RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 SAGE1Q9NXZ1 904 aa3.19□□□□□ -1.9
GYPB-207ENST00000506679 MSRB1Q9NZV6 116 aa3.19□□□□□ -1.9
GYPB-207ENST00000506679 KLQ9UEF7 1012 aa3.19□□□□□ -1.9
GYPB-207ENST00000506679 UTS2RQ9UKP6 389 aa3.19□□□□□ -1.9
GYPB-207ENST00000506679 FBXO4Q9UKT5 387 aa3.19□□□□□ -1.9
GYPB-207ENST00000506679 TNFSF13BQ9Y275 285 aa3.19□□□□□ -1.9
GYPB-207ENST00000506679 DNAJC16Q9Y2G8 782 aa3.19□□□□□ -1.9
GYPB-207ENST00000506679 TRBV5-7A0A0A0MS05 114 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 STX16-NPEPL1H3BU86 382 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 RHODO00212 210 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 STX16O14662 325 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 MSI1O43347 362 aaKnown RBP3.18□□□□□ -1.9
GYPB-207ENST00000506679 LCKP06239 509 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 CYP19A1P11511 503 aaPredicted RBP3.18□□□□□ -1.9
GYPB-207ENST00000506679 CKMT1AP12532 417 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 GJC1P36383 396 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 NR4A2P43354 598 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 RPS6KA3P51812 740 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 LAMB3Q13751 1172 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 PKP1Q13835 747 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 RABEP1Q15276 862 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 ZRSR2Q15696 482 aaKnown RBP3.18□□□□□ -1.9
GYPB-207ENST00000506679 ARL13AQ5H913 290 aaPredicted RBP3.18□□□□□ -1.9
GYPB-207ENST00000506679 TTC39AQ5SRH9 613 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 MAP3K21Q5TCX8 1036 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 DENND1BQ6P3S1 775 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 CYP26C1Q6V0L0 522 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 BBS12Q6ZW61 710 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 CYB5R4Q7L1T6 521 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 RNF144BQ7Z419 303 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 CPOQ8IVL8 374 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 ARFGAP1Q8N6T3 406 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 NRACQ8N912 160 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 MYRIPQ8NFW9 859 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 CEP70Q8NHQ1 597 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 SMG7Q92540 1137 aaKnown RBP3.18□□□□□ -1.9
GYPB-207ENST00000506679 KCNJ9Q92806 393 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 MASTLQ96GX5 879 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 ZNF48Q96MX3 618 aaPredicted RBP3.18□□□□□ -1.9
GYPB-207ENST00000506679 SCLT1Q96NL6 688 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 PPP1R10Q96QC0 940 aaKnown RBP3.18□□□□□ -1.9
GYPB-207ENST00000506679 FRG2BQ96QU4 278 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 TRIM31Q9BZY9 425 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 ZNF304Q9HCX3 659 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 SEMA4BQ9NPR2 832 aaPredicted RBP3.18□□□□□ -1.9
GYPB-207ENST00000506679 ELOVL5Q9NYP7 299 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 HDAC6Q9UBN7 1215 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 SLC8A2Q9UPR5 921 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 TNFRSF18Q9Y5U5 241 aa3.18□□□□□ -1.9
GYPB-207ENST00000506679 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.17□□□□□ -1.9
GYPB-207ENST00000506679 A0A1W2PPC1 479 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 TCRBV7S3A2A0A539 114 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 DPPA5A6NC42 116 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 VWA3AA6NCI4 1184 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 A6NNC1 897 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 EIF3FO00303 357 aaPredicted RBP3.17□□□□□ -1.9
GYPB-207ENST00000506679 SOCS2O14508 198 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 DHX16O60231 1041 aaKnown RBP3.17□□□□□ -1.9
GYPB-207ENST00000506679 CCNT1O60563 726 aaKnown RBP3.17□□□□□ -1.9
GYPB-207ENST00000506679 EPN2O95208 641 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 NFATC1O95644 943 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 HLA-DQA2P01906 255 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 CYP4B1P13584 511 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 TNNT1P13805 278 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 RXRAP19793 462 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 PTGER1P34995 402 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 CCR5P51681 352 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 RAPGEF1Q13905 1077 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 GALNT3Q14435 633 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 INPP5JQ15735 1006 aaPredicted RBP3.17□□□□□ -1.9
GYPB-207ENST00000506679 C5orf22Q49AR2 442 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 GORABQ5T7V8 394 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 PXDC1Q5TGL8 231 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 AADACL2Q6P093 401 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 LRRTM4Q86VH4 590 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 BRSK2Q8IWQ3 736 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 VPS52Q8N1B4 723 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 TMEM217Q8N7C4 229 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 ZNF548Q8NEK5 533 aaPredicted RBP3.17□□□□□ -1.9
GYPB-207ENST00000506679 SCARB1Q8WTV0 552 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 HDAC7Q8WUI4 952 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 VCPIP1Q96JH7 1222 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 UBXN10Q96LJ8 280 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 COG8Q96MW5 612 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 SLC29A3Q9BZD2 475 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 MYH16Q9H6N6 1097 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 NOD2Q9HC29 1040 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 TLR8Q9NR97 1041 aaKnown RBP3.17□□□□□ -1.9
GYPB-207ENST00000506679 RNF146Q9NTX7 359 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 RNF7Q9UBF6 113 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 UPB1Q9UBR1 384 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 SLC25A13Q9UJS0 675 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 GJD2Q9UKL4 321 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 OSGIN2Q9Y236 505 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 RRP7AQ9Y3A4 280 aaKnown RBP3.17□□□□□ -1.9
GYPB-207ENST00000506679 HS3ST3B1Q9Y662 390 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 MST1RQ04912 1400 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 TTC3P53804 2025 aa3.17□□□□□ -1.9
GYPB-207ENST00000506679 MDM4O15151 490 aa3.16□□□□□ -1.9
GYPB-207ENST00000506679 NCAM2O15394 837 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms