RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 TMIGD3P0DMS9 266 aaPredicted RBP4□□□□□ -1.77
TDP1-217ENST00000557782 LYL1P12980 280 aa4□□□□□ -1.77
TDP1-217ENST00000557782 SELLP14151 372 aa4□□□□□ -1.77
TDP1-217ENST00000557782 ARSAP15289 507 aa4□□□□□ -1.77
TDP1-217ENST00000557782 ZNF37AP17032 561 aaPredicted RBP4□□□□□ -1.77
TDP1-217ENST00000557782 ATF7P17544 494 aaPredicted RBP4□□□□□ -1.77
TDP1-217ENST00000557782 DESP17661 470 aa4□□□□□ -1.77
TDP1-217ENST00000557782 MATN1P21941 496 aa4□□□□□ -1.77
TDP1-217ENST00000557782 GLDCP23378 1020 aa4□□□□□ -1.77
TDP1-217ENST00000557782 ADRA1DP25100 572 aa4□□□□□ -1.77
TDP1-217ENST00000557782 PTAFRP25105 342 aa4□□□□□ -1.77
TDP1-217ENST00000557782 POU1F1P28069 291 aa4□□□□□ -1.77
TDP1-217ENST00000557782 FMO4P31512 558 aa4□□□□□ -1.77
TDP1-217ENST00000557782 CXCR5P32302 372 aa4□□□□□ -1.77
TDP1-217ENST00000557782 CIITAP33076 1130 aa4□□□□□ -1.77
TDP1-217ENST00000557782 MTNR1AP48039 350 aa4□□□□□ -1.77
TDP1-217ENST00000557782 EPHB3P54753 998 aa4□□□□□ -1.77
TDP1-217ENST00000557782 FOXL2P58012 376 aa4□□□□□ -1.77
TDP1-217ENST00000557782 RAC3P60763 192 aa4□□□□□ -1.77
TDP1-217ENST00000557782 RPS7P62081 194 aaKnown RBP4□□□□□ -1.77
TDP1-217ENST00000557782 FPGSQ05932 587 aa4□□□□□ -1.77
TDP1-217ENST00000557782 DYRK1AQ13627 763 aa4□□□□□ -1.77
TDP1-217ENST00000557782 BAATQ14032 418 aaPredicted RBP4□□□□□ -1.77
TDP1-217ENST00000557782 CSRP2Q16527 193 aa4□□□□□ -1.77
TDP1-217ENST00000557782 KCNMB1Q16558 191 aa4□□□□□ -1.77
TDP1-217ENST00000557782 LY6KQ17RY6 165 aa4□□□□□ -1.77
TDP1-217ENST00000557782 C2orf76Q3KRA6 126 aa4□□□□□ -1.77
TDP1-217ENST00000557782 CRY2Q49AN0 593 aa4□□□□□ -1.77
TDP1-217ENST00000557782 ZNF667Q5HYK9 610 aa4□□□□□ -1.77
TDP1-217ENST00000557782 SH2D4BQ5SQS7 431 aa4□□□□□ -1.77
TDP1-217ENST00000557782 CC2D1BQ5T0F9 858 aaKnown RBP4□□□□□ -1.77
TDP1-217ENST00000557782 ATG9BQ674R7 924 aa4□□□□□ -1.77
TDP1-217ENST00000557782 GRHL2Q6ISB3 625 aa4□□□□□ -1.77
TDP1-217ENST00000557782 TADA2BQ86TJ2 420 aa4□□□□□ -1.77
TDP1-217ENST00000557782 ADGRG5Q8IZF4 528 aa4□□□□□ -1.77
TDP1-217ENST00000557782 FAM109AQ8N4B1 249 aa4□□□□□ -1.77
TDP1-217ENST00000557782 IL17RCQ8NAC3 791 aa4□□□□□ -1.77
TDP1-217ENST00000557782 FBXO15Q8NCQ5 510 aaPredicted RBP4□□□□□ -1.77
TDP1-217ENST00000557782 OR52L2PQ8NGH6 319 aa4□□□□□ -1.77
TDP1-217ENST00000557782 DUSP19Q8WTR2 217 aa4□□□□□ -1.77
TDP1-217ENST00000557782 EXOC4Q96A65 974 aa4□□□□□ -1.77
TDP1-217ENST00000557782 RSPRY1Q96DX4 576 aa4□□□□□ -1.77
TDP1-217ENST00000557782 CLSTN3Q9BQT9 956 aa4□□□□□ -1.77
TDP1-217ENST00000557782 PI4K2AQ9BTU6 479 aa4□□□□□ -1.77
TDP1-217ENST00000557782 TUBB6Q9BUF5 446 aa4□□□□□ -1.77
TDP1-217ENST00000557782 ACAT2Q9BWD1 397 aa4□□□□□ -1.77
TDP1-217ENST00000557782 TRIM31Q9BZY9 425 aa4□□□□□ -1.77
TDP1-217ENST00000557782 DEF6Q9H4E7 631 aa4□□□□□ -1.77
TDP1-217ENST00000557782 POLR1BQ9H9Y6 1135 aa4□□□□□ -1.77
TDP1-217ENST00000557782 SCPEP1Q9HB40 452 aa4□□□□□ -1.77
TDP1-217ENST00000557782 GLOD4Q9HC38 313 aa4□□□□□ -1.77
TDP1-217ENST00000557782 NCKIPSDQ9NZQ3 722 aa4□□□□□ -1.77
TDP1-217ENST00000557782 VSX1Q9NZR4 365 aaPredicted RBP4□□□□□ -1.77
TDP1-217ENST00000557782 MKLN1Q9UL63 735 aa4□□□□□ -1.77
TDP1-217ENST00000557782 POMT1Q9Y6A1 747 aa4□□□□□ -1.77
TDP1-217ENST00000557782 CAPN7Q9Y6W3 813 aa4□□□□□ -1.77
TDP1-217ENST00000557782 AATKQ6ZMQ8 1374 aa4□□□□□ -1.77
TDP1-217ENST00000557782 ABCC9O60706 1549 aa4□□□□□ -1.77
TDP1-217ENST00000557782 TRAV34A0A0B4J273 112 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 A0A1B0GTW7 788 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 A0A1W2PRG0 241 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 ARHGEF37A1IGU5 675 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 OR2A25A4D2G3 310 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 CCDC151A5D8V7 595 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 MYADML2A6NDP7 307 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 URADA6NGE7 173 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 KIAA1324LA8MWY0 1029 aaPredicted RBP3.99□□□□□ -1.77
TDP1-217ENST00000557782 SCAMP1O15126 338 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 TRIM24O15164 1050 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 LIASO43766 372 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 EXOC3O60645 756 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 SEMA7AO75326 666 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 TACC1O75410 805 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 RECQL4O94761 1208 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 WNT11O96014 354 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 IRF1P10914 325 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 C6P13671 934 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 P4HA1P13674 534 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 GABRB1P18505 474 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 FGFR4P22455 802 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 AVPR2P30518 371 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 IRAK1P51617 712 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 HSD11B2P80365 405 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 TXNL4AP83876 142 aaKnown RBP3.99□□□□□ -1.77
TDP1-217ENST00000557782 CEBPZQ03701 1054 aaKnown RBP3.99□□□□□ -1.77
TDP1-217ENST00000557782 YWHAHQ04917 246 aaPredicted RBP3.99□□□□□ -1.77
TDP1-217ENST00000557782 SCN1BQ07699 218 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 DDR1Q08345 913 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 COASYQ13057 564 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 SNTB1Q13884 538 aaKnown RBP3.99□□□□□ -1.77
TDP1-217ENST00000557782 MORF4L2Q15014 288 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 SLC18A3Q16572 532 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 AP5B1Q2VPB7 878 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 ZSCAN23Q3MJ62 389 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 CD300EQ496F6 205 aaPredicted RBP3.99□□□□□ -1.77
TDP1-217ENST00000557782 PARP10Q53GL7 1025 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 DCAF17Q5H9S7 520 aaPredicted RBP3.99□□□□□ -1.77
TDP1-217ENST00000557782 COLEC12Q5KU26 742 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 CST9LP1Q5W188 147 aa3.99□□□□□ -1.77
TDP1-217ENST00000557782 CAVIN1Q6NZI2 390 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms