RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 SLC25A52Q3SY17 297 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 C5orf22Q49AR2 442 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 CT47A1Q5JQC4 288 aaPredicted RBP9.91□□□□□ -0.82
SSBP3-215ENST00000533946 WDR59Q6PJI9 974 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 SLC36A4Q6YBV0 504 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 Q6ZVU0 165 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 PIP4P1Q86T03 277 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 ARFGAP1Q8N6T3 406 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 SNX19Q92543 992 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 FAM81BQ96LP2 452 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 PCMTD1Q96MG8 357 aaPredicted RBP9.91□□□□□ -0.82
SSBP3-215ENST00000533946 ERGIC2Q96RQ1 377 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 TNKS2Q9H2K2 1166 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 PABPC3Q9H361 631 aaKnown RBP9.91□□□□□ -0.82
SSBP3-215ENST00000533946 WDCPQ9H6R7 721 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 RTN4Q9NQC3 1192 aaKnown RBP9.91□□□□□ -0.82
SSBP3-215ENST00000533946 GPATCH2LQ9NWQ4 482 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 FBXL12Q9NXK8 326 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 KIAA1522Q9P206 1035 aaPredicted RBP9.91□□□□□ -0.82
SSBP3-215ENST00000533946 SLC6A14Q9UN76 642 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 BTBD3Q9Y2F9 522 aa9.91□□□□□ -0.82
SSBP3-215ENST00000533946 FNDC3AQ9Y2H6 1198 aaKnown RBP9.91□□□□□ -0.82
SSBP3-215ENST00000533946 CHD5Q8TDI0 1954 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 BPTFQ12830 3046 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 A0A1B0GVM2 712 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 SYCE3A1L190 88 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 TCAF2A6NFQ2 919 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 MEI4A8MW99 385 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 E9PAM4 449 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 ARHGAP33O14559 1287 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 SH3BP5O60239 455 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 SEMA4FO95754 770 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 ATP5BP06576 529 aaKnown RBP9.9□□□□□ -0.82
SSBP3-215ENST00000533946 SRCP12931 536 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 CDK11BP21127 795 aaKnown RBP9.9□□□□□ -0.82
SSBP3-215ENST00000533946 ABCB4P21439 1286 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 PMLP29590 882 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 SLC8A1P32418 973 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 GALCP54803 685 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 TAS2R38P59533 333 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 BPIFB4P59827 614 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 IL9RQ01113 521 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 SEMA3BQ13214 749 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 DLG2Q15700 870 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 CST6Q15828 149 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 KIF19Q2TAC6 998 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 FAM182AQ5T1J6 154 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 NCEH1Q6PIU2 408 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 MON1BQ7L1V2 547 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 LUZP1Q86V48 1076 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 CPNE8Q86YQ8 564 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 DRC7Q8IY82 874 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 PNPLA1Q8N8W4 532 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 NEK11Q8NG66 645 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 KLK6Q92876 244 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 PGAP3Q96FM1 320 aaPredicted RBP9.9□□□□□ -0.82
SSBP3-215ENST00000533946 SLC6A18Q96N87 628 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 NOX5Q96PH1 765 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 AGPAT1Q99943 283 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 NUP58Q9BVL2 599 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 NOL6Q9H6R4 1146 aaKnown RBP9.9□□□□□ -0.82
SSBP3-215ENST00000533946 CBX8Q9HC52 389 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 TM9SF3Q9HD45 589 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 VPS51Q9UID3 782 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 TBC1D30Q9Y2I9 924 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.9□□□□□ -0.82
SSBP3-215ENST00000533946 CEP83Q9Y592 693 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 SNX11Q9Y5W9 270 aa9.9□□□□□ -0.82
SSBP3-215ENST00000533946 ITPR1Q14643 2758 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 ITIH6Q6UXX5 1313 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 CHD6Q8TD26 2715 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 IGLV3-10A0A075B6K4 115 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 LRRC53A6NM62 1247 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 CBX4O00257 560 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 CCP110O43303 1012 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 RNASEH2AO75792 299 aaKnown RBP9.89□□□□□ -0.83
SSBP3-215ENST00000533946 ZMPSTE24O75844 475 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 KRT37O76014 449 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 LSM8O95777 96 aaKnown RBP9.89□□□□□ -0.83
SSBP3-215ENST00000533946 PLEKP08567 350 aaPredicted RBP9.89□□□□□ -0.83
SSBP3-215ENST00000533946 ACADMP11310 421 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 TCF4P15884 667 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 STAT1P42224 750 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 PLK1P53350 603 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 CLDN6P56747 220 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 ZNF445P59923 1031 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 ARF5P84085 180 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 GFPT1Q06210 699 aaPredicted RBP9.89□□□□□ -0.83
SSBP3-215ENST00000533946 ZNF252P-AS1Q0IIN9 211 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 CNTN1Q12860 1018 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 BYSLQ13895 437 aaKnown RBP9.89□□□□□ -0.83
SSBP3-215ENST00000533946 CA9Q16790 459 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 SPDYCQ5MJ68 293 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 PPP1R15BQ5SWA1 713 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 FKBP15Q5T1M5 1219 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 MANEALQ5VSG8 457 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 ZNF776Q68DI1 518 aaPredicted RBP9.89□□□□□ -0.83
SSBP3-215ENST00000533946 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.89□□□□□ -0.83
SSBP3-215ENST00000533946 ZNF571Q7Z3V5 609 aaPredicted RBP9.89□□□□□ -0.83
SSBP3-215ENST00000533946 C11orf74Q86VG3 221 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms