RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, human

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD1L-208	ENST00000488864	TROVE2	P10155	538 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
CHD1L-208	ENST00000488864	NCAM1	P13591	858 aa		13.64	□□□□□ -0.23
CHD1L-208	ENST00000488864	SSTR1	P30872	391 aa		13.64	□□□□□ -0.23
CHD1L-208	ENST00000488864	CETN2	P41208	172 aa		13.64	□□□□□ -0.23
CHD1L-208	ENST00000488864	OCRL	Q01968	901 aa		13.64	□□□□□ -0.23
CHD1L-208	ENST00000488864	CCDC14	Q49A88	953 aa		13.64	□□□□□ -0.23
CHD1L-208	ENST00000488864	RNASEH2B	Q5TBB1	312 aa	Known RBP	13.64	□□□□□ -0.23
CHD1L-208	ENST00000488864	TPGS2	Q68CL5	300 aa		13.64	□□□□□ -0.23
CHD1L-208	ENST00000488864	TXNRD3NB	Q6F5E7	133 aa		13.64	□□□□□ -0.23
CHD1L-208	ENST00000488864	CEP128	Q6ZU80	1094 aa		13.64	□□□□□ -0.23
CHD1L-208	ENST00000488864	RFX8	Q6ZV50	586 aa		13.64	□□□□□ -0.23
CHD1L-208	ENST00000488864	EXD1	Q8NHP7	514 aa		13.64	□□□□□ -0.23
CHD1L-208	ENST00000488864	ZNF398	Q8TD17	642 aa		13.64	□□□□□ -0.23
CHD1L-208	ENST00000488864	ACSF2	Q96CM8	615 aa	Predicted RBP	13.64	□□□□□ -0.23
CHD1L-208	ENST00000488864	STK39	Q9UEW8	545 aa		13.64	□□□□□ -0.23
CHD1L-208	ENST00000488864	PCSK1N	Q9UHG2	260 aa		13.64	□□□□□ -0.23
CHD1L-208	ENST00000488864	RABGEF1	Q9UJ41	708 aa		13.64	□□□□□ -0.23
CHD1L-208	ENST00000488864	YIPF1	Q9Y548	306 aa		13.64	□□□□□ -0.23
CHD1L-208	ENST00000488864	WASF2	Q9Y6W5	498 aa		13.64	□□□□□ -0.23
CHD1L-208	ENST00000488864	HNRNPCL1	O60812	293 aa	Known RBP	13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	ZWINT	O95229	277 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	LTF	P02788	710 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	ADH1A	P07327	375 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	SERPINB3	P29508	390 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	SDC4	P31431	198 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	TUFM	P49411	452 aa	Known RBP	13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	ZNF143	P52747	638 aa	Predicted RBP	13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	POLE2	P56282	527 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	EFHC2	Q5JST6	749 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	BSPRY	Q5W0U4	402 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	PM20D1	Q6GTS8	502 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	ALLC	Q8N6M5	410 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	SLC7A14	Q8TBB6	771 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	POPDC2	Q9HBU9	364 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	TAS2R1	Q9NYW7	299 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	SLC24A2	Q9UI40	661 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	SCOC	Q9UIL1	159 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	SSX2IP	Q9Y2D8	614 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864		A0A1B0GVG6	124 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864		H3BNC9	293 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	LRCH4	O75427	683 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	RPS6KA3	P51812	740 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	GEMIN4	P57678	1058 aa	Known RBP	13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	RPL10A	P62906	217 aa	Known RBP	13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	TWF1	Q12792	350 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	TAF10	Q12962	218 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	MTM1	Q13496	603 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	PIGH	Q14442	188 aa	Predicted RBP	13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	SMTNL2	Q2TAL5	461 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	MFSD7	Q6UXD7	560 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	MZB1	Q8WU39	189 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	ZFAND2B	Q8WV99	257 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	FBXO32	Q969P5	355 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	EMILIN2	Q9BXX0	1053 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	MANSC1	Q9H8J5	431 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	C10orf88	Q9H8K7	445 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	NMUR1	Q9HB89	426 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	GMIP	Q9P107	970 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	IRAK3	Q9Y616	596 aa		13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864	SPTBN5	Q9NRC6	3674 aa	Known RBP	13.63	□□□□□ -0.23
CHD1L-208	ENST00000488864		A0A1W2PQH9	124 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	RTN3	O95197	1032 aa	Predicted RBP	13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	AMPD1	P23109	780 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	YWHAQ	P27348	245 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	MATK	P42679	507 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	ALDH1A3	P47895	512 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	ARFIP2	P53365	341 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	UBE3A	Q05086	875 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	AP1B1	Q10567	949 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	MORF4L2	Q15014	288 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	RAB30	Q15771	203 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	SEPT7	Q16181	437 aa	Known RBP	13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	MSS51	Q4VC12	460 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	KCNT1	Q5JUK3	1230 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	ZFYVE27	Q5T4F4	411 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	SCYL2	Q6P3W7	929 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	TTC7B	Q86TV6	843 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	CCNJL	Q8IV13	435 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	FNIP1	Q8TF40	1166 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	FAM172A	Q8WUF8	416 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	GATA6	Q92908	595 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	SKA1	Q96BD8	255 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	SLITRK1	Q96PX8	696 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	TBCB	Q99426	244 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	DDX50	Q9BQ39	737 aa	Known RBP	13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	CNPY3	Q9BT09	278 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	TMEM120A	Q9BXJ8	343 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	ZWILCH	Q9H900	591 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	OSER1	Q9NX31	292 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	INSL5	Q9Y5Q6	135 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	SLC38A8	A6NNN8	435 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	LPXN	O60711	386 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	BMP8B	P34820	402 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	ERF	P50548	548 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	YWHAG	P61981	247 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	CREM	Q03060	361 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	THOC5	Q13769	683 aa	Known RBP	13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	FNBP1L	Q5T0N5	605 aa		13.62	□□□□□ -0.23

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