RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 KDM1BQ8NB78 822 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 OR7D4Q8NG98 312 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 HAPLN3Q96S86 360 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 FAM129BQ96TA1 746 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 C6orf106Q9H6K1 298 aaPredicted RBP16.94■□□□□ 0.3
DDX41-213ENST00000512027 ZNF212Q9UDV6 495 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 SLCO1B1Q9Y6L6 691 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 PLXNA2O75051 1894 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 EDDM13A0A1B0GTR0 161 aa16.93■□□□□ 0.3
DDX41-213ENST00000512027 SIGLEC16A6NMB1 481 aa16.93■□□□□ 0.3
DDX41-213ENST00000512027 CDX4O14627 284 aaPredicted RBP16.93■□□□□ 0.3
DDX41-213ENST00000512027 MT-CO1P00395 513 aa16.93■□□□□ 0.3
DDX41-213ENST00000512027 CCDC172P0C7W6 258 aa16.93■□□□□ 0.3
DDX41-213ENST00000512027 ENGP17813 658 aa16.93■□□□□ 0.3
DDX41-213ENST00000512027 SDHBP21912 280 aa16.93■□□□□ 0.3
DDX41-213ENST00000512027 ADRA1BP35368 520 aa16.93■□□□□ 0.3
DDX41-213ENST00000512027 METAP1P53582 386 aa16.93■□□□□ 0.3
DDX41-213ENST00000512027 LIMK1P53667 647 aa16.93■□□□□ 0.3
DDX41-213ENST00000512027 UBASH3AP57075 661 aa16.93■□□□□ 0.3
DDX41-213ENST00000512027 OGDHQ02218 1023 aa16.93■□□□□ 0.3
DDX41-213ENST00000512027 PPP1R15BQ5SWA1 713 aa16.93■□□□□ 0.3
DDX41-213ENST00000512027 IL31Q6EBC2 164 aa16.93■□□□□ 0.3
DDX41-213ENST00000512027 STRADAQ7RTN6 431 aa16.93■□□□□ 0.3
DDX41-213ENST00000512027 DRC7Q8IY82 874 aa16.93■□□□□ 0.3
DDX41-213ENST00000512027 PYROXD2Q8N2H3 581 aa16.93■□□□□ 0.3
DDX41-213ENST00000512027 ZCCHC9Q8N567 271 aaKnown RBP16.93■□□□□ 0.3
DDX41-213ENST00000512027 OR2I1PQ8NGU4 316 aa16.93■□□□□ 0.3
DDX41-213ENST00000512027 GANCQ8TET4 914 aa16.93■□□□□ 0.3
DDX41-213ENST00000512027 FRS2Q8WU20 508 aa16.93■□□□□ 0.3
DDX41-213ENST00000512027 CENPIQ92674 756 aaPredicted RBP16.93■□□□□ 0.3
DDX41-213ENST00000512027 C1orf74Q96LT6 269 aa16.93■□□□□ 0.3
DDX41-213ENST00000512027 NUP58Q9BVL2 599 aa16.93■□□□□ 0.3
DDX41-213ENST00000512027 NUSAP1Q9BXS6 441 aaKnown RBP16.93■□□□□ 0.3
DDX41-213ENST00000512027 MIR1-1HGQ9H1L0 117 aa16.93■□□□□ 0.3
DDX41-213ENST00000512027 PABPC3Q9H361 631 aaKnown RBP16.93■□□□□ 0.3
DDX41-213ENST00000512027 FBRSQ9HAH7 460 aa16.93■□□□□ 0.3
DDX41-213ENST00000512027 NDFIP2Q9NV92 336 aa16.93■□□□□ 0.3
DDX41-213ENST00000512027 AIPL1Q9NZN9 384 aa16.93■□□□□ 0.3
DDX41-213ENST00000512027 IFNKQ9P0W0 207 aa16.93■□□□□ 0.3
DDX41-213ENST00000512027 EVLQ9UI08 416 aaPredicted RBP16.93■□□□□ 0.3
DDX41-213ENST00000512027 SLC25A13Q9UJS0 675 aa16.93■□□□□ 0.3
DDX41-213ENST00000512027 CNOT1A5YKK6 2376 aaKnown RBP16.93■□□□□ 0.3
DDX41-213ENST00000512027 TP53BP1Q12888 1972 aaPredicted RBP16.92■□□□□ 0.3
DDX41-213ENST00000512027 CHD5Q8TDI0 1954 aa16.92■□□□□ 0.3
DDX41-213ENST00000512027 A0A1W2PP55 124 aa16.92■□□□□ 0.3
DDX41-213ENST00000512027 K7ERQ8 282 aa16.92■□□□□ 0.3
DDX41-213ENST00000512027 PLK4O00444 970 aa16.92■□□□□ 0.3
DDX41-213ENST00000512027 DDX3XO00571 662 aaKnown RBP eCLIP16.92■□□□□ 0.3
DDX41-213ENST00000512027 BNIP3LO60238 219 aa16.92■□□□□ 0.3
DDX41-213ENST00000512027 OXTRP30559 389 aa16.92■□□□□ 0.3
DDX41-213ENST00000512027 OR1E1P30953 314 aa16.92■□□□□ 0.3
DDX41-213ENST00000512027 PRKCIP41743 596 aa16.92■□□□□ 0.3
DDX41-213ENST00000512027 OXCT1P55809 520 aa16.92■□□□□ 0.3
DDX41-213ENST00000512027 SULT2A1Q06520 285 aa16.92■□□□□ 0.3
DDX41-213ENST00000512027 KLHL30Q0D2K2 578 aa16.92■□□□□ 0.3
DDX41-213ENST00000512027 ARID5BQ14865 1188 aa16.92■□□□□ 0.3
DDX41-213ENST00000512027 CST6Q15828 149 aa16.92■□□□□ 0.3
DDX41-213ENST00000512027 DUOXA1Q1HG43 343 aa16.92■□□□□ 0.3
DDX41-213ENST00000512027 ACCSLQ4AC99 568 aa16.92■□□□□ 0.3
DDX41-213ENST00000512027 SLC23A3Q6PIS1 610 aa16.92■□□□□ 0.3
DDX41-213ENST00000512027 LINGO4Q6UY18 593 aa16.92■□□□□ 0.3
DDX41-213ENST00000512027 Q6ZVU0 165 aa16.92■□□□□ 0.3
DDX41-213ENST00000512027 ERMP1Q7Z2K6 904 aa16.92■□□□□ 0.3
DDX41-213ENST00000512027 CPLX3Q8WVH0 158 aa16.92■□□□□ 0.3
DDX41-213ENST00000512027 SNX19Q92543 992 aa16.92■□□□□ 0.3
DDX41-213ENST00000512027 FOXJ1Q92949 421 aa16.92■□□□□ 0.3
DDX41-213ENST00000512027 GTPBP2Q9BX10 602 aaKnown RBP16.92■□□□□ 0.3
DDX41-213ENST00000512027 ZYG11BQ9C0D3 744 aa16.92■□□□□ 0.3
DDX41-213ENST00000512027 OR12D3Q9UGF7 316 aa16.92■□□□□ 0.3
DDX41-213ENST00000512027 EIF2B4Q9UI10 523 aaKnown RBP16.92■□□□□ 0.3
DDX41-213ENST00000512027 VPS51Q9UID3 782 aa16.92■□□□□ 0.3
DDX41-213ENST00000512027 NEU3Q9UQ49 428 aa16.92■□□□□ 0.3
DDX41-213ENST00000512027 ASCC3Q8N3C0 2202 aaKnown RBP16.91■□□□□ 0.3
DDX41-213ENST00000512027 TARSL2A2RTX5 802 aaKnown RBP16.91■□□□□ 0.3
DDX41-213ENST00000512027 METTL12A8MUP2 240 aa16.91■□□□□ 0.3
DDX41-213ENST00000512027 SMAD6O43541 496 aaKnown RBP16.91■□□□□ 0.3
DDX41-213ENST00000512027 SEMA4FO95754 770 aa16.91■□□□□ 0.3
DDX41-213ENST00000512027 C7P10643 843 aa16.91■□□□□ 0.3
DDX41-213ENST00000512027 SRCP12931 536 aa16.91■□□□□ 0.3
DDX41-213ENST00000512027 NNMTP40261 264 aa16.91■□□□□ 0.3
DDX41-213ENST00000512027 ZNF143P52747 638 aaPredicted RBP16.91■□□□□ 0.3
DDX41-213ENST00000512027 DLG2Q15700 870 aa16.91■□□□□ 0.3
DDX41-213ENST00000512027 SKOR2Q2VWA4 1001 aaPredicted RBP16.91■□□□□ 0.3
DDX41-213ENST00000512027 UAP1L1Q3KQV9 507 aa16.91■□□□□ 0.3
DDX41-213ENST00000512027 ARL13BQ3SXY8 428 aa16.91■□□□□ 0.3
DDX41-213ENST00000512027 POM121L1PQ3SYA9 428 aa16.91■□□□□ 0.3
DDX41-213ENST00000512027 TTC31Q49AM3 519 aaPredicted RBP16.91■□□□□ 0.3
DDX41-213ENST00000512027 WDR45BQ5MNZ6 344 aa16.91■□□□□ 0.3
DDX41-213ENST00000512027 SYCP2LQ5T4T6 812 aa16.91■□□□□ 0.3
DDX41-213ENST00000512027 MANEALQ5VSG8 457 aa16.91■□□□□ 0.3
DDX41-213ENST00000512027 RWDD4Q6NW29 188 aaKnown RBP16.91■□□□□ 0.3
DDX41-213ENST00000512027 SCYL2Q6P3W7 929 aa16.91■□□□□ 0.3
DDX41-213ENST00000512027 DCUN1D2Q6PH85 259 aa16.91■□□□□ 0.3
DDX41-213ENST00000512027 SETD3Q86TU7 594 aaPredicted RBP16.91■□□□□ 0.3
DDX41-213ENST00000512027 SH2D3CQ8N5H7 860 aa16.91■□□□□ 0.3
DDX41-213ENST00000512027 AADATQ8N5Z0 425 aa16.91■□□□□ 0.3
DDX41-213ENST00000512027 TRIM7Q9C029 511 aa16.91■□□□□ 0.3
DDX41-213ENST00000512027 BTBD1Q9H0C5 482 aa16.91■□□□□ 0.3
DDX41-213ENST00000512027 CAPN10Q9HC96 672 aa16.91■□□□□ 0.3
DDX41-213ENST00000512027 TMEM9BQ9NQ34 198 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms