RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 SYCP2LQ5T4T6 812 aa17.42■□□□□ 0.38
TSNARE1-205ENST00000520166 APCDD1Q8J025 514 aa17.42■□□□□ 0.38
TSNARE1-205ENST00000520166 CCDC110Q8TBZ0 833 aa17.42■□□□□ 0.38
TSNARE1-205ENST00000520166 USP33Q8TEY7 942 aa17.42■□□□□ 0.38
TSNARE1-205ENST00000520166 SPON2Q9BUD6 331 aa17.42■□□□□ 0.38
TSNARE1-205ENST00000520166 BBS2Q9BXC9 721 aa17.42■□□□□ 0.38
TSNARE1-205ENST00000520166 TBC1D30Q9Y2I9 924 aa17.42■□□□□ 0.38
TSNARE1-205ENST00000520166 SNX24Q9Y343 169 aa17.42■□□□□ 0.38
TSNARE1-205ENST00000520166 SHROOM3Q8TF72 1996 aa17.42■□□□□ 0.38
TSNARE1-205ENST00000520166 RAMP2O60895 175 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 LUC7L3O95232 432 aaKnown RBP17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 ECEL1O95672 775 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 KRT14P02533 472 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 CYP17A1P05093 508 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 CD70P32970 193 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 SERPINB6P35237 376 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 RPL22P35268 128 aaKnown RBP17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 GNA12Q03113 381 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 PPIDQ08752 370 aaKnown RBP17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 ZBTB17Q13105 803 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 XRCC4Q13426 336 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 DHCR24Q15392 516 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 MPPE1Q53F39 396 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 ACBD5Q5T8D3 534 aaPredicted RBP17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 C12orf40Q86WS4 652 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 CCDC26Q8TAB7 109 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 CASKIN2Q8WXE0 1202 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 ARHGEF2Q92974 986 aaKnown RBP17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 FAM83CQ9BQN1 747 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 KIF9Q9HAQ2 790 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 PRDM16Q9HAZ2 1276 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 EPB41L5Q9HCM4 733 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 HPS4Q9NQG7 708 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 C2CD4DB7Z1M9 353 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 BHMG1C9JSJ3 638 aaPredicted RBP17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 SNAP91O60641 907 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 PEX11BO96011 259 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 RHOCP08134 193 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 TYRP14679 529 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 IVDP26440 423 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 CSKP41240 450 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 MAPKAPK2P49137 400 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 NDST2P52849 883 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 PPP1R7Q15435 360 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 GAB4Q2WGN9 574 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 GPR153Q6NV75 609 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 CHST9Q7L1S5 443 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 ZNF354CQ86Y25 554 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 MFN1Q8IWA4 741 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 GSPT2Q8IYD1 628 aaKnown RBP17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 LZTR1Q8N653 840 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 HTR3CQ8WXA8 447 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 SLCO2A1Q92959 643 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 ALG14Q96F25 216 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 FRMD8P1Q9BZ68 369 aaPredicted RBP17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 TBC1D14Q9P2M4 693 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 IPO11Q9UI26 975 aaKnown RBP17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 OR51B4Q9Y5P0 310 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 NUMBLQ9Y6R0 609 aa17.41■□□□□ 0.38
TSNARE1-205ENST00000520166 TTC24A2A3L6 582 aaPredicted RBP17.4■□□□□ 0.38
TSNARE1-205ENST00000520166 ANTXRLA6NF34 631 aa17.4■□□□□ 0.38
TSNARE1-205ENST00000520166 PENKP01210 267 aaPredicted RBP17.4■□□□□ 0.38
TSNARE1-205ENST00000520166 MYBL2P10244 700 aa17.4■□□□□ 0.38
TSNARE1-205ENST00000520166 RPL21P46778 160 aaKnown RBP17.4■□□□□ 0.38
TSNARE1-205ENST00000520166 SLC6A11P48066 632 aa17.4■□□□□ 0.38
TSNARE1-205ENST00000520166 CLCN6P51797 869 aa17.4■□□□□ 0.38
TSNARE1-205ENST00000520166 LMAN2Q12907 356 aa17.4■□□□□ 0.38
TSNARE1-205ENST00000520166 SERINC3Q13530 473 aa17.4■□□□□ 0.38
TSNARE1-205ENST00000520166 DHX34Q14147 1143 aaKnown RBP17.4■□□□□ 0.38
TSNARE1-205ENST00000520166 FAXCQ5TGI0 409 aa17.4■□□□□ 0.38
TSNARE1-205ENST00000520166 MAATS1Q7Z4T9 603 aa17.4■□□□□ 0.38
TSNARE1-205ENST00000520166 MFSD6LQ8IWD5 586 aa17.4■□□□□ 0.38
TSNARE1-205ENST00000520166 ATPAF2Q8N5M1 289 aa17.4■□□□□ 0.38
TSNARE1-205ENST00000520166 HLA-CQ95604 372 aa17.4■□□□□ 0.38
TSNARE1-205ENST00000520166 HDAC11Q96DB2 347 aa17.4■□□□□ 0.38
TSNARE1-205ENST00000520166 LMLNQ96KR4 655 aa17.4■□□□□ 0.38
TSNARE1-205ENST00000520166 PARD6BQ9BYG5 372 aa17.4■□□□□ 0.38
TSNARE1-205ENST00000520166 GTSE1Q9NYZ3 720 aa17.4■□□□□ 0.38
TSNARE1-205ENST00000520166 INTS6Q9UL03 887 aaKnown RBP17.4■□□□□ 0.38
TSNARE1-205ENST00000520166 UQCRHLA0A096LP55 91 aa17.39■□□□□ 0.37
TSNARE1-205ENST00000520166 TP73O15350 636 aa17.39■□□□□ 0.37
TSNARE1-205ENST00000520166 GJB3O75712 270 aa17.39■□□□□ 0.37
TSNARE1-205ENST00000520166 JCHAINP01591 159 aa17.39■□□□□ 0.37
TSNARE1-205ENST00000520166 UQCRHP07919 91 aa17.39■□□□□ 0.37
TSNARE1-205ENST00000520166 PTPN3P26045 913 aa17.39■□□□□ 0.37
TSNARE1-205ENST00000520166 HLA-FP30511 346 aa17.39■□□□□ 0.37
TSNARE1-205ENST00000520166 IFNAR2P48551 515 aa17.39■□□□□ 0.37
TSNARE1-205ENST00000520166 CARSP49589 748 aaKnown RBP17.39■□□□□ 0.37
TSNARE1-205ENST00000520166 VSNL1P62760 191 aa17.39■□□□□ 0.37
TSNARE1-205ENST00000520166 CDH18Q13634 790 aa17.39■□□□□ 0.37
TSNARE1-205ENST00000520166 PTK6Q13882 451 aa17.39■□□□□ 0.37
TSNARE1-205ENST00000520166 RNF43Q68DV7 783 aa17.39■□□□□ 0.37
TSNARE1-205ENST00000520166 DUPD1Q68J44 220 aa17.39■□□□□ 0.37
TSNARE1-205ENST00000520166 LINGO4Q6UY18 593 aa17.39■□□□□ 0.37
TSNARE1-205ENST00000520166 CDKL3Q8IVW4 592 aaPredicted RBP17.39■□□□□ 0.37
TSNARE1-205ENST00000520166 SFTPA1Q8IWL2 248 aa17.39■□□□□ 0.37
TSNARE1-205ENST00000520166 CCDC13Q8IYE1 715 aa17.39■□□□□ 0.37
TSNARE1-205ENST00000520166 CNTD1Q8N815 330 aa17.39■□□□□ 0.37
TSNARE1-205ENST00000520166 NECTIN4Q96NY8 510 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms