RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 M0QYT0 321 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 ATP9BO43861 1147 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 DFNA5O60443 496 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 DAB1O75553 588 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 TBC1D3HP0C7X1 549 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 TFE3P19532 575 aaPredicted RBP12.55□□□□□ -0.4
VPS16-208ENST00000487461 CD38P28907 300 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 NOS2P35228 1153 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 GGCXP38435 758 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 PPP2CBP62714 309 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 PPP2CAP67775 309 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 ZNF177Q13360 481 aaPredicted RBP12.55□□□□□ -0.4
VPS16-208ENST00000487461 DLG2Q15700 870 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 TPD52L1Q16890 204 aaPredicted RBP12.55□□□□□ -0.4
VPS16-208ENST00000487461 C5orf22Q49AR2 442 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 ACCSLQ4AC99 568 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 OTUD1Q5VV17 481 aaPredicted RBP12.55□□□□□ -0.4
VPS16-208ENST00000487461 TBC1D3GQ6DHY5 549 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 SMYD5Q6GMV2 418 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 TBC1D3CQ6IPX1 549 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 LRSAM1Q6UWE0 723 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 SLC26A9Q7LBE3 791 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 GATAD2AQ86YP4 633 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 FAM71AQ8IYT1 594 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 TBC1D3Q8IZP1 549 aaPredicted RBP12.55□□□□□ -0.4
VPS16-208ENST00000487461 ZNF397Q8NF99 534 aaPredicted RBP12.55□□□□□ -0.4
VPS16-208ENST00000487461 FAM131CQ96AQ9 280 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 SKA1Q96BD8 255 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 NOX5Q96PH1 765 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 SPAG5Q96R06 1193 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 PPP1R9BQ96SB3 815 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 ELF4Q99607 663 aaPredicted RBP12.55□□□□□ -0.4
VPS16-208ENST00000487461 SIK2Q9H0K1 926 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 CCDC86Q9H6F5 360 aaKnown RBP12.55□□□□□ -0.4
VPS16-208ENST00000487461 ANLNQ9NQW6 1124 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 ARHGAP20Q9P2F6 1191 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 SNX10Q9Y5X0 201 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 GOLGA4Q13439 2230 aaKnown RBP12.55□□□□□ -0.4
VPS16-208ENST00000487461 ZFYVE26Q68DK2 2539 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 TMEM131Q92545 1883 aa12.55□□□□□ -0.4
VPS16-208ENST00000487461 WDFY3Q8IZQ1 3526 aa12.54□□□□□ -0.4
VPS16-208ENST00000487461 I6L893 689 aaPredicted RBP12.54□□□□□ -0.4
VPS16-208ENST00000487461 TLR4O00206 839 aa12.54□□□□□ -0.4
VPS16-208ENST00000487461 RTN2O75298 545 aa12.54□□□□□ -0.4
VPS16-208ENST00000487461 CLDN11O75508 207 aa12.54□□□□□ -0.4
VPS16-208ENST00000487461 CNTN5O94779 1100 aa12.54□□□□□ -0.4
VPS16-208ENST00000487461 ADCY5O95622 1261 aa12.54□□□□□ -0.4
VPS16-208ENST00000487461 CXCR3P49682 368 aa12.54□□□□□ -0.4
VPS16-208ENST00000487461 SNX16P57768 344 aa12.54□□□□□ -0.4
VPS16-208ENST00000487461 RNASE9P60153 205 aaKnown RBP12.54□□□□□ -0.4
VPS16-208ENST00000487461 KCNMA1Q12791 1236 aa12.54□□□□□ -0.4
VPS16-208ENST00000487461 MTA1Q13330 715 aa12.54□□□□□ -0.4
VPS16-208ENST00000487461 MAN2A1Q16706 1144 aa12.54□□□□□ -0.4
VPS16-208ENST00000487461 VWA3BQ502W6 1294 aa12.54□□□□□ -0.4
VPS16-208ENST00000487461 CCDC157Q569K6 752 aa12.54□□□□□ -0.4
VPS16-208ENST00000487461 MIIPQ5JXC2 388 aa12.54□□□□□ -0.4
VPS16-208ENST00000487461 MDM1Q8TC05 714 aa12.54□□□□□ -0.4
VPS16-208ENST00000487461 OR8D1Q8WZ84 308 aa12.54□□□□□ -0.4
VPS16-208ENST00000487461 SERAC1Q96JX3 654 aa12.54□□□□□ -0.4
VPS16-208ENST00000487461 NPY6RQ99463 290 aa12.54□□□□□ -0.4
VPS16-208ENST00000487461 NDST4Q9H3R1 872 aa12.54□□□□□ -0.4
VPS16-208ENST00000487461 WDCPQ9H6R7 721 aa12.54□□□□□ -0.4
VPS16-208ENST00000487461 SYNCQ9H7C4 482 aa12.54□□□□□ -0.4
VPS16-208ENST00000487461 PIGVQ9NUD9 493 aa12.54□□□□□ -0.4
VPS16-208ENST00000487461 ARHGEF38Q9NXL2 777 aa12.54□□□□□ -0.4
VPS16-208ENST00000487461 SLC25A13Q9UJS0 675 aa12.54□□□□□ -0.4
VPS16-208ENST00000487461 PPM1HQ9ULR3 514 aa12.54□□□□□ -0.4
VPS16-208ENST00000487461 LHX6Q9UPM6 363 aa12.54□□□□□ -0.4
VPS16-208ENST00000487461 TBC1D30Q9Y2I9 924 aa12.54□□□□□ -0.4
VPS16-208ENST00000487461 KNTC1P50748 2209 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 PTPRBP23467 1997 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 FAM170AA1A519 330 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 FAM149AA5PLN7 773 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 CBX4O00257 560 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 MCF2LO15068 1137 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 LATO43561 262 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 MT-CO1P00395 513 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 HOXB3P14651 431 aaPredicted RBP12.53□□□□□ -0.4
VPS16-208ENST00000487461 CDH5P33151 784 aaPredicted RBP12.53□□□□□ -0.4
VPS16-208ENST00000487461 GABRB2P47870 512 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 CDH4P55283 916 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 BPIFB4P59827 614 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 CNTN1Q12860 1018 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 DRAP1Q14919 205 aaPredicted RBP12.53□□□□□ -0.4
VPS16-208ENST00000487461 POM121L1PQ3SYA9 428 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 ALFQ53S48 1182 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 HSP90AA4PQ58FG1 418 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 Q6ZVU0 165 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 DSG4Q86SJ6 1040 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 PRPF39Q86UA1 669 aaKnown RBP12.53□□□□□ -0.4
VPS16-208ENST00000487461 ZDHHC17Q8IUH5 632 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 ZNF683Q8IZ20 524 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 SH2D3CQ8N5H7 860 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 PIP4K2CQ8TBX8 421 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 SAP25Q8TEE9 199 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 NT5C3BQ969T7 300 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 PSMB7Q99436 277 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 TUBGCP2Q9BSJ2 902 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 TKTL2Q9H0I9 626 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 KDM4CQ9H3R0 1056 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms