RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 CREB3L4Q8TEY5 395 aa6.18□□□□□ -1.42
HCFC2-204ENST00000550335 KLHL29Q96CT2 875 aa6.18□□□□□ -1.42
HCFC2-204ENST00000550335 CCDC17Q96LX7 622 aa6.18□□□□□ -1.42
HCFC2-204ENST00000550335 SERINC2Q96SA4 455 aa6.18□□□□□ -1.42
HCFC2-204ENST00000550335 CLSTN3Q9BQT9 956 aa6.18□□□□□ -1.42
HCFC2-204ENST00000550335 MXD3Q9BW11 206 aa6.18□□□□□ -1.42
HCFC2-204ENST00000550335 ZNF703Q9H7S9 590 aaPredicted RBP6.18□□□□□ -1.42
HCFC2-204ENST00000550335 SMPD4Q9NXE4 827 aa6.18□□□□□ -1.42
HCFC2-204ENST00000550335 LIMA1Q9UHB6 759 aaKnown RBP6.18□□□□□ -1.42
HCFC2-204ENST00000550335 FBXO4Q9UKT5 387 aa6.18□□□□□ -1.42
HCFC2-204ENST00000550335 KCNE2Q9Y6J6 123 aa6.18□□□□□ -1.42
HCFC2-204ENST00000550335 VILLO15195 856 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 P4HA2O15460 535 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 TGFB1I1O43294 461 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 GJB3O75712 270 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 CNTN5O94779 1100 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 MLYCDO95822 493 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 LAMP2P13473 410 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 HOXB9P17482 250 aaPredicted RBP6.17□□□□□ -1.42
HCFC2-204ENST00000550335 PSMA4P25789 261 aaKnown RBP6.17□□□□□ -1.42
HCFC2-204ENST00000550335 PCSK6P29122 969 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 ICAM3P32942 547 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 GRIA3P42263 894 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 PTPN9P43378 593 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 OAZ1P54368 228 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 TMEM115Q12893 351 aaPredicted RBP6.17□□□□□ -1.42
HCFC2-204ENST00000550335 KCNB1Q14721 858 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 ZNF667Q5HYK9 610 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 ARMC3Q5W041 872 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 GALNT7Q86SF2 657 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 RASAL3Q86YV0 1011 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 SRBD1Q8N5C6 995 aaKnown RBP6.17□□□□□ -1.42
HCFC2-204ENST00000550335 TERB1Q8NA31 727 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 ACTRT2Q8TDY3 377 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 RAB40AQ8WXH6 277 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 HSPH1Q92598 858 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 SMARCE1Q969G3 411 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 NR1H4Q96RI1 486 aaPredicted RBP6.17□□□□□ -1.42
HCFC2-204ENST00000550335 CDK5RAP1Q96SZ6 601 aaKnown RBP6.17□□□□□ -1.42
HCFC2-204ENST00000550335 YME1L1Q96TA2 773 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 SMARCAD1Q9H4L7 1026 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 CYP4F11Q9HBI6 524 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 ARL8BQ9NVJ2 186 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 BABAM1Q9NWV8 329 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 ZNF70Q9UC06 446 aaPredicted RBP6.17□□□□□ -1.42
HCFC2-204ENST00000550335 DHDHQ9UQ10 334 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 LYVE1Q9Y5Y7 322 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 KDM3AQ9Y4C1 1321 aa6.17□□□□□ -1.42
HCFC2-204ENST00000550335 FAM237BA0A1B0GVD1 139 aa6.16□□□□□ -1.42
HCFC2-204ENST00000550335 TCRBV7S3A2A0A539 114 aa6.16□□□□□ -1.42
HCFC2-204ENST00000550335 TSPAN9O75954 239 aa6.16□□□□□ -1.42
HCFC2-204ENST00000550335 TJP3O95049 919 aa6.16□□□□□ -1.42
HCFC2-204ENST00000550335 MT-CO3P00414 261 aa6.16□□□□□ -1.42
HCFC2-204ENST00000550335 CHRM4P08173 479 aa6.16□□□□□ -1.42
HCFC2-204ENST00000550335 IGFBP2P18065 325 aa6.16□□□□□ -1.42
HCFC2-204ENST00000550335 HOXA5P20719 270 aa6.16□□□□□ -1.42
HCFC2-204ENST00000550335 EIF3BP55884 814 aaKnown RBP6.16□□□□□ -1.42
HCFC2-204ENST00000550335 CYP4F2P78329 520 aa6.16□□□□□ -1.42
HCFC2-204ENST00000550335 KPNB1Q14974 876 aaKnown RBP6.16□□□□□ -1.42
HCFC2-204ENST00000550335 R3HDM1Q15032 1099 aaKnown RBP6.16□□□□□ -1.42
HCFC2-204ENST00000550335 CCDC96Q2M329 555 aa6.16□□□□□ -1.42
HCFC2-204ENST00000550335 ANXA2RQ3ZCQ2 193 aa6.16□□□□□ -1.42
HCFC2-204ENST00000550335 AWAT1Q58HT5 328 aa6.16□□□□□ -1.42
HCFC2-204ENST00000550335 TMEM81Q6P7N7 255 aa6.16□□□□□ -1.42
HCFC2-204ENST00000550335 SLC29A4Q7RTT9 530 aa6.16□□□□□ -1.42
HCFC2-204ENST00000550335 BCDIN3DQ7Z5W3 292 aaKnown RBP6.16□□□□□ -1.42
HCFC2-204ENST00000550335 FAM110DQ8TAY7 271 aaPredicted RBP6.16□□□□□ -1.42
HCFC2-204ENST00000550335 UBE2Q2Q8WVN8 375 aa6.16□□□□□ -1.42
HCFC2-204ENST00000550335 CELF1Q92879 486 aaKnown RBP6.16□□□□□ -1.42
HCFC2-204ENST00000550335 PERPQ96FX8 193 aa6.16□□□□□ -1.42
HCFC2-204ENST00000550335 CADM1Q9BY67 442 aaKnown RBP6.16□□□□□ -1.42
HCFC2-204ENST00000550335 HCFC1R1Q9NWW0 138 aa6.16□□□□□ -1.42
HCFC2-204ENST00000550335 MPP6Q9NZW5 540 aa6.16□□□□□ -1.42
HCFC2-204ENST00000550335 TESMINQ9Y4I5 508 aa6.16□□□□□ -1.42
HCFC2-204ENST00000550335 CC2D2AQ9P2K1 1620 aa6.15□□□□□ -1.42
HCFC2-204ENST00000550335 A0A0G2JLL6 359 aaPredicted RBP6.15□□□□□ -1.42
HCFC2-204ENST00000550335 CCER2I3L3R5 266 aa6.15□□□□□ -1.42
HCFC2-204ENST00000550335 PLOD3O60568 738 aa6.15□□□□□ -1.42
HCFC2-204ENST00000550335 TACC1O75410 805 aa6.15□□□□□ -1.42
HCFC2-204ENST00000550335 TUBB4AP04350 444 aa6.15□□□□□ -1.42
HCFC2-204ENST00000550335 ENO1P06733 434 aaKnown RBP6.15□□□□□ -1.42
HCFC2-204ENST00000550335 GALTP07902 379 aa6.15□□□□□ -1.42
HCFC2-204ENST00000550335 ELFN1P0C7U0 828 aa6.15□□□□□ -1.42
HCFC2-204ENST00000550335 HKR1P10072 659 aa6.15□□□□□ -1.42
HCFC2-204ENST00000550335 SFPQP23246 707 aaKnown RBP eCLIP6.15□□□□□ -1.42
HCFC2-204ENST00000550335 PBX3P40426 434 aa6.15□□□□□ -1.42
HCFC2-204ENST00000550335 MTNR1AP48039 350 aa6.15□□□□□ -1.42
HCFC2-204ENST00000550335 NLRP5P59047 1200 aa6.15□□□□□ -1.42
HCFC2-204ENST00000550335 RPL7AP62424 266 aaKnown RBP6.15□□□□□ -1.42
HCFC2-204ENST00000550335 GOLGA8DPQ0D2H9 430 aa6.15□□□□□ -1.42
HCFC2-204ENST00000550335 LRMPQ12912 555 aa6.15□□□□□ -1.42
HCFC2-204ENST00000550335 SLC14A1Q13336 389 aa6.15□□□□□ -1.42
HCFC2-204ENST00000550335 TUBA3CQ13748 450 aa6.15□□□□□ -1.42
HCFC2-204ENST00000550335 PFKFB3Q16875 520 aaPredicted RBP6.15□□□□□ -1.42
HCFC2-204ENST00000550335 EDRF1Q3B7T1 1238 aa6.15□□□□□ -1.42
HCFC2-204ENST00000550335 GLE1Q53GS7 698 aaKnown RBP6.15□□□□□ -1.42
HCFC2-204ENST00000550335 AARS2Q5JTZ9 985 aaKnown RBP6.15□□□□□ -1.42
HCFC2-204ENST00000550335 KIAA0895LQ68EN5 471 aa6.15□□□□□ -1.42
HCFC2-204ENST00000550335 TTI2Q6NXR4 508 aa6.15□□□□□ -1.42
HCFC2-204ENST00000550335 TUBA3EQ6PEY2 450 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms