RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 GOT1P17174 413 aa10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 TFE3P19532 575 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 ERCC5P28715 1186 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 KCNMA1Q12791 1236 aa10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 SLC12A1Q13621 1099 aa10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 ZNF423Q2M1K9 1284 aa10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 TCP11X2Q5H9J9 407 aa10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 MIIPQ5JXC2 388 aa10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 CCDC183Q5T5S1 534 aa10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 FAM102AQ5T9C2 384 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 KLHDC7AQ5VTJ3 777 aa10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 USP30Q70CQ3 517 aa10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 SLCO6A1Q86UG4 719 aa10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 AADATQ8N5Z0 425 aa10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 CPA5Q8WXQ8 436 aa10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 PTPRN2Q92932 1015 aa10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 C18orf8Q96DM3 657 aa10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 SLC6A18Q96N87 628 aa10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 PPP1R9BQ96SB3 815 aa10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 FEM1AQ9BSK4 669 aa10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 TKTL2Q9H0I9 626 aa10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 TMPRSS4Q9NRS4 437 aa10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 PIGVQ9NUD9 493 aa10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 ASNSD1Q9NWL6 643 aa10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 SLC25A13Q9UJS0 675 aa10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 PCOLCE2Q9UKZ9 415 aa10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 APOBEC2Q9Y235 224 aaKnown RBP10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 BTBD3Q9Y2F9 522 aa10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 NEUROG3Q9Y4Z2 214 aa10.54□□□□□ -0.72
CTNNA1-235ENST00000522730 ASPMQ8IZT6 3477 aa10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 CKAP5Q14008 2032 aa10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 RTN2O75298 545 aa10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 DAB1O75553 588 aa10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 ADH1BP00325 375 aa10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 ATXN1LP0C7T5 689 aaKnown RBP10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 C5AR1P21730 350 aa10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 MAT2AP31153 395 aaKnown RBP10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 METAP1P53582 386 aa10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 OXCT1P55809 520 aa10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 DEUP1Q05D60 604 aa10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 SULT2A1Q06520 285 aa10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 EIF4EBP2Q13542 120 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 DLG2Q15700 870 aa10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 TTC39BQ5VTQ0 682 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 CXorf57Q6NSI4 855 aaKnown RBP10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 LRRC31Q6UY01 552 aa10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 SLC26A9Q7LBE3 791 aa10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 TFAP2DQ7Z6R9 452 aa10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 NOP9Q86U38 636 aaKnown RBP10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 ATP11CQ8NB49 1132 aa10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 KDM1BQ8NB78 822 aa10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 OR52K2Q8NGK3 314 aa10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 OR2T34Q8NGX1 318 aa10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 PCMTD1Q96MG8 357 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 TBCBQ99426 244 aa10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 SPON2Q9BUD6 331 aa10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 ACE2Q9BYF1 805 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 MSRB2Q9Y3D2 182 aa10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 PCDH15Q96QU1 1955 aa10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 CABIN1Q9Y6J0 2220 aa10.53□□□□□ -0.72
CTNNA1-235ENST00000522730 A0A1W2PPC4 97 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 WNT9AO14904 365 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 CLDN11O75508 207 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 GFPT2O94808 682 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 ENDOD1O94919 500 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 MT-CO1P00395 513 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 F9P00740 461 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 TPM2P07951 284 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 RHOCP08134 193 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 MMEP08473 750 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 UCHL3P15374 230 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 GRIA4P48058 902 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 CXCR3P49682 368 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 KLK7P49862 253 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 DNA2P51530 1060 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 PLK1P53350 603 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 RACK1P63244 317 aaKnown RBP10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 ARID5BQ14865 1188 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 NAA35Q5VZE5 725 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 DPY19L2P1Q6NXN4 242 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 LINGO4Q6UY18 593 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 Q6ZVU0 165 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 RAB44Q7Z6P3 723 aaPredicted RBP10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 DSG4Q86SJ6 1040 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 XYLT1Q86Y38 959 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 MARCH9Q86YJ5 346 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 GATAD2AQ86YP4 633 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 ZDHHC17Q8IUH5 632 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 ZCCHC14Q8WYQ9 949 aaKnown RBP10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 OR8D1Q8WZ84 308 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 GATA6Q92908 595 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 SKA1Q96BD8 255 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 SERAC1Q96JX3 654 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 SPAG5Q96R06 1193 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 NPY6RQ99463 290 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 CDC6Q99741 560 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 STK33Q9BYT3 514 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 EBF2Q9HAK2 575 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 NLRC4Q9NPP4 1024 aa10.52□□□□□ -0.73
CTNNA1-235ENST00000522730 ANLNQ9NQW6 1124 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms