RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 CGREF1Q99674 301 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 TMUB1Q9BVT8 246 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 TPK1Q9H3S4 243 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.8□□□□□ -0.842e-13■■■□□ 15
CTNNA1-230ENST00000521724 PCDHA11Q9Y5I1 949 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 CORINQ9Y5Q5 1042 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 COMMD10Q9Y6G5 202 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 PTPRJQ12913 1337 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 SLX4Q8IY92 1834 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 NFIBO00712 420 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 NOL3O60936 208 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 VAPBO95292 243 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 MMP10P09238 476 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 PABPC1P11940 636 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 ZNF182P17025 639 aaPredicted RBP9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 CKMT2P17540 419 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 DCKP27707 260 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 NUMBP49757 651 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 CLDN10P78369 228 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 GNA12Q03113 381 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 LSM12Q3MHD2 195 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 NHSL2Q5HYW2 709 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 ANKRD26P1Q6NSI1 321 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 HERC6Q8IVU3 1022 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 CMASQ8NFW8 434 aaPredicted RBP9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 ADAMTS16Q8TE57 1224 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 TRUB1Q8WWH5 349 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 CDKL2Q92772 493 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 ATP6V0A1Q93050 837 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 CCDC138Q96M89 665 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 DOK1Q99704 481 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 ACO2Q99798 780 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 NPLQ9BXD5 320 aaPredicted RBP9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 IMPG2Q9BZV3 1241 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 ZNF518BQ9C0D4 1074 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 XPNPEP3Q9NQH7 507 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 ZNF358Q9NW07 568 aa9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 SCHIP1Q9P0W5 487 aaPredicted RBP9.8□□□□□ -0.84
CTNNA1-230ENST00000521724 KRBA1A5PL33 1030 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 PIK3R2O00459 728 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 TRIM38O00635 465 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 EXTL3O43909 919 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 MAP3K6O95382 1288 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 ERBB2P04626 1255 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 GNAO1P09471 354 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 MAP4P27816 1152 aaKnown RBP9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 RBL1P28749 1068 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 ADORA2AP29274 412 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 MIPP30301 263 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 POLR2BP30876 1174 aaKnown RBP9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 GMPRP36959 345 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 CDH6P55285 790 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 RPS3AP61247 264 aaKnown RBP9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 CBLBQ13191 982 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 TRIM25Q14258 630 aaKnown RBP9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 RAB39AQ14964 217 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 NXNQ6DKJ4 435 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 TERB1Q8NA31 727 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 TNIP2Q8NFZ5 429 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 BSNDQ8WZ55 320 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 TFAP2CQ92754 450 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 DHRS1Q96LJ7 313 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 TSPAN18Q96SJ8 248 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 OLFM1Q99784 485 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 PCDHAC1Q9H158 963 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 MOCS1Q9NZB8 636 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 TCEAL9Q9UHQ7 104 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 USP18Q9UMW8 372 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 AFG3L2Q9Y4W6 797 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 MAFBQ9Y5Q3 323 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 TRIM64CA6NLI5 447 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 YDJCA8MPS7 323 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 FAM155AB1AL88 458 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 KPNA4O00629 521 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 PRKCGP05129 697 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 CHRNA5P30532 468 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 LIG4P49917 911 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 RHDQ02161 417 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 ENPEPQ07075 957 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 TFDP2Q14188 446 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 SMAD1Q15797 465 aaKnown RBP9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 CLPPQ16740 277 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 INSCQ1MX18 579 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 SCARA3Q6AZY7 606 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 NAPRTQ6XQN6 538 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 EEPD1Q7L9B9 569 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 WDTC1Q8N5D0 677 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 TTLL6Q8N841 843 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 PCYOX1LQ8NBM8 494 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 SLC7A3Q8WY07 619 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 TANKQ92844 425 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 NPAS2Q99743 824 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 EFHD1Q9BUP0 239 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 MRIQ9BWK5 157 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 ZNF341Q9BYN7 854 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 NDEL1Q9GZM8 345 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 NAA50Q9GZZ1 169 aaKnown RBP9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 ILKAPQ9H0C8 392 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 SDCBP2Q9H190 292 aa9.79□□□□□ -0.84
CTNNA1-230ENST00000521724 GBA3Q9H227 469 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms