RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 SMARCB1Q12824 385 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 USP4Q13107 963 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 ORC1Q13415 861 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 TAZQ16635 292 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 ERCC6LQ2NKX8 1250 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 GAB4Q2WGN9 574 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 INTS6LQ5JSJ4 861 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 CCDC70Q6NSX1 233 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 PMF1Q6P1K2 205 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 DCUN1D2Q6PH85 259 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 DHRS13Q6UX07 377 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 PAQR9Q6ZVX9 377 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 LRRN4CLQ8ND94 238 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 SH3RF2Q8TEC5 729 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 CEP295NLQ96MC4 621 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 TBCBQ99426 244 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 CNPY3Q9BT09 278 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 DPEP3Q9H4B8 488 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 CRTAC1Q9NQ79 661 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 TM7SF3Q9NS93 570 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 DDX56Q9NY93 547 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 HSFX1Q9UBD0 423 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 PACSIN2Q9UNF0 486 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 COL5A1P20908 1838 aaPredicted RBP10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 TRAV19A0A0A6YYK7 116 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 CCDC151A5D8V7 595 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 E5RJQ4 531 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 SCAMP3O14828 347 aaKnown RBP10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 PAPSS1O43252 624 aaPredicted RBP10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 CEP104O60308 925 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 ABCB7O75027 752 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 WISP1O95388 367 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 NFATC1O95644 943 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 APODP05090 189 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 KRT7P08729 469 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 USP17L7P0C7H9 530 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 FAM200BP0CF97 657 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 KRT10P13645 584 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 GNSP15586 552 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 RFC1P35251 1148 aaPredicted RBP10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 KIR2DL1P43626 348 aaPredicted RBP10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 CLDN6P56747 220 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 BRD3Q15059 726 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 EFHC1Q5JVL4 640 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 SEL1L2Q5TEA6 688 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 CLEC20AQ6ZU45 233 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 BNIPLQ7Z465 357 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 LRRTM3Q86VH5 581 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 THEM5Q8N1Q8 247 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 NOA1Q8NC60 698 aaKnown RBP10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 BAHD1Q8TBE0 780 aaPredicted RBP10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 SLC2A14Q8TDB8 520 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 IRGQQ8WZA9 623 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 SEC14L1Q92503 715 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 CENPIQ92674 756 aaPredicted RBP10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 KRT35Q92764 455 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 SLCO2A1Q92959 643 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 NT5C3BQ969T7 300 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 SMARCD1Q96GM5 515 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 RBM41Q96IZ5 413 aaKnown RBP10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 MCEEQ96PE7 176 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 PNKPQ96T60 521 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 TRIM7Q9C029 511 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 SEMA4CQ9C0C4 833 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 ZCWPW1Q9H0M4 648 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 SYNCQ9H7C4 482 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 ANKZF1Q9H8Y5 726 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 CD93Q9NPY3 652 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 CNGB3Q9NQW8 809 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 HOMER3Q9NSC5 361 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 BTBD3Q9Y2F9 522 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 AK5Q9Y6K8 562 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 TMEM131Q92545 1883 aa10.84□□□□□ -0.67
PDLIM5-217ENST00000512274 GOLGA6L10A0A0M3HER8 536 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 C2orf78A6NCI8 922 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 SLC28A2O43868 658 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 HSF2BPO75031 334 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 GABBR2O75899 941 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 DKK1O94907 266 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 ENDOD1O94919 500 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 KAT7O95251 611 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 CHRM1P11229 460 aaPredicted RBP10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 DESP17661 470 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 CXCR5P32302 372 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 MAGEA11P43364 429 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 FNTAP49354 379 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 TSPY1Q01534 308 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 OGDHQ02218 1023 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 SLC25A11Q02978 314 aaKnown RBP10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 LY6DQ14210 128 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 NFE2Q16621 373 aaPredicted RBP10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 HADHQ16836 314 aaKnown RBP10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 SYCP2LQ5T4T6 812 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 DRICH1Q6PGQ1 229 aaPredicted RBP10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 C4orf50Q6ZRC1 276 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 FAM183BPQ6ZVS7 135 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 MTERF4Q7Z6M4 381 aaKnown RBP10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 FAM35AQ86V20 835 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 PIGZQ86VD9 579 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 C12orf40Q86WS4 652 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms