RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 PATE3B3GLJ2 98 aa16.37■□□□□ 0.21
CTDSP1-209ENST00000488627 ATP9BO43861 1147 aa16.37■□□□□ 0.21
CTDSP1-209ENST00000488627 FOXD2O60548 495 aaPredicted RBP16.37■□□□□ 0.21
CTDSP1-209ENST00000488627 SNAP91O60641 907 aa16.37■□□□□ 0.21
CTDSP1-209ENST00000488627 LRIG2O94898 1065 aa16.37■□□□□ 0.21
CTDSP1-209ENST00000488627 SERPING1P05155 500 aa16.37■□□□□ 0.21
CTDSP1-209ENST00000488627 RHOCP08134 193 aa16.37■□□□□ 0.21
CTDSP1-209ENST00000488627 VAV1P15498 845 aa16.37■□□□□ 0.21
CTDSP1-209ENST00000488627 OXTRP30559 389 aa16.37■□□□□ 0.21
CTDSP1-209ENST00000488627 HNRNPH3P31942 346 aaKnown RBP16.37■□□□□ 0.21
CTDSP1-209ENST00000488627 CASP14P31944 242 aa16.37■□□□□ 0.21
CTDSP1-209ENST00000488627 ZNF33AQ06730 810 aa16.37■□□□□ 0.21
CTDSP1-209ENST00000488627 ZNF252P-AS1Q0IIN9 211 aa16.37■□□□□ 0.21
CTDSP1-209ENST00000488627 RSPO4Q2I0M5 234 aaPredicted RBP16.37■□□□□ 0.21
CTDSP1-209ENST00000488627 PEAR1Q5VY43 1037 aaPredicted RBP16.37■□□□□ 0.21
CTDSP1-209ENST00000488627 LYSMD4Q5XG99 296 aa16.37■□□□□ 0.21
CTDSP1-209ENST00000488627 DCUN1D2Q6PH85 259 aa16.37■□□□□ 0.21
CTDSP1-209ENST00000488627 SLFN11Q7Z7L1 901 aa16.37■□□□□ 0.21
CTDSP1-209ENST00000488627 CACUL1Q86Y37 369 aa16.37■□□□□ 0.21
CTDSP1-209ENST00000488627 SYT12Q8IV01 421 aa16.37■□□□□ 0.21
CTDSP1-209ENST00000488627 PIGKQ92643 395 aa16.37■□□□□ 0.21
CTDSP1-209ENST00000488627 TRIM7Q9C029 511 aa16.37■□□□□ 0.21
CTDSP1-209ENST00000488627 VPS28Q9UK41 221 aa16.37■□□□□ 0.21
CTDSP1-209ENST00000488627 PILRBQ9UKJ0 227 aa16.37■□□□□ 0.21
CTDSP1-209ENST00000488627 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.37■□□□□ 0.215e-7■■■□□ 16
CTDSP1-209ENST00000488627 SPAG17Q6Q759 2223 aa16.37■□□□□ 0.21
CTDSP1-209ENST00000488627 ILVBLA1L0T0 632 aa16.36■□□□□ 0.21
CTDSP1-209ENST00000488627 ANKRD62A6NC57 917 aa16.36■□□□□ 0.21
CTDSP1-209ENST00000488627 MT-CO1P00395 513 aa16.36■□□□□ 0.21
CTDSP1-209ENST00000488627 ACADMP11310 421 aa16.36■□□□□ 0.21
CTDSP1-209ENST00000488627 OR1E1P30953 314 aa16.36■□□□□ 0.21
CTDSP1-209ENST00000488627 ID4P47928 161 aa16.36■□□□□ 0.21
CTDSP1-209ENST00000488627 TDRD12Q587J7 1177 aaKnown RBP16.36■□□□□ 0.21
CTDSP1-209ENST00000488627 C6orf118Q5T5N4 469 aa16.36■□□□□ 0.21
CTDSP1-209ENST00000488627 ZNF776Q68DI1 518 aaPredicted RBP16.36■□□□□ 0.21
CTDSP1-209ENST00000488627 ZNF783Q6ZMS7 281 aa16.36■□□□□ 0.21
CTDSP1-209ENST00000488627 TMC6Q7Z403 805 aa16.36■□□□□ 0.21
CTDSP1-209ENST00000488627 PYROXD2Q8N2H3 581 aa16.36■□□□□ 0.21
CTDSP1-209ENST00000488627 GPR174Q9BXC1 333 aa16.36■□□□□ 0.21
CTDSP1-209ENST00000488627 MUC3BQ9H195 1237 aa16.36■□□□□ 0.21
CTDSP1-209ENST00000488627 RETREG1Q9H6L5 497 aa16.36■□□□□ 0.21
CTDSP1-209ENST00000488627 NDFIP2Q9NV92 336 aa16.36■□□□□ 0.21
CTDSP1-209ENST00000488627 ARHGAP20Q9P2F6 1191 aa16.36■□□□□ 0.21
CTDSP1-209ENST00000488627 CNOT8Q9UFF9 292 aaKnown RBP16.36■□□□□ 0.21
CTDSP1-209ENST00000488627 VPS51Q9UID3 782 aa16.36■□□□□ 0.21
CTDSP1-209ENST00000488627 FZD10Q9ULW2 581 aa16.36■□□□□ 0.21
CTDSP1-209ENST00000488627 NENFQ9UMX5 172 aa16.36■□□□□ 0.21
CTDSP1-209ENST00000488627 HS3ST2Q9Y278 367 aa16.36■□□□□ 0.21
CTDSP1-209ENST00000488627 CKAP5Q14008 2032 aa16.36■□□□□ 0.21
CTDSP1-209ENST00000488627 A0A087X0T9 212 aa16.35■□□□□ 0.21
CTDSP1-209ENST00000488627 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.35■□□□□ 0.21
CTDSP1-209ENST00000488627 CBFA2T2O43439 604 aa16.35■□□□□ 0.21
CTDSP1-209ENST00000488627 NDUFS2O75306 463 aa16.35■□□□□ 0.21
CTDSP1-209ENST00000488627 ZMPSTE24O75844 475 aa16.35■□□□□ 0.21
CTDSP1-209ENST00000488627 TPM3P06753 285 aa16.35■□□□□ 0.21
CTDSP1-209ENST00000488627 FAM228BP0C875 321 aa16.35■□□□□ 0.21
CTDSP1-209ENST00000488627 RHOQP17081 205 aa16.35■□□□□ 0.21
CTDSP1-209ENST00000488627 GLDCP23378 1020 aa16.35■□□□□ 0.21
CTDSP1-209ENST00000488627 L1CAMP32004 1257 aa16.35■□□□□ 0.21
CTDSP1-209ENST00000488627 NNMTP40261 264 aa16.35■□□□□ 0.21
CTDSP1-209ENST00000488627 IRX4P78413 519 aa16.35■□□□□ 0.21
CTDSP1-209ENST00000488627 SEMA3BQ13214 749 aa16.35■□□□□ 0.21
CTDSP1-209ENST00000488627 DLG2Q15700 870 aa16.35■□□□□ 0.21
CTDSP1-209ENST00000488627 SPECC1LQ69YQ0 1117 aa16.35■□□□□ 0.21
CTDSP1-209ENST00000488627 SCYL2Q6P3W7 929 aa16.35■□□□□ 0.21
CTDSP1-209ENST00000488627 VSTM4Q8IW00 320 aa16.35■□□□□ 0.21
CTDSP1-209ENST00000488627 STK40Q8N2I9 435 aa16.35■□□□□ 0.21
CTDSP1-209ENST00000488627 SH2D3CQ8N5H7 860 aa16.35■□□□□ 0.21
CTDSP1-209ENST00000488627 DCAF4L2Q8NA75 395 aa16.35■□□□□ 0.21
CTDSP1-209ENST00000488627 CADM4Q8NFZ8 388 aa16.35■□□□□ 0.21
CTDSP1-209ENST00000488627 OR7D4Q8NG98 312 aa16.35■□□□□ 0.21
CTDSP1-209ENST00000488627 FNIP1Q8TF40 1166 aa16.35■□□□□ 0.21
CTDSP1-209ENST00000488627 HSPA12BQ96MM6 686 aa16.35■□□□□ 0.21
CTDSP1-209ENST00000488627 C2orf49Q9BVC5 232 aaPredicted RBP16.35■□□□□ 0.21
CTDSP1-209ENST00000488627 TMEM248Q9NWD8 314 aa16.35■□□□□ 0.21
CTDSP1-209ENST00000488627 EVLQ9UI08 416 aaPredicted RBP16.35■□□□□ 0.21
CTDSP1-209ENST00000488627 SPTBN4Q9H254 2564 aa16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 METTL12A8MUP2 240 aa16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 K7ERQ8 282 aa16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 MYBL1P10243 752 aa16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 SRCP12931 536 aa16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 PSMA2P25787 234 aa16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 ACSL1P33121 698 aa16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 HOXD12P35452 270 aa16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 KRT83P78385 493 aa16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 GNA12Q03113 381 aa16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 ELAVL3Q14576 367 aaKnown RBP16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 PUM1Q14671 1186 aaKnown RBP eCLIP16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 CST6Q15828 149 aa16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 RWDD4Q6NW29 188 aaKnown RBP16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 CYP4V2Q6ZWL3 525 aaPredicted RBP16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 FAM124AQ86V42 546 aa16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 MMAAQ8IVH4 418 aaKnown RBP16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 DRC7Q8IY82 874 aa16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 C12orf50Q8NA57 414 aaPredicted RBP16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 NETO1Q8TDF5 533 aa16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 DNASE2BQ8WZ79 361 aa16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 FOXJ1Q92949 421 aa16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 ZNF653Q96CK0 615 aa16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 TBC1D31Q96DN5 1066 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms