RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 PAAF1Q9BRP4 392 aa4.68□□□□□ -1.66
NFKB1-208ENST00000509165 TRNAU1APQ9NX07 287 aaKnown RBP4.68□□□□□ -1.66
NFKB1-208ENST00000509165 ELOVL5Q9NYP7 299 aa4.68□□□□□ -1.66
NFKB1-208ENST00000509165 VPS4AQ9UN37 437 aa4.68□□□□□ -1.66
NFKB1-208ENST00000509165 ZNF521Q96K83 1311 aa4.68□□□□□ -1.66
NFKB1-208ENST00000509165 CACNA1SQ13698 1873 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 PCDH17O14917 1159 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 TAF5LO75529 589 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 NTSR2O95665 410 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 PLAUP00749 431 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 FGBP02675 491 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 CTSAP10619 480 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 ALADP13716 330 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 MMP8P22894 467 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 NDUFS1P28331 727 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 HOXD12P35452 270 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 MAP2K2P36507 400 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 NR4A2P43354 598 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 ZNF84P51523 738 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 HSF1Q00613 529 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 SRSF1Q07955 248 aaKnown RBP eCLIP4.67□□□□□ -1.66
NFKB1-208ENST00000509165 RABEP1Q15276 862 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 CNGA3Q16281 694 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 FAM110CQ1W6H9 321 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 EARS2Q5JPH6 523 aaKnown RBP4.67□□□□□ -1.66
NFKB1-208ENST00000509165 ARL6IP4Q66PJ3 421 aaKnown RBP4.67□□□□□ -1.66
NFKB1-208ENST00000509165 C16orf89Q6UX73 402 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 KYAT3Q6YP21 454 aaKnown RBP4.67□□□□□ -1.66
NFKB1-208ENST00000509165 SRLQ86TD4 932 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 RFX6Q8HWS3 928 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 KCNH5Q8NCM2 988 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 SVIPQ8NHG7 77 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 GLMPQ8WWB7 406 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 AKAP1Q92667 903 aaKnown RBP eCLIP4.67□□□□□ -1.66
NFKB1-208ENST00000509165 GJA10Q969M2 543 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 FCRL5Q96RD9 977 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 CDCP1Q9H5V8 836 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 TMEM184CQ9NVA4 438 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 MTMR4Q9NYA4 1195 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 AFG3L2Q9Y4W6 797 aa4.67□□□□□ -1.66
NFKB1-208ENST00000509165 SIRT4Q9Y6E7 314 aaPredicted RBP4.67□□□□□ -1.66
NFKB1-208ENST00000509165 PRUNE2Q8WUY3 3088 aa4.66□□□□□ -1.66
NFKB1-208ENST00000509165 PAPPA2Q9BXP8 1791 aa4.66□□□□□ -1.66
NFKB1-208ENST00000509165 LY6G6EA0A0G2JKS1 128 aa4.66□□□□□ -1.66
NFKB1-208ENST00000509165 J3KTA2 159 aa4.66□□□□□ -1.66
NFKB1-208ENST00000509165 NPC1O15118 1278 aa4.66□□□□□ -1.66
NFKB1-208ENST00000509165 INPPL1O15357 1258 aa4.66□□□□□ -1.66
NFKB1-208ENST00000509165 ITGA5P08648 1049 aa4.66□□□□□ -1.66
NFKB1-208ENST00000509165 SRGAP2BP0DMP2 458 aa4.66□□□□□ -1.66
NFKB1-208ENST00000509165 ITGB6P18564 788 aa4.66□□□□□ -1.66
NFKB1-208ENST00000509165 ABCB4P21439 1286 aa4.66□□□□□ -1.66
NFKB1-208ENST00000509165 HOXA7P31268 230 aaPredicted RBP4.66□□□□□ -1.66
NFKB1-208ENST00000509165 GSTM5P46439 218 aa4.66□□□□□ -1.66
NFKB1-208ENST00000509165 ZNF91Q05481 1191 aa4.66□□□□□ -1.66
NFKB1-208ENST00000509165 ELF2Q15723 593 aa4.66□□□□□ -1.66
NFKB1-208ENST00000509165 PXDC1Q5TGL8 231 aa4.66□□□□□ -1.66
NFKB1-208ENST00000509165 FBXO38Q6PIJ6 1188 aa4.66□□□□□ -1.66
NFKB1-208ENST00000509165 RASGRP3Q8IV61 690 aa4.66□□□□□ -1.66
NFKB1-208ENST00000509165 LAS2Q8IYD9 372 aa4.66□□□□□ -1.66
NFKB1-208ENST00000509165 ZNF845Q96IR2 970 aaPredicted RBP4.66□□□□□ -1.66
NFKB1-208ENST00000509165 KCNK9Q9NPC2 374 aa4.66□□□□□ -1.66
NFKB1-208ENST00000509165 IGSF9Q9P2J2 1179 aa4.66□□□□□ -1.66
NFKB1-208ENST00000509165 HEMK1Q9Y5R4 338 aaPredicted RBP4.66□□□□□ -1.66
NFKB1-208ENST00000509165 CGNL1Q0VF96 1302 aa4.66□□□□□ -1.66
NFKB1-208ENST00000509165 MAP3K19Q56UN5 1328 aa4.66□□□□□ -1.66
NFKB1-208ENST00000509165 ZNF541Q9H0D2 1346 aa4.66□□□□□ -1.66
NFKB1-208ENST00000509165 ZMYM2Q9UBW7 1377 aa4.65□□□□□ -1.66
NFKB1-208ENST00000509165 C2CD4BA6NLJ0 364 aa4.65□□□□□ -1.67
NFKB1-208ENST00000509165 GLP2RO95838 553 aa4.65□□□□□ -1.67
NFKB1-208ENST00000509165 PRF1P14222 555 aa4.65□□□□□ -1.67
NFKB1-208ENST00000509165 RPS6KB1P23443 525 aa4.65□□□□□ -1.67
NFKB1-208ENST00000509165 SOX2P48431 317 aa4.65□□□□□ -1.67
NFKB1-208ENST00000509165 AGTR2P50052 363 aa4.65□□□□□ -1.67
NFKB1-208ENST00000509165 RPS13P62277 151 aaKnown RBP4.65□□□□□ -1.67
NFKB1-208ENST00000509165 ID2Q02363 134 aa4.65□□□□□ -1.67
NFKB1-208ENST00000509165 RBMS2Q15434 407 aaKnown RBP4.65□□□□□ -1.67
NFKB1-208ENST00000509165 SHC4Q6S5L8 630 aa4.65□□□□□ -1.67
NFKB1-208ENST00000509165 RBM44Q6ZP01 1051 aaKnown RBP4.65□□□□□ -1.67
NFKB1-208ENST00000509165 NANOGP1Q8N7R0 232 aa4.65□□□□□ -1.67
NFKB1-208ENST00000509165 NRACQ8N912 160 aa4.65□□□□□ -1.67
NFKB1-208ENST00000509165 BCAS4Q8TDM0 211 aa4.65□□□□□ -1.67
NFKB1-208ENST00000509165 IPO4Q8TEX9 1081 aaKnown RBP4.65□□□□□ -1.67
NFKB1-208ENST00000509165 ASB12Q8WXK4 309 aa4.65□□□□□ -1.67
NFKB1-208ENST00000509165 NPIPB3Q92617 1050 aa4.65□□□□□ -1.67
NFKB1-208ENST00000509165 CELF1Q92879 486 aaKnown RBP4.65□□□□□ -1.67
NFKB1-208ENST00000509165 TNIP3Q96KP6 325 aa4.65□□□□□ -1.67
NFKB1-208ENST00000509165 FCRL4Q96PJ5 515 aa4.65□□□□□ -1.67
NFKB1-208ENST00000509165 SENP7Q9BQF6 1050 aa4.65□□□□□ -1.67
NFKB1-208ENST00000509165 PANK3Q9H999 370 aa4.65□□□□□ -1.67
NFKB1-208ENST00000509165 HELLSQ9NRZ9 838 aa4.65□□□□□ -1.67
NFKB1-208ENST00000509165 ARL8BQ9NVJ2 186 aa4.65□□□□□ -1.67
NFKB1-208ENST00000509165 ASNSD1Q9NWL6 643 aa4.65□□□□□ -1.67
NFKB1-208ENST00000509165 SRP68Q9UHB9 627 aaKnown RBP4.65□□□□□ -1.67
NFKB1-208ENST00000509165 SLC39A10Q9ULF5 831 aa4.65□□□□□ -1.67
NFKB1-208ENST00000509165 AKAP11Q9UKA4 1901 aa4.65□□□□□ -1.67
NFKB1-208ENST00000509165 FLT4P35916 1363 aa4.65□□□□□ -1.67
NFKB1-208ENST00000509165 KDRP35968 1356 aa4.65□□□□□ -1.67
NFKB1-208ENST00000509165 MUC3AQ02505 3323 aa4.64□□□□□ -1.67
NFKB1-208ENST00000509165 ZNF831Q5JPB2 1677 aa4.64□□□□□ -1.67
NFKB1-208ENST00000509165 COL5A3P25940 1745 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms