RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	MARCH6	O60337	910 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	CDC45	O75419	566 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	BAG4	O95429	457 aa	Known RBP	6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	VNN2	O95498	520 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	MYL4	P12829	197 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	CEACAM1	P13688	526 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	CSRP1	P21291	193 aa	Known RBP	6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	PSMA5	P28066	241 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	RPL9	P32969	192 aa	Known RBP	6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	EFNA5	P52803	228 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	HMGA2	P52926	109 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	ARPP19	P56211	112 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	HHEX	Q03014	270 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	PLD1	Q13393	1074 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	PON2	Q15165	354 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	TBR1	Q16650	682 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	PLK5	Q496M5	336 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	CTXN3	Q4LDR2	81 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	TMEM196	Q5HYL7	178 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	STXBP5	Q5T5C0	1151 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	ATF7IP2	Q5U623	682 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	FGD2	Q7Z6J4	655 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	ARID3B	Q8IVW6	561 aa	Predicted RBP	6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	CAMKK1	Q8N5S9	505 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	CHFR	Q96EP1	664 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	ZMAT2	Q96NC0	199 aa	Known RBP	6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	MTMR9	Q96QG7	549 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	SCAND2P	Q9GZW5	306 aa	Predicted RBP	6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	OSBPL2	Q9H1P3	480 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	NELFA	Q9H3P2	528 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	SLITRK6	Q9H5Y7	841 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	TTC12	Q9H892	705 aa	Predicted RBP	6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	PTPRH	Q9HD43	1115 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	TNFSF13B	Q9Y275	285 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	ASH1L	Q9NR48	2969 aa	Known RBP	6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	BCLAF3	A2AJT9	711 aa	Known RBP	6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	PLD2	O14939	933 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	ATG13	O75143	517 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	OAZ2	O95190	189 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	PRAMEF12	O95522	483 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	CCDC192	P0DO97	292 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	CYP11B2	P19099	503 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	PXN	P49023	591 aa	Predicted RBP	6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	AARS	P49588	968 aa	Known RBP eCLIP	6.55	□□□□□ -1.36	7e-7	■■□□□ 12.9
PICALM-223	ENST00000534412	KARS	Q15046	597 aa	Known RBP	6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	PPP2R5A	Q15172	486 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	CALCRL	Q16602	461 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	ITPRIPL2	Q3MIP1	535 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	USP39	Q53GS9	565 aa	Known RBP	6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	TM4SF20	Q53R12	229 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	DAB2IP	Q5VWQ8	1189 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	CC2D1A	Q6P1N0	951 aa	Predicted RBP	6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	CPLX2	Q6PUV4	134 aa	Known RBP	6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	GAREM2	Q75VX8	874 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	RUFY3	Q7L099	469 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	MAEA	Q7L5Y9	396 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	HAUS6	Q7Z4H7	955 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	CATSPER3	Q86XQ3	398 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412		Q8N1X5	172 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	APPL2	Q8NEU8	664 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	OR14K1	Q8NGZ2	314 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	DEPTOR	Q8TB45	409 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	PSMG2	Q969U7	264 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	ZFYVE19	Q96K21	471 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	KIFC3	Q9BVG8	833 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	CCDC94	Q9BW85	323 aa	Predicted RBP	6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	SCNM1	Q9BWG6	230 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	CDT1	Q9H211	546 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	TUFT1	Q9NNX1	390 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	GJB4	Q9NTQ9	266 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	HSFX1	Q9UBD0	423 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	TPCN1	Q9ULQ1	816 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	HS3ST3A1	Q9Y663	406 aa		6.55	□□□□□ -1.36
PICALM-223	ENST00000534412	PHLPP2	Q6ZVD8	1323 aa		6.54	□□□□□ -1.36
PICALM-223	ENST00000534412		A0A087WWV3	80 aa		6.54	□□□□□ -1.36
PICALM-223	ENST00000534412	C4orf47	A7E2U8	309 aa		6.54	□□□□□ -1.36
PICALM-223	ENST00000534412		M0QZQ0	153 aa		6.54	□□□□□ -1.36
PICALM-223	ENST00000534412	TAF4	O00268	1085 aa		6.54	□□□□□ -1.36
PICALM-223	ENST00000534412	MATN2	O00339	956 aa		6.54	□□□□□ -1.36
PICALM-223	ENST00000534412	CDX4	O14627	284 aa	Predicted RBP	6.54	□□□□□ -1.36
PICALM-223	ENST00000534412	TRDMT1	O14717	391 aa	Known RBP	6.54	□□□□□ -1.36
PICALM-223	ENST00000534412	NEMF	O60524	1076 aa		6.54	□□□□□ -1.36
PICALM-223	ENST00000534412	MED24	O75448	989 aa		6.54	□□□□□ -1.36
PICALM-223	ENST00000534412	CDKL5	O76039	1030 aa		6.54	□□□□□ -1.36
PICALM-223	ENST00000534412	FGF19	O95750	216 aa		6.54	□□□□□ -1.36
PICALM-223	ENST00000534412	CAVIN2	O95810	425 aa		6.54	□□□□□ -1.36
PICALM-223	ENST00000534412	TOP3B	O95985	862 aa	Known RBP	6.54	□□□□□ -1.36
PICALM-223	ENST00000534412	XBP1	P17861	261 aa		6.54	□□□□□ -1.36
PICALM-223	ENST00000534412	PROZ	P22891	400 aa		6.54	□□□□□ -1.36
PICALM-223	ENST00000534412	ACVRL1	P37023	503 aa		6.54	□□□□□ -1.36
PICALM-223	ENST00000534412	MCM2	P49736	904 aa		6.54	□□□□□ -1.36
PICALM-223	ENST00000534412	YWHAH	Q04917	246 aa	Predicted RBP	6.54	□□□□□ -1.36
PICALM-223	ENST00000534412	GRSF1	Q12849	480 aa	Known RBP eCLIP	6.54	□□□□□ -1.36	2e-8	■■□□□ 14.2
PICALM-223	ENST00000534412	GPR17	Q13304	367 aa		6.54	□□□□□ -1.36
PICALM-223	ENST00000534412	FOXE3	Q13461	319 aa		6.54	□□□□□ -1.36
PICALM-223	ENST00000534412	PTPA	Q15257	358 aa		6.54	□□□□□ -1.36
PICALM-223	ENST00000534412	ELF2	Q15723	593 aa		6.54	□□□□□ -1.36
PICALM-223	ENST00000534412	CATSPERE	Q5SY80	951 aa		6.54	□□□□□ -1.36
PICALM-223	ENST00000534412	FSTL4	Q6MZW2	842 aa		6.54	□□□□□ -1.36

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