RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 PLEKHM1Q9Y4G2 1056 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 CLIC4Q9Y696 253 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.93□□□□□ -1.62
USP48-211ENST00000526044 MYH15Q9Y2K3 1946 aa4.93□□□□□ -1.62
USP48-211ENST00000526044 KIAA1217Q5T5P2 1943 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 CAPN8A6NHC0 703 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 FAM86B1E9PN63 330 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 FAM227AF5H4B4 570 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 LAD1O00515 517 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 TBX3O15119 743 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 PHGDHO43175 533 aaKnown RBP4.92□□□□□ -1.62
USP48-211ENST00000526044 PROM1O43490 865 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 NEMFO60524 1076 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 UNC5CO95185 931 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 TDP2O95551 362 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 YEATS4O95619 227 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 SNAI1O95863 264 aaPredicted RBP4.92□□□□□ -1.62
USP48-211ENST00000526044 BMP15O95972 392 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 LMNAP02545 664 aaKnown RBP4.92□□□□□ -1.62
USP48-211ENST00000526044 FAM86B2P0C5J1 330 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 ARP10275 920 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 TGFB3P10600 412 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 PPP3CBP16298 524 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 CHRM3P20309 590 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 CXCR5P32302 372 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 GNALP38405 381 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 CTCFP49711 727 aaPredicted RBP4.92□□□□□ -1.62
USP48-211ENST00000526044 NXPH1P58417 271 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 MRPS35P82673 323 aaKnown RBP4.92□□□□□ -1.62
USP48-211ENST00000526044 PRKCZQ05513 592 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 ITIH3Q06033 890 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 ORC2Q13416 577 aaPredicted RBP4.92□□□□□ -1.62
USP48-211ENST00000526044 DHX8Q14562 1220 aaKnown RBP4.92□□□□□ -1.62
USP48-211ENST00000526044 ZNF169Q14929 603 aaPredicted RBP4.92□□□□□ -1.62
USP48-211ENST00000526044 SLC39A14Q15043 492 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 CALCRLQ16602 461 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 Q4G0T1 1027 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 PRR16Q569H4 304 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 SYCP2LQ5T4T6 812 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 MFSD14CQ5VZR4 134 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 SEPT14Q6ZU15 432 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 ARMCX2Q7L311 632 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 MAEAQ7L5Y9 396 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 KIAA0319LQ8IZA0 1049 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 C4orf32Q8N8J7 132 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 LINC00301Q8NCQ3 95 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 B3GALNT2Q8NCR0 500 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 TOR1AIP2Q8NFQ8 470 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 IL31RAQ8NI17 732 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 RAET1EQ8TD07 263 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 FBXL20Q96IG2 436 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 CDHR1Q96JP9 859 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 FAM20AQ96MK3 541 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 MBOAT7Q96N66 472 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 MOGAT1Q96PD6 335 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 MTMR9Q96QG7 549 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 USP28Q96RU2 1077 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 ABHD16BQ9H3Z7 469 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 ZMAT3Q9HA38 289 aaKnown RBP4.92□□□□□ -1.62
USP48-211ENST00000526044 HESX1Q9UBX0 185 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 PCDHA12Q9UN75 941 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 L1RE1Q9UN81 338 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 CNPY2Q9Y2B0 182 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.92□□□□□ -1.62
USP48-211ENST00000526044 TRIM17Q9Y577 477 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 UBIAD1Q9Y5Z9 338 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 COMMD10Q9Y6G5 202 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 THSD7BQ9C0I4 1608 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 FRMPD4Q14CM0 1322 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 PCSK5Q92824 1860 aa4.92□□□□□ -1.62
USP48-211ENST00000526044 LCTP09848 1927 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 MCM3APO60318 1980 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 CASP8AP2Q9UKL3 1982 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 ZSWIM8A7E2V4 1837 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 IGLV3-22A0A075B6J6 115 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 GOLGA6L4A6NEF3 574 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 IPO5O00410 1097 aaKnown RBP4.91□□□□□ -1.62
USP48-211ENST00000526044 SPTLC2O15270 562 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 MPPED1O15442 326 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 MSH4O15457 936 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 FIBPO43427 364 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 PPP6R2O75170 966 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 GRPP07492 148 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 HSPA1AP0DMV8 641 aaKnown RBP4.91□□□□□ -1.62
USP48-211ENST00000526044 HSPA1BP0DMV9 641 aaKnown RBP4.91□□□□□ -1.62
USP48-211ENST00000526044 HSPA8P11142 646 aaKnown RBP4.91□□□□□ -1.62
USP48-211ENST00000526044 TYRP1P17643 537 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 MARCKSP29966 332 aaPredicted RBP4.91□□□□□ -1.62
USP48-211ENST00000526044 ICAM3P32942 547 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 TECP42680 631 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 LBX1P52954 281 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 ACVR2BQ13705 512 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 BOP1Q14137 746 aaKnown RBP4.91□□□□□ -1.62
USP48-211ENST00000526044 NEDD9Q14511 834 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 PDIA5Q14554 519 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 IQCB1Q15051 598 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 PTPRRQ15256 657 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 LLGL1Q15334 1064 aa4.91□□□□□ -1.62
USP48-211ENST00000526044 CCL14Q16627 93 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms