RNA–Protein interactions for RNA: ENST00000509177.1

TUSC3-208, Transcript of tumor suppressor candidate 3, human

TSL 2

Gene TUSC3, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-208	ENST00000509177	LMLN	Q96KR4	655 aa		11.17	□□□□□ -0.62
TUSC3-208	ENST00000509177	RPL10L	Q96L21	214 aa	Known RBP	11.17	□□□□□ -0.62
TUSC3-208	ENST00000509177	BBC3	Q96PG8	261 aa	Predicted RBP	11.17	□□□□□ -0.62
TUSC3-208	ENST00000509177	PRMT1	Q99873	361 aa	Known RBP	11.17	□□□□□ -0.62
TUSC3-208	ENST00000509177	OMD	Q99983	421 aa		11.17	□□□□□ -0.62
TUSC3-208	ENST00000509177	TKTL2	Q9H0I9	626 aa		11.17	□□□□□ -0.62
TUSC3-208	ENST00000509177	GAN	Q9H2C0	597 aa		11.17	□□□□□ -0.62
TUSC3-208	ENST00000509177	TMEM51	Q9NW97	253 aa		11.17	□□□□□ -0.62
TUSC3-208	ENST00000509177	EIF2B4	Q9UI10	523 aa	Known RBP	11.17	□□□□□ -0.62
TUSC3-208	ENST00000509177	SLCO3A1	Q9UIG8	710 aa		11.17	□□□□□ -0.62
TUSC3-208	ENST00000509177	SLC25A13	Q9UJS0	675 aa		11.17	□□□□□ -0.62
TUSC3-208	ENST00000509177	SCML1	Q9UN30	329 aa		11.17	□□□□□ -0.62
TUSC3-208	ENST00000509177	RAX	Q9Y2V3	346 aa		11.17	□□□□□ -0.62
TUSC3-208	ENST00000509177	PCDHB9	Q9Y5E1	797 aa		11.17	□□□□□ -0.62
TUSC3-208	ENST00000509177	HS3ST4	Q9Y661	456 aa		11.17	□□□□□ -0.62
TUSC3-208	ENST00000509177	TARSL2	A2RTX5	802 aa	Known RBP	11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	FAM47DP	A6NHR8	397 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	BCAT2	O15382	392 aa	Predicted RBP	11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	KALRN	O60229	2985 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	CLDN11	O75508	207 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	ADCY5	O95622	1261 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	SEMA4F	O95754	770 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	IGLV3-19	P01714	112 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	MZF1	P28698	734 aa	Predicted RBP	11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	ACSL1	P33121	698 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	SCNN1A	P37088	669 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	GGCX	P38435	758 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	CXCR3	P49682	368 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	CDR2	Q01850	454 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	SLC25A52	Q3SY17	297 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	BRMS1L	Q5PSV4	323 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	PHLDB2	Q86SQ0	1253 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	C14orf80	Q86SX3	495 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	MMAA	Q8IVH4	418 aa	Known RBP	11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	PIP4P2	Q8N4L2	257 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	EPS8L1	Q8TE68	723 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	SLC20A1	Q8WUM9	679 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	HNRNPLL	Q8WVV9	542 aa	Known RBP	11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	DNASE2B	Q8WZ79	361 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	IGSF8	Q969P0	613 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	MRGPRX3	Q96LB0	322 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	TBCB	Q99426	244 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	NPY6R	Q99463	290 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	MUC3B	Q9H195	1237 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	PCED1A	Q9H1Q7	454 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	RSPH9	Q9H1X1	276 aa	Predicted RBP	11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	PABPC3	Q9H361	631 aa	Known RBP	11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	C6orf106	Q9H6K1	298 aa	Predicted RBP	11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	IL21R	Q9HBE5	538 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	SGK2	Q9HBY8	427 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	ASH1L	Q9NR48	2969 aa	Known RBP	11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	PIGV	Q9NUD9	493 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	SEPT11	Q9NVA2	429 aa	Known RBP	11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	FBXL12	Q9NXK8	326 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	LIMA1	Q9UHB6	759 aa	Known RBP	11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	VPS28	Q9UK41	221 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	PCOLCE2	Q9UKZ9	415 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	DAAM1	Q9Y4D1	1078 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	ASXL3	Q9C0F0	2248 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	PTPRB	P23467	1997 aa		11.16	□□□□□ -0.62
TUSC3-208	ENST00000509177	LGALS16	A8MUM7	142 aa		11.15	□□□□□ -0.62
TUSC3-208	ENST00000509177	SRGAP2	O75044	1071 aa		11.15	□□□□□ -0.62
TUSC3-208	ENST00000509177	RNASEH2A	O75792	299 aa	Known RBP	11.15	□□□□□ -0.62
TUSC3-208	ENST00000509177	TFE3	P19532	575 aa	Predicted RBP	11.15	□□□□□ -0.62
TUSC3-208	ENST00000509177	SLC8A1	P32418	973 aa		11.15	□□□□□ -0.62
TUSC3-208	ENST00000509177	PSMD8	P48556	350 aa		11.15	□□□□□ -0.62
TUSC3-208	ENST00000509177	STK19	P49842	368 aa	Predicted RBP	11.15	□□□□□ -0.62
TUSC3-208	ENST00000509177	CDH4	P55283	916 aa		11.15	□□□□□ -0.62
TUSC3-208	ENST00000509177	NOMO3	P69849	1222 aa		11.15	□□□□□ -0.62
TUSC3-208	ENST00000509177	KRT83	P78385	493 aa		11.15	□□□□□ -0.62
TUSC3-208	ENST00000509177	TYRO3	Q06418	890 aa		11.15	□□□□□ -0.62
TUSC3-208	ENST00000509177	TEAD4	Q15561	434 aa		11.15	□□□□□ -0.62
TUSC3-208	ENST00000509177	CST6	Q15828	149 aa		11.15	□□□□□ -0.62
TUSC3-208	ENST00000509177	C9orf64	Q5T6V5	341 aa		11.15	□□□□□ -0.62
TUSC3-208	ENST00000509177	TRIM72	Q6ZMU5	477 aa		11.15	□□□□□ -0.62
TUSC3-208	ENST00000509177	GLRX5	Q86SX6	157 aa		11.15	□□□□□ -0.62
TUSC3-208	ENST00000509177	STK40	Q8N2I9	435 aa		11.15	□□□□□ -0.62
TUSC3-208	ENST00000509177	AOPEP	Q8N6M6	819 aa		11.15	□□□□□ -0.62
TUSC3-208	ENST00000509177	SLC30A5	Q8TAD4	765 aa		11.15	□□□□□ -0.62
TUSC3-208	ENST00000509177	MYO19	Q96H55	970 aa		11.15	□□□□□ -0.62
TUSC3-208	ENST00000509177	FEM1A	Q9BSK4	669 aa		11.15	□□□□□ -0.62
TUSC3-208	ENST00000509177	ZDHHC5	Q9C0B5	715 aa		11.15	□□□□□ -0.62
TUSC3-208	ENST00000509177	ARHGEF38	Q9NXL2	777 aa		11.15	□□□□□ -0.62
TUSC3-208	ENST00000509177	APOBEC2	Q9Y235	224 aa	Known RBP	11.15	□□□□□ -0.62
TUSC3-208	ENST00000509177	URB1	O60287	2271 aa	Known RBP	11.15	□□□□□ -0.62
TUSC3-208	ENST00000509177	KNL1	Q8NG31	2342 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177		A0A1W2PP55	124 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	LRRC72	A6NJI9	287 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	EPHB6	O15197	1021 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	MID1	O15344	667 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	BNIP3L	O60238	219 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	IL1B	P01584	269 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	RHOC	P08134	193 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	SDC4	P31431	198 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	FLT3	P36888	993 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	NSF	P46459	744 aa	Known RBP	11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	IRAK1	P51617	712 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	PLK1	P53350	603 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	JAM2	P57087	298 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	ATP11A	P98196	1134 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms