RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 HRO43593 1189 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 SNAP91O60641 907 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 PROSCO94903 275 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 NDUFA10O95299 355 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 LCA5LO95447 670 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 ASLP04424 464 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 RHOQP17081 205 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 ACVRL1P37023 503 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 NRLP54845 237 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 AIF1P55008 147 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 OXCT1P55809 520 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 TPI1P60174 286 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 ST8SIA6P61647 398 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 ECT2LQ008S8 904 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 NRG1Q02297 640 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-222ENST00000478095 SEMA3BQ13214 749 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 SLC12A1Q13621 1099 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 ENPP2Q13822 863 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 MESDQ14696 234 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 STARD3Q14849 445 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 ACAP1Q15027 740 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 SPA17Q15506 151 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 PPP6R3Q5H9R7 873 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-222ENST00000478095 ERMARDQ5T6L9 678 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 SETD3Q86TU7 594 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-222ENST00000478095 LONP2Q86WA8 852 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 TMEM139Q8IV31 216 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 PGBD3Q8N328 593 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 CAMKK1Q8N5S9 505 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 NIPA2Q8N8Q9 360 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 ZBTB44Q8NCP5 570 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 ACRBPQ8NEB7 543 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 ATRIPQ8WXE1 791 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 RFFLQ8WZ73 363 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 NELL1Q92832 810 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 ALG14Q96F25 216 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 MYO19Q96H55 970 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 PSMB7Q99436 277 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 FEM1AQ9BSK4 669 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 SPON2Q9BUD6 331 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 FAM126AQ9BYI3 521 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-222ENST00000478095 IRF2BPLQ9H1B7 796 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 TMEM245Q9H330 911 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.54□□□□□ -0.72
HDAC6-222ENST00000478095 SLCO3A1Q9UIG8 710 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 ERVW-1Q9UQF0 538 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 INVSQ9Y283 1065 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 PCDHGA2Q9Y5H1 932 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 PCDHA13Q9Y5I0 950 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 OR51B4Q9Y5P0 310 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 MIA3Q5JRA6 1907 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 KIAA1549LQ6ZVL6 1849 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 TTC34A8MYJ7 566 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 EIF3CLB5ME19 914 aaKnown RBP10.53□□□□□ -0.72
HDAC6-222ENST00000478095 CBX4O00257 560 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 EEF2KO00418 725 aaKnown RBP10.53□□□□□ -0.72
HDAC6-222ENST00000478095 NPC1O15118 1278 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 SYNCRIPO60506 623 aaKnown RBP10.53□□□□□ -0.72
HDAC6-222ENST00000478095 ALDH1A2O94788 518 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 RARAP10276 462 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 GOT1P17174 413 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 GABRG2P18507 467 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 NDUFV2P19404 249 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 GLDCP23378 1020 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 HOXA6P31267 233 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 MAPKAPK2P49137 400 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 PLK1P53350 603 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 SLC25A11Q02978 314 aaKnown RBP10.53□□□□□ -0.72
HDAC6-222ENST00000478095 GNA12Q03113 381 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 LPAL2Q16609 132 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 IL31Q6EBC2 164 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 ZC3H14Q6PJT7 736 aaKnown RBP10.53□□□□□ -0.72
HDAC6-222ENST00000478095 KIAA1324Q6UXG2 1013 aaKnown RBP10.53□□□□□ -0.72
HDAC6-222ENST00000478095 LINGO4Q6UY18 593 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 WDR5BQ86VZ2 330 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 RASSF3Q86WH2 238 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 RHOT2Q8IXI1 618 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 RTL3Q8N8U3 475 aaKnown RBP10.53□□□□□ -0.72
HDAC6-222ENST00000478095 DCAF4L2Q8NA75 395 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 RLN3Q8WXF3 142 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 EIF3CQ99613 913 aaKnown RBP10.53□□□□□ -0.72
HDAC6-222ENST00000478095 DESI2Q9BSY9 194 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 CD248Q9HCU0 757 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 ATP13A1Q9HD20 1204 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 KLHL11Q9NVR0 708 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 TMEM248Q9NWD8 314 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 VPS51Q9UID3 782 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 INTUQ9ULD6 942 aa10.53□□□□□ -0.72
HDAC6-222ENST00000478095 REXO2Q9Y3B8 237 aaKnown RBP10.53□□□□□ -0.72
HDAC6-222ENST00000478095 EPN1Q9Y6I3 576 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-222ENST00000478095 ILVBLA1L0T0 632 aa10.52□□□□□ -0.73
HDAC6-222ENST00000478095 RCCD1A6NED2 376 aa10.52□□□□□ -0.73
HDAC6-222ENST00000478095 DCLK1O15075 740 aa10.52□□□□□ -0.73
HDAC6-222ENST00000478095 DAPK3O43293 454 aa10.52□□□□□ -0.73
HDAC6-222ENST00000478095 RAMP2O60895 175 aa10.52□□□□□ -0.73
HDAC6-222ENST00000478095 LILRB5O75023 590 aa10.52□□□□□ -0.73
HDAC6-222ENST00000478095 IPO7O95373 1038 aaKnown RBP10.52□□□□□ -0.73
HDAC6-222ENST00000478095 MT-CO1P00395 513 aa10.52□□□□□ -0.73
HDAC6-222ENST00000478095 SRPRAP08240 638 aaKnown RBP10.52□□□□□ -0.73
HDAC6-222ENST00000478095 VAV1P15498 845 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms