RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 PARD6AQ9NPB6 346 aa14.59□□□□□ -0.07
VAMP4-203ENST00000474047 VPS45Q9NRW7 570 aa14.59□□□□□ -0.07
VAMP4-203ENST00000474047 NCKAP1Q9Y2A7 1128 aa14.59□□□□□ -0.07
VAMP4-203ENST00000474047 CKAP5Q14008 2032 aa14.59□□□□□ -0.07
VAMP4-203ENST00000474047 A0A087X0T9 212 aa14.58□□□□□ -0.07
VAMP4-203ENST00000474047 ILVBLA1L0T0 632 aa14.58□□□□□ -0.07
VAMP4-203ENST00000474047 BCLAF3A2AJT9 711 aaKnown RBP14.58□□□□□ -0.07
VAMP4-203ENST00000474047 CREB3O43889 395 aa14.58□□□□□ -0.07
VAMP4-203ENST00000474047 BNIP3LO60238 219 aa14.58□□□□□ -0.07
VAMP4-203ENST00000474047 LRIG2O94898 1065 aa14.58□□□□□ -0.07
VAMP4-203ENST00000474047 FAM228BP0C875 321 aa14.58□□□□□ -0.07
VAMP4-203ENST00000474047 OGDHQ02218 1023 aa14.58□□□□□ -0.07
VAMP4-203ENST00000474047 NRG1Q02297 640 aaPredicted RBP14.58□□□□□ -0.07
VAMP4-203ENST00000474047 ZBTB16Q05516 673 aa14.58□□□□□ -0.07
VAMP4-203ENST00000474047 AASDHQ4L235 1098 aaPredicted RBP14.58□□□□□ -0.07
VAMP4-203ENST00000474047 IL31Q6EBC2 164 aa14.58□□□□□ -0.07
VAMP4-203ENST00000474047 ZNF783Q6ZMS7 281 aa14.58□□□□□ -0.07
VAMP4-203ENST00000474047 PRR23CQ6ZRP0 262 aa14.58□□□□□ -0.07
VAMP4-203ENST00000474047 ATP11CQ8NB49 1132 aa14.58□□□□□ -0.07
VAMP4-203ENST00000474047 ALG14Q96F25 216 aa14.58□□□□□ -0.07
VAMP4-203ENST00000474047 MYO19Q96H55 970 aa14.58□□□□□ -0.07
VAMP4-203ENST00000474047 EPAS1Q99814 870 aa14.58□□□□□ -0.07
VAMP4-203ENST00000474047 RETREG1Q9H6L5 497 aa14.58□□□□□ -0.07
VAMP4-203ENST00000474047 ATP13A1Q9HD20 1204 aa14.58□□□□□ -0.07
VAMP4-203ENST00000474047 CD93Q9NPY3 652 aa14.58□□□□□ -0.07
VAMP4-203ENST00000474047 USP36Q9P275 1121 aaKnown RBP14.58□□□□□ -0.07
VAMP4-203ENST00000474047 FZD10Q9ULW2 581 aa14.58□□□□□ -0.07
VAMP4-203ENST00000474047 A0A0D9SEW6 157 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 PRR5-ARHGAP8B1AHC4 643 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 FAM72CH0Y354 149 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 CBX4O00257 560 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 PRPSAP2O60256 369 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 ZNF806P0C7X5 589 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 RHOQP17081 205 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 EPHB2P29323 1055 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 L1CAMP32004 1257 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 ETFBP38117 255 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 DPP6P42658 865 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 PTGER3P43115 390 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 RPS14P62263 151 aaKnown RBP14.58□□□□□ -0.08
VAMP4-203ENST00000474047 ARHGAP8P85298 464 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 ZNF33AQ06730 810 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 SCAPQ12770 1279 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 ARID5BQ14865 1188 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 SYCP2LQ5T4T6 812 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 C9orf64Q5T6V5 341 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 FAM72AQ5TYM5 149 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 FAM72DQ6L9T8 149 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 DSG4Q86SJ6 1040 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 FAM72BQ86X60 149 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 ZNF354CQ86Y25 554 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 RGL4Q8IZJ4 473 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 NCAPGQ9BPX3 1015 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 GPR174Q9BXC1 333 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 MAGEB5Q9BZ81 275 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 RSPH9Q9H1X1 276 aaPredicted RBP14.58□□□□□ -0.08
VAMP4-203ENST00000474047 ARHGAP20Q9P2F6 1191 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 PCSK1NQ9UHG2 260 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 DNAI1Q9UI46 699 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 HPCAL4Q9UM19 191 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 SCML1Q9UN30 329 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 FARP1Q9Y4F1 1045 aaPredicted RBP14.58□□□□□ -0.08
VAMP4-203ENST00000474047 OR51B4Q9Y5P0 310 aa14.58□□□□□ -0.08
VAMP4-203ENST00000474047 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.58□□□□□ -0.08
VAMP4-203ENST00000474047 MEI4A8MW99 385 aa14.57□□□□□ -0.08
VAMP4-203ENST00000474047 AKR1B10O60218 316 aa14.57□□□□□ -0.08
VAMP4-203ENST00000474047 SNAP91O60641 907 aa14.57□□□□□ -0.08
VAMP4-203ENST00000474047 HNRNPH3P31942 346 aaKnown RBP14.57□□□□□ -0.08
VAMP4-203ENST00000474047 MAPKAPK2P49137 400 aa14.57□□□□□ -0.08
VAMP4-203ENST00000474047 ADKP55263 362 aaKnown RBP14.57□□□□□ -0.08
VAMP4-203ENST00000474047 GNA12Q03113 381 aa14.57□□□□□ -0.08
VAMP4-203ENST00000474047 SF3A2Q15428 464 aaKnown RBP14.57□□□□□ -0.08
VAMP4-203ENST00000474047 DLG2Q15700 870 aa14.57□□□□□ -0.08
VAMP4-203ENST00000474047 RETSATQ6NUM9 610 aa14.57□□□□□ -0.08
VAMP4-203ENST00000474047 MMAAQ8IVH4 418 aaKnown RBP14.57□□□□□ -0.08
VAMP4-203ENST00000474047 PYROXD2Q8N2H3 581 aa14.57□□□□□ -0.08
VAMP4-203ENST00000474047 STK40Q8N2I9 435 aa14.57□□□□□ -0.08
VAMP4-203ENST00000474047 DCAF4L2Q8NA75 395 aa14.57□□□□□ -0.08
VAMP4-203ENST00000474047 OR7D4Q8NG98 312 aa14.57□□□□□ -0.08
VAMP4-203ENST00000474047 FNIP1Q8TF40 1166 aa14.57□□□□□ -0.08
VAMP4-203ENST00000474047 FOXJ1Q92949 421 aa14.57□□□□□ -0.08
VAMP4-203ENST00000474047 CCDC114Q96M63 670 aa14.57□□□□□ -0.08
VAMP4-203ENST00000474047 HSPA12BQ96MM6 686 aa14.57□□□□□ -0.08
VAMP4-203ENST00000474047 DNAJC7Q99615 494 aa14.57□□□□□ -0.08
VAMP4-203ENST00000474047 OMDQ99983 421 aa14.57□□□□□ -0.08
VAMP4-203ENST00000474047 THAP2Q9H0W7 228 aa14.57□□□□□ -0.08
VAMP4-203ENST00000474047 SMOC1Q9H4F8 434 aa14.57□□□□□ -0.08
VAMP4-203ENST00000474047 CATSPERBQ9H7T0 1116 aa14.57□□□□□ -0.08
VAMP4-203ENST00000474047 WSB2Q9NYS7 404 aaPredicted RBP14.57□□□□□ -0.08
VAMP4-203ENST00000474047 VPS51Q9UID3 782 aa14.57□□□□□ -0.08
VAMP4-203ENST00000474047 PLXND1Q9Y4D7 1925 aa14.56□□□□□ -0.08
VAMP4-203ENST00000474047 KHNYNO15037 678 aaKnown RBP14.56□□□□□ -0.08
VAMP4-203ENST00000474047 IL1BP01584 269 aa14.56□□□□□ -0.08
VAMP4-203ENST00000474047 SDHBP21912 280 aa14.56□□□□□ -0.08
VAMP4-203ENST00000474047 TGM1P22735 817 aa14.56□□□□□ -0.08
VAMP4-203ENST00000474047 ELAVL3Q14576 367 aaKnown RBP14.56□□□□□ -0.08
VAMP4-203ENST00000474047 WDR45BQ5MNZ6 344 aa14.56□□□□□ -0.08
VAMP4-203ENST00000474047 MANEALQ5VSG8 457 aa14.56□□□□□ -0.08
VAMP4-203ENST00000474047 SARM1Q6SZW1 724 aa14.56□□□□□ -0.08
VAMP4-203ENST00000474047 SYT12Q8IV01 421 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms