RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 NLGN3Q9NZ94 848 aa11.94□□□□□ -0.5
CCHCR1-219ENST00000505392 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.94□□□□□ -0.5
CCHCR1-219ENST00000505392 PCDHGA8Q9Y5G5 932 aa11.94□□□□□ -0.5
CCHCR1-219ENST00000505392 ENTPD2Q9Y5L3 495 aa11.94□□□□□ -0.5
CCHCR1-219ENST00000505392 U3KQA8 63 aa11.94□□□□□ -0.5
CCHCR1-219ENST00000505392 CPED1A4D0V7 1026 aa11.93□□□□□ -0.5
CCHCR1-219ENST00000505392 CDRT15L2A8MXV6 281 aa11.93□□□□□ -0.5
CCHCR1-219ENST00000505392 K7ESM1 405 aa11.93□□□□□ -0.5
CCHCR1-219ENST00000505392 PIK3R2O00459 728 aa11.93□□□□□ -0.5
CCHCR1-219ENST00000505392 TERTO14746 1132 aaKnown RBP11.93□□□□□ -0.5
CCHCR1-219ENST00000505392 SCAMP1O15126 338 aa11.93□□□□□ -0.5
CCHCR1-219ENST00000505392 MAPK13O15264 365 aa11.93□□□□□ -0.5
CCHCR1-219ENST00000505392 NEBLO76041 1014 aa11.93□□□□□ -0.5
CCHCR1-219ENST00000505392 PRLRP16471 622 aa11.93□□□□□ -0.5
CCHCR1-219ENST00000505392 CLN3Q13286 438 aa11.93□□□□□ -0.5
CCHCR1-219ENST00000505392 CUL4AQ13619 759 aa11.93□□□□□ -0.5
CCHCR1-219ENST00000505392 ACCSLQ4AC99 568 aa11.93□□□□□ -0.5
CCHCR1-219ENST00000505392 KRT39Q6A163 491 aa11.93□□□□□ -0.5
CCHCR1-219ENST00000505392 DSG4Q86SJ6 1040 aa11.93□□□□□ -0.5
CCHCR1-219ENST00000505392 ARL14Q8N4G2 192 aa11.93□□□□□ -0.5
CCHCR1-219ENST00000505392 TMEM145Q8NBT3 493 aa11.93□□□□□ -0.5
CCHCR1-219ENST00000505392 ARRDC3Q96B67 414 aa11.93□□□□□ -0.5
CCHCR1-219ENST00000505392 GRAMD1AQ96CP6 724 aa11.93□□□□□ -0.5
CCHCR1-219ENST00000505392 ARHGAP9Q9BRR9 750 aa11.93□□□□□ -0.5
CCHCR1-219ENST00000505392 USP29Q9HBJ7 922 aa11.93□□□□□ -0.5
CCHCR1-219ENST00000505392 TMEM8AQ9HCN3 771 aa11.93□□□□□ -0.5
CCHCR1-219ENST00000505392 EXOC1Q9NV70 894 aa11.93□□□□□ -0.5
CCHCR1-219ENST00000505392 MTMR6Q9Y217 621 aa11.93□□□□□ -0.5
CCHCR1-219ENST00000505392 TP53BP1Q12888 1972 aaPredicted RBP11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 PMS2P1A4D2B8 440 aa11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 SUV39H1O43463 412 aa11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 GABBR2O75899 941 aa11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 TNFSF15O95150 251 aa11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 NTRK1P04629 796 aa11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 CD19P15391 556 aa11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 ZNF18P17022 549 aa11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 RGS7P49802 495 aa11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 CLDN2P57739 230 aa11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 TAS2R38P59533 333 aa11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 NUCB2P80303 420 aa11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 CDKN3Q16667 212 aa11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 AGBL4Q5VU57 503 aa11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 XKR5Q6UX68 686 aa11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 ZNF574Q6ZN55 896 aaPredicted RBP11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 LGI2Q8N0V4 545 aa11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 SCML4Q8N228 414 aa11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 OR13H1Q8NG92 308 aa11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 FRS2Q8WU20 508 aa11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 OR8D1Q8WZ84 308 aa11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 FCRL2Q96LA5 508 aaPredicted RBP11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 NOX5Q96PH1 765 aa11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 PREBQ9HCU5 417 aa11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 FZD3Q9NPG1 666 aa11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 STARD5Q9NSY2 213 aa11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 RAB20Q9NX57 234 aa11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 PPM1HQ9ULR3 514 aa11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 TRAF3IP3Q9Y228 551 aa11.92□□□□□ -0.5
CCHCR1-219ENST00000505392 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 A0A1W2PQU0 124 aa11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 C1QTNF3-AMACRE9PGA6 284 aa11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 MCF2LO15068 1137 aa11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 LZTS3O60299 673 aaPredicted RBP11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 GJB6O95452 261 aa11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 MOCS2O96007 188 aaPredicted RBP11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 LTFP02788 710 aa11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 PDGFRAP16234 1089 aa11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 ITGB6P18564 788 aa11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 NR2F2P24468 414 aa11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 PSMC2P35998 433 aaKnown RBP11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 HNRNPKP61978 463 aaKnown RBP eCLIP11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 SULT2A1Q06520 285 aa11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 ZNF177Q13360 481 aaPredicted RBP11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 PMF1Q6P1K2 205 aa11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 CRTC1Q6UUV9 634 aa11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 RBM44Q6ZP01 1051 aaKnown RBP11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 Q6ZSR6 202 aa11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 USP53Q70EK8 1073 aa11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 EFL1Q7Z2Z2 1120 aaKnown RBP11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 FAM186BQ8IYM0 893 aa11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 CEP57L1Q8IYX8 460 aa11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 FBXL13Q8NEE6 735 aa11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 WDR36Q8NI36 951 aaKnown RBP11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 CLEC4CQ8WTT0 213 aa11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 IRGQQ8WZA9 623 aa11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 EXTL1Q92935 676 aa11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 IFT43Q96FT9 208 aa11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 ZNF396Q96N95 335 aaPredicted RBP11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 DNAJC28Q9NX36 388 aa11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 FAM13BQ9NYF5 915 aa11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 TJP2Q9UDY2 1190 aa11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 SERTAD1Q9UHV2 236 aa11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 XPO7Q9UIA9 1087 aaKnown RBP11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 TLR6Q9Y2C9 796 aa11.91□□□□□ -0.5
CCHCR1-219ENST00000505392 EME2A4GXA9 379 aaPredicted RBP11.9□□□□□ -0.5
CCHCR1-219ENST00000505392 BNIP3LO60238 219 aa11.9□□□□□ -0.5
CCHCR1-219ENST00000505392 SETSIPP0DME0 302 aa11.9□□□□□ -0.5
CCHCR1-219ENST00000505392 VDRP11473 427 aa11.9□□□□□ -0.5
CCHCR1-219ENST00000505392 HNRNPA2B1P22626 353 aaKnown RBP11.9□□□□□ -0.5
CCHCR1-219ENST00000505392 AKT2P31751 481 aa11.9□□□□□ -0.5
CCHCR1-219ENST00000505392 GTF2H1P32780 548 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms