RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 SKA1Q96BD8 255 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 RRP36Q96EU6 259 aaKnown RBP4.51□□□□□ -1.69
PTCH1-216ENST00000548379 AGAP2Q99490 1192 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 SLC26A6Q9BXS9 759 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 HDHD5Q9BXW7 423 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 ERVK-5Q9HDB9 667 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 MLXIPLQ9NP71 852 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 KLQ9UEF7 1012 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 HEMK1Q9Y5R4 338 aaPredicted RBP4.51□□□□□ -1.69
PTCH1-216ENST00000548379 TROQ12816 1431 aaPredicted RBP4.51□□□□□ -1.69
PTCH1-216ENST00000548379 TTC37Q6PGP7 1564 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 COL11A2P13942 1736 aaPredicted RBP4.51□□□□□ -1.69
PTCH1-216ENST00000548379 MLH3Q9UHC1 1453 aa4.5□□□□□ -1.69
PTCH1-216ENST00000548379 ZNF335Q9H4Z2 1342 aaPredicted RBP4.5□□□□□ -1.69
PTCH1-216ENST00000548379 SPATA31D1Q6ZQQ2 1576 aa4.5□□□□□ -1.69
PTCH1-216ENST00000548379 NPATQ14207 1427 aa4.5□□□□□ -1.69
PTCH1-216ENST00000548379 NCOA1Q15788 1441 aa4.5□□□□□ -1.69
PTCH1-216ENST00000548379 MCIDASD6RGH6 385 aa4.5□□□□□ -1.69
PTCH1-216ENST00000548379 UBE2Q2LH0YL09 131 aa4.5□□□□□ -1.69
PTCH1-216ENST00000548379 DSCR3O14972 297 aa4.5□□□□□ -1.69
PTCH1-216ENST00000548379 EIF5BO60841 1220 aaKnown RBP4.5□□□□□ -1.69
PTCH1-216ENST00000548379 ATP1A3P13637 1013 aa4.5□□□□□ -1.69
PTCH1-216ENST00000548379 HOXB9P17482 250 aaPredicted RBP4.5□□□□□ -1.69
PTCH1-216ENST00000548379 CCT4P50991 539 aaKnown RBP4.5□□□□□ -1.69
PTCH1-216ENST00000548379 RPS6KA3P51812 740 aa4.5□□□□□ -1.69
PTCH1-216ENST00000548379 ALKBH1Q13686 389 aaKnown RBP4.5□□□□□ -1.69
PTCH1-216ENST00000548379 KPNB1Q14974 876 aaKnown RBP4.5□□□□□ -1.69
PTCH1-216ENST00000548379 MTFR2Q6P444 385 aa4.5□□□□□ -1.69
PTCH1-216ENST00000548379 SERPINA13PQ6UXR4 307 aa4.5□□□□□ -1.69
PTCH1-216ENST00000548379 C1orf122Q6ZSJ8 110 aa4.5□□□□□ -1.69
PTCH1-216ENST00000548379 GALNT7Q86SF2 657 aa4.5□□□□□ -1.69
PTCH1-216ENST00000548379 PAQR4Q8N4S7 273 aaPredicted RBP4.5□□□□□ -1.69
PTCH1-216ENST00000548379 TBC1D22AQ8WUA7 517 aa4.5□□□□□ -1.69
PTCH1-216ENST00000548379 ZFPM2Q8WW38 1151 aa4.5□□□□□ -1.69
PTCH1-216ENST00000548379 ZBTB10Q96DT7 871 aa4.5□□□□□ -1.69
PTCH1-216ENST00000548379 RNFT2Q96EX2 444 aa4.5□□□□□ -1.69
PTCH1-216ENST00000548379 ZNF347Q96SE7 839 aa4.5□□□□□ -1.69
PTCH1-216ENST00000548379 CLSTN3Q9BQT9 956 aa4.5□□□□□ -1.69
PTCH1-216ENST00000548379 SCAND2PQ9GZW5 306 aaPredicted RBP4.5□□□□□ -1.69
PTCH1-216ENST00000548379 PAIP1Q9H074 479 aaKnown RBP4.5□□□□□ -1.69
PTCH1-216ENST00000548379 OSBPL5Q9H0X9 879 aaPredicted RBP4.5□□□□□ -1.69
PTCH1-216ENST00000548379 PREBQ9HCU5 417 aa4.5□□□□□ -1.69
PTCH1-216ENST00000548379 CFDP1Q9UEE9 299 aaPredicted RBP4.5□□□□□ -1.69
PTCH1-216ENST00000548379 DTX4Q9Y2E6 619 aa4.5□□□□□ -1.69
PTCH1-216ENST00000548379 INSL6Q9Y581 213 aa4.5□□□□□ -1.69
PTCH1-216ENST00000548379 CYP46A1Q9Y6A2 500 aa4.5□□□□□ -1.69
PTCH1-216ENST00000548379 CDK13Q14004 1512 aaKnown RBP4.5□□□□□ -1.69
PTCH1-216ENST00000548379 EMSYQ7Z589 1322 aa4.49□□□□□ -1.69
PTCH1-216ENST00000548379 SH2D7A6NKC9 451 aaPredicted RBP4.49□□□□□ -1.69
PTCH1-216ENST00000548379 KCNJ18B7U540 433 aa4.49□□□□□ -1.69
PTCH1-216ENST00000548379 TMEM232C9JQI7 657 aa4.49□□□□□ -1.69
PTCH1-216ENST00000548379 PEX12O00623 359 aa4.49□□□□□ -1.69
PTCH1-216ENST00000548379 TULP3O75386 442 aa4.49□□□□□ -1.69
PTCH1-216ENST00000548379 MBD4O95243 580 aa4.49□□□□□ -1.69
PTCH1-216ENST00000548379 IFIT1P09914 478 aaKnown RBP4.49□□□□□ -1.69
PTCH1-216ENST00000548379 CYP2A6P11509 494 aaPredicted RBP4.49□□□□□ -1.69
PTCH1-216ENST00000548379 PKMP14618 531 aaKnown RBP4.49□□□□□ -1.69
PTCH1-216ENST00000548379 GDF5P43026 501 aa4.49□□□□□ -1.69
PTCH1-216ENST00000548379 PFKFB3Q16875 520 aaPredicted RBP4.49□□□□□ -1.69
PTCH1-216ENST00000548379 VWA5B1Q5TIE3 1220 aa4.49□□□□□ -1.69
PTCH1-216ENST00000548379 FCRLBQ6BAA4 426 aa4.49□□□□□ -1.69
PTCH1-216ENST00000548379 SUMO4Q6EEV6 95 aa4.49□□□□□ -1.69
PTCH1-216ENST00000548379 ACAD10Q6JQN1 1059 aa4.49□□□□□ -1.69
PTCH1-216ENST00000548379 TMEM200AQ86VY9 491 aa4.49□□□□□ -1.69
PTCH1-216ENST00000548379 RHPN2Q8IUC4 686 aa4.49□□□□□ -1.69
PTCH1-216ENST00000548379 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.49□□□□□ -1.69
PTCH1-216ENST00000548379 FAM110DQ8TAY7 271 aaPredicted RBP4.49□□□□□ -1.69
PTCH1-216ENST00000548379 C2CD4CQ8TF44 421 aa4.49□□□□□ -1.69
PTCH1-216ENST00000548379 STAMQ92783 540 aa4.49□□□□□ -1.69
PTCH1-216ENST00000548379 SH3KBP1Q96B97 665 aa4.49□□□□□ -1.69
PTCH1-216ENST00000548379 ASB2Q96Q27 587 aa4.49□□□□□ -1.69
PTCH1-216ENST00000548379 FCRL5Q96RD9 977 aa4.49□□□□□ -1.69
PTCH1-216ENST00000548379 ABHD14AQ9BUJ0 271 aa4.49□□□□□ -1.69
PTCH1-216ENST00000548379 TM2D2Q9BX73 214 aa4.49□□□□□ -1.69
PTCH1-216ENST00000548379 TRIM2Q9C040 744 aa4.49□□□□□ -1.69
PTCH1-216ENST00000548379 IKZF4Q9H2S9 585 aa4.49□□□□□ -1.69
PTCH1-216ENST00000548379 TMEM248Q9NWD8 314 aa4.49□□□□□ -1.69
PTCH1-216ENST00000548379 HDAC6Q9UBN7 1215 aa4.49□□□□□ -1.69
PTCH1-216ENST00000548379 SLC25A10Q9UBX3 287 aaPredicted RBP4.49□□□□□ -1.69
PTCH1-216ENST00000548379 MAFFQ9ULX9 164 aa4.49□□□□□ -1.69
PTCH1-216ENST00000548379 AGLP35573 1532 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 GOLGA6L10A0A0M3HER8 536 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 LRRC3CA6NJW4 275 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 ANP32CO43423 234 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 LATS1O95835 1130 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 IGLV2-14P01704 120 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 CYP4B1P13584 511 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 AKR1A1P14550 325 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 HOXA7P31268 230 aaPredicted RBP4.48□□□□□ -1.69
PTCH1-216ENST00000548379 HSPA1LP34931 641 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 HNF1BP35680 557 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 GJC1P36383 396 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 PGM1P36871 562 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 GPD2P43304 727 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 MTNR1AP48039 350 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 PTH2RP49190 550 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 GEMIN4P57678 1058 aaKnown RBP4.48□□□□□ -1.69
PTCH1-216ENST00000548379 PROK1P58294 105 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 TUBA4AP68366 448 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 ARHGAP8P85298 464 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms