -0.56
CLPX-204ENST00000559152 THSD7BQ9C0I4 1608 aa11.52□□□□□ -0.57
CLPX-204ENST00000559152 DNAH12Q6ZR08 3092 aa11.52□□□□□ -0.57
CLPX-204ENST00000559152 WASH4PA8MWX3 477 aa11.52□□□□□ -0.57
CLPX-204ENST00000559152 KCNU1A8MYU2 1149 aa11.52□□□□□ -0.57
CLPX-204ENST00000559152 TPP1O14773 563 aa11.52□□□□□ -0.57
CLPX-204ENST00000559152 TIMM44O43615 452 aa11.52□□□□□ -0.57
CLPX-204ENST00000559152 ALDOAP04075 364 aaKnown RBP11.52□□□□□ -0.57
CLPX-204ENST00000559152 DLDP09622 509 aaKnown RBP11.52□□□□□ -0.57
CLPX-204ENST00000559152 TYK2P29597 1187 aa11.52□□□□□ -0.57
CLPX-204ENST00000559152 PSEN1P49768 467 aa11.52□□□□□ -0.57
CLPX-204ENST00000559152 TUBP50607 506 aa11.52□□□□□ -0.57
CLPX-204ENST00000559152 MNAT1P51948 309 aa11.52□□□□□ -0.57
CLPX-204ENST00000559152 CSE1LP55060 971 aaKnown RBP11.52□□□□□ -0.57
CLPX-204ENST00000559152 SMARCB1Q12824 385 aa11.52□□□□□ -0.57
CLPX-204ENST00000559152 OVGP1Q12889 678 aa11.52□□□□□ -0.57
CLPX-204ENST00000559152 ARHGEF6Q15052 776 aa11.52□□□□□ -0.57
CLPX-204ENST00000559152 CHI3L2Q15782 390 aa11.52□□□□□ -0.57
CLPX-204ENST00000559152 ANKLE1Q8NAG6 615 aa11.52□□□□□ -0.57
CLPX-204ENST00000559152 PPP1R14CQ8TAE6 165 aa11.52□□□□□ -0.57
CLPX-204ENST00000559152 CASP10Q92851 521 aa11.52□□□□□ -0.57
CLPX-204ENST00000559152 ISL2Q96A47 359 aa11.52□□□□□ -0.57
CLPX-204ENST00000559152 CELF6Q96J87 481 aaKnown RBP11.52□□□□□ -0.57
CLPX-204ENST00000559152 RBBP8Q99708 897 aa11.52□□□□□ -0.57
CLPX-204ENST00000559152 OXCT2Q9BYC2 517 aaPredicted RBP11.52□□□□□ -0.57
CLPX-204ENST00000559152 HMX1Q9NP08 348 aaPredicted RBP11.52□□□□□ -0.57
CLPX-204ENST00000559152 THAP1Q9NVV9 213 aa11.52□□□□□ -0.57
CLPX-204ENST00000559152 COMMD8Q9NX08 183 aa11.52□□□□□ -0.57
CLPX-204ENST00000559152 SFMBT1Q9UHJ3 866 aa11.52□□□□□ -0.57
CLPX-204ENST00000559152 SOX13Q9UN79 622 aa11.52□□□□□ -0.57
CLPX-204ENST00000559152 A0A1W2PQ45 241 aaPredicted RBP11.51□□□□□ -0.57
CLPX-204ENST00000559152 A0A1W2PQH9 124 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 A0A1W2PQY0 241 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 ARVCFO00192 962 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 HGSO14964 777 aaPredicted RBP11.51□□□□□ -0.57
CLPX-204ENST00000559152 MPOP05164 745 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 ERVK-10P10266 1014 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 SELPP16109 830 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 SERPINB8P50452 374 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 CDK7P50613 346 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 APLP1P51693 650 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 GEMP55040 296 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 MLLT6P55198 1093 aaPredicted RBP11.51□□□□□ -0.57
CLPX-204ENST00000559152 KCNJ2P63252 427 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 ZBTB16Q05516 673 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 BST1Q10588 318 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 STX3Q13277 289 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 BFSP2Q13515 415 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 MBTPS1Q14703 1052 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 CCDC153Q494R4 210 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 TAF1BQ53T94 588 aaPredicted RBP11.51□□□□□ -0.57
CLPX-204ENST00000559152 VARS2Q5ST30 1063 aaKnown RBP11.51□□□□□ -0.57
CLPX-204ENST00000559152 ZNF280DQ6N043 979 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 LRRC8DQ7L1W4 858 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 CLNKQ7Z7G1 428 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 MTDHQ86UE4 582 aaKnown RBP11.51□□□□□ -0.57
CLPX-204ENST00000559152 UNC5BQ8IZJ1 945 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 RTL3Q8N8U3 475 aaKnown RBP11.51□□□□□ -0.57
CLPX-204ENST00000559152 RFWD2Q8NHY2 731 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 ZSCAN18Q8TBC5 510 aaPredicted RBP11.51□□□□□ -0.57
CLPX-204ENST00000559152 PTCD2Q8WV60 388 aaKnown RBP11.51□□□□□ -0.57
CLPX-204ENST00000559152 IL12RB2Q99665 862 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 OLA1Q9NTK5 396 aaKnown RBP11.51□□□□□ -0.57
CLPX-204ENST00000559152 HEY2Q9UBP5 337 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 LNPEPQ9UIQ6 1025 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 NEU3Q9UQ49 428 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 PCDHB7Q9Y5E2 793 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 ZCWPW2A0A1B0GU75 182 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 E9PAM4 449 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 F8W810 466 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 TRAFD1O14545 582 aaPredicted RBP11.51□□□□□ -0.57
CLPX-204ENST00000559152 USP12O75317 370 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 NEBLO76041 1014 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 RTN3O95197 1032 aaPredicted RBP11.51□□□□□ -0.57
CLPX-204ENST00000559152 ATP6V1G2O95670 118 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 OR4Q2P0C623 313 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 GRK2P25098 689 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 LIMK2P53671 638 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 ELAVL2Q12926 359 aaKnown RBP11.51□□□□□ -0.57
CLPX-204ENST00000559152 PDE1CQ14123 709 aaPredicted RBP11.51□□□□□ -0.57
CLPX-204ENST00000559152 CTXN3Q4LDR2 81 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 PLEKHG4Q58EX7 1191 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 TEDDM1Q5T9Z0 273 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 PDPK2PQ6A1A2 396 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 STRA8Q7Z7C7 330 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 ARHGAP12Q8IWW6 846 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 SREK1Q8WXA9 508 aaKnown RBP11.51□□□□□ -0.57
CLPX-204ENST00000559152 LINC01599Q8WXQ3 324 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 FATE1Q969F0 183 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 CAPNS2Q96L46 248 aa11.51□□□□□ -0.57
CLPX-204ENST00000559152 FCRL3Q96P31 734 aaPredicted RBP11.51□□□□□ -0.57
CLPX-204ENST00000559152 KIFC1Q9BW19 673 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms