RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 PRDX6P30041 224 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 CD68P34810 354 aaPredicted RBP16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 LHX1P48742 406 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 CSE1LP55060 971 aaKnown RBP16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 SMAD1Q15797 465 aaKnown RBP16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 RAB41Q5JT25 222 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 POU5F2Q8N7G0 328 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 GSTCDQ8NEC7 633 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 NPLOC4Q8TAT6 608 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 ADAM32Q8TC27 787 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 UCMAQ8WVF2 138 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 MFSD3Q96ES6 412 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 NR1H4Q96RI1 486 aaPredicted RBP16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 TTC1Q99614 292 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 COLEC11Q9BWP8 271 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 TSPYL2Q9H2G4 693 aaPredicted RBP16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 COG4Q9H9E3 785 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 NMRAL1Q9HBL8 299 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 CRTAC1Q9NQ79 661 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 DLGAP2Q9P1A6 1054 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 MAGEA13PA6NCF6 341 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 C2P06681 752 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 NCF2P19878 526 aaPredicted RBP16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 DNAJB2P25686 324 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 CRABP2P29373 138 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 SERPINB6P35237 376 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 BTKQ06187 659 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 GALNT2Q10471 571 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 IRF5Q13568 498 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 VWA5B1Q5TIE3 1220 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 RSPH3Q86UC2 560 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 KBTBD2Q8IY47 623 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 TMEM86AQ8N2M4 240 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 MCMBPQ9BTE3 642 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 CDH19Q9H159 772 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 S100A14Q9HCY8 104 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 DDIT4Q9NX09 232 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 NUP205Q92621 2012 aa16.36■□□□□ 0.21
CHMP1A-202ENST00000535997 MEI4A8MW99 385 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 HAS3O00219 553 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 AP1G2O75843 785 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 HSPA4LO95757 839 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 BAG2O95816 211 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 PSEN1P49768 467 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 DSG1Q02413 1049 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 MPP3Q13368 585 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 RALGPS1Q5JS13 557 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 CFAP157Q5JU67 520 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 CERCAMQ5T4B2 595 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 TWF2Q6IBS0 349 aaKnown RBP16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 KCNMB4Q86W47 210 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 NPWQ8N729 165 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 BRI3BPQ8WY22 251 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 ATXN7L3BQ96GX2 97 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 SENP8Q96LD8 212 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 TEKT5Q96M29 485 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 KCNK16Q96T55 309 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 SMOQ99835 787 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 MLPHQ9BV36 600 aaPredicted RBP16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 WDCPQ9H6R7 721 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 CHRAC1Q9NRG0 131 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 OR12D3Q9UGF7 316 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 MID2Q9UJV3 735 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 ATP9BO43861 1147 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 LTFP02788 710 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 APOA4P06727 396 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 SP100P23497 879 aaPredicted RBP16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 GMPRP36959 345 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 PSEN2P49810 448 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 NAPRTQ6XQN6 538 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 AZIN2Q96A70 460 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 PGLYRP2Q96PD5 576 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 EPAS1Q99814 870 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 C20orf96Q9NUD7 363 aaPredicted RBP16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 SLC38A7Q9NVC3 462 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 OXSMQ9NWU1 459 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 NSMCE4AQ9NXX6 385 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 PPM1HQ9ULR3 514 aa16.35■□□□□ 0.21
CHMP1A-202ENST00000535997 TRIP12Q14669 1992 aaPredicted RBP16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 E2F8A0AVK6 867 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 USP17L7P0C7H9 530 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 CXCR3P49682 368 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 ZNF33AQ06730 810 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 GRIK3Q13003 919 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 USP4Q13107 963 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 FAM110CQ1W6H9 321 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 PRAMEF19Q5SWL8 479 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 ZNF781Q8N8C0 355 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 JADE3Q92613 823 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 PCED1BQ96HM7 432 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 ZFP42Q96MM3 310 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 ECSITQ9BQ95 431 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 ILKAPQ9H0C8 392 aaPredicted RBP16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 CDH22Q9UJ99 828 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 LOC100653049A0A140TA62 436 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 MYBPHLA2RUH7 354 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 PSMD3O43242 534 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 DCXO43602 365 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 KRT34O76011 436 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms