RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 ARL14EPQ8N8R7 260 aaPredicted RBP3.9□□□□□ -1.79
LRCH3-213ENST00000471667 MAB21L3Q8N8X9 362 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 IGDCC4Q8TDY8 1250 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 BTN2A2Q8WVV5 523 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 PSMG2Q969U7 264 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 KIF1BPQ96EK5 621 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 CDK5RAP1Q96SZ6 601 aaKnown RBP3.9□□□□□ -1.79
LRCH3-213ENST00000471667 MXRA8Q9BRK3 442 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 FUCA2Q9BTY2 467 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 RPF1Q9H9Y2 349 aaKnown RBP3.9□□□□□ -1.79
LRCH3-213ENST00000471667 GDF3Q9NR23 364 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 TBC1D22BQ9NU19 505 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 MIOSQ9NXC5 875 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 DTLQ9NZJ0 730 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 FBXL7Q9UJT9 491 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 ANAPC4Q9UJX5 808 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 CROTQ9UKG9 612 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 NUB1Q9Y5A7 615 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 PCDHB4Q9Y5E5 795 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 GON4LQ3T8J9 2241 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 MED13LQ71F56 2210 aa3.9□□□□□ -1.79
LRCH3-213ENST00000471667 PDZD2O15018 2839 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 MYH7P12883 1935 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 DOCK6Q96HP0 2047 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 HIVEP3Q5T1R4 2406 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 CDRT15L2A8MXV6 281 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 PRSS44E7EML9 344 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 TMX2-CTNND1H3BSU7 103 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 CBX4O00257 560 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 CYR61O00622 381 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 KCNK3O14649 394 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 SLC9A3R1O14745 358 aaPredicted RBP3.89□□□□□ -1.79
LRCH3-213ENST00000471667 TBX1O43435 398 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 OPA1O60313 960 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 CKMP06732 381 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 GP1BAP07359 652 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 SNRPB2P08579 225 aaKnown RBP3.89□□□□□ -1.79
LRCH3-213ENST00000471667 SRGAP2CP0DJJ0 459 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 VAMP1P23763 118 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 AKAP5P24588 427 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 ITGA3P26006 1051 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 HOXC12P31275 282 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 ACVRL1P37023 503 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 TNFSF9P41273 254 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 TUFMP49411 452 aaKnown RBP3.89□□□□□ -1.79
LRCH3-213ENST00000471667 BCAT1P54687 386 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 RNASE9P60153 205 aaKnown RBP3.89□□□□□ -1.79
LRCH3-213ENST00000471667 PPP2CBP62714 309 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 RPL10AP62906 217 aaKnown RBP3.89□□□□□ -1.79
LRCH3-213ENST00000471667 PPP2CAP67775 309 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 BNC1Q01954 994 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 PRKCEQ02156 737 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 EIF3IQ13347 325 aaKnown RBP3.89□□□□□ -1.79
LRCH3-213ENST00000471667 DRP2Q13474 957 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 TESK1Q15569 626 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 ISXQ2M1V0 245 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 CEP55Q53EZ4 464 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 TMCO4Q5TGY1 634 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 STEAP3Q658P3 488 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 NAIF1Q69YI7 327 aaPredicted RBP3.89□□□□□ -1.79
LRCH3-213ENST00000471667 USP17L6PQ6QN14 398 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 TEPPQ6URK8 271 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 ARHGEF18Q6ZSZ5 1173 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 DSG4Q86SJ6 1040 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 NT5DC4Q86YG4 428 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 NOSTRINQ8IVI9 506 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 KBTBD2Q8IY47 623 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 EFCAB13Q8IY85 973 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 KBTBD3Q8NAB2 608 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 RCBTB1Q8NDN9 531 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 MAPK15Q8TD08 544 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 SAP25Q8TEE9 199 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 IPO4Q8TEX9 1081 aaKnown RBP3.89□□□□□ -1.79
LRCH3-213ENST00000471667 SCFD1Q8WVM8 642 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 PSPC1Q8WXF1 523 aaKnown RBP3.89□□□□□ -1.79
LRCH3-213ENST00000471667 NDRG1Q92597 394 aaKnown RBP3.89□□□□□ -1.79
LRCH3-213ENST00000471667 PRCCQ92733 491 aaPredicted RBP3.89□□□□□ -1.79
LRCH3-213ENST00000471667 USP13Q92995 863 aaPredicted RBP3.89□□□□□ -1.79
LRCH3-213ENST00000471667 ANAPC16Q96DE5 110 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 MTMR8Q96EF0 704 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 SEC16BQ96JE7 1060 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 PIGSQ96S52 555 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 UBAC1Q9BSL1 405 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 ZNF747Q9BV97 191 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 INTS2Q9H0H0 1204 aaKnown RBP3.89□□□□□ -1.79
LRCH3-213ENST00000471667 VPS11Q9H270 941 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 DEF6Q9H4E7 631 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 PSTPIP2Q9H939 334 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 USP29Q9HBJ7 922 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 AGO4Q9HCK5 861 aaKnown RBP3.89□□□□□ -1.79
LRCH3-213ENST00000471667 WSB2Q9NYS7 404 aaPredicted RBP3.89□□□□□ -1.79
LRCH3-213ENST00000471667 FBXL5Q9UKA1 691 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 EXOC6BQ9Y2D4 811 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 HES2Q9Y543 173 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 PCDHGA7Q9Y5G6 932 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 COL4A3BPQ9Y5P4 624 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 CABIN1Q9Y6J0 2220 aa3.89□□□□□ -1.79
LRCH3-213ENST00000471667 MED13Q9UHV7 2174 aa3.88□□□□□ -1.79
LRCH3-213ENST00000471667 CCDC187A0A096LP49 1063 aa3.88□□□□□ -1.79
LRCH3-213ENST00000471667 TRAV19A0A0A6YYK7 116 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms