RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 RGL1Q9NZL6 768 aa6.24□□□□□ -1.41
NCL-208ENST00000466274 DEC1Q9P2X7 70 aa6.24□□□□□ -1.41
NCL-208ENST00000466274 PLEKHB1Q9UF11 243 aaPredicted RBP6.24□□□□□ -1.41
NCL-208ENST00000466274 EIF2B4Q9UI10 523 aaKnown RBP6.24□□□□□ -1.41
NCL-208ENST00000466274 TNFSF13BQ9Y275 285 aa6.24□□□□□ -1.41
NCL-208ENST00000466274 MGAQ8IWI9 3026 aa6.24□□□□□ -1.41
NCL-208ENST00000466274 PCDH15Q96QU1 1955 aa6.24□□□□□ -1.41
NCL-208ENST00000466274 ANTXRLA6NF34 631 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 BTBD18B2RXH4 712 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 NOBOXO60393 691 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 USO1O60763 962 aaKnown RBP6.23□□□□□ -1.41
NCL-208ENST00000466274 GJB6O95452 261 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 MT-CO3P00414 261 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 EPHX1P07099 455 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 ACADMP11310 421 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 HMGA1P17096 107 aaKnown RBP6.23□□□□□ -1.41
NCL-208ENST00000466274 CKMT2P17540 419 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 LRPAP1P30533 357 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 AARSP49588 968 aaKnown RBP eCLIP6.23□□□□□ -1.417e-7■□□□□ 10.3
NCL-208ENST00000466274 RARRES1P49788 294 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 ZNF132P52740 706 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 RCAN1P53805 252 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 CLDN6P56747 220 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 OSTNP61366 133 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 GABREP78334 506 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 DNAJC3Q13217 504 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 E2F5Q15329 346 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 ZXDCQ2QGD7 858 aaPredicted RBP6.23□□□□□ -1.41
NCL-208ENST00000466274 ARL13BQ3SXY8 428 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 ZNF568Q3ZCX4 644 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 C10orf76Q5T2E6 689 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 USP53Q70EK8 1073 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 MAEAQ7L5Y9 396 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 FILIP1Q7Z7B0 1213 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 DDX42Q86XP3 938 aaKnown RBP eCLIP6.23□□□□□ -1.41
NCL-208ENST00000466274 CARFQ8N187 725 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 ARL14EPQ8N8R7 260 aaPredicted RBP6.23□□□□□ -1.41
NCL-208ENST00000466274 SCFD1Q8WVM8 642 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 SNX19Q92543 992 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 TSPAN17Q96FV3 270 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 TRMT2BQ96GJ1 504 aaKnown RBP6.23□□□□□ -1.41
NCL-208ENST00000466274 MRGPRX1Q96LB2 322 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 ZMAT2Q96NC0 199 aaKnown RBP6.23□□□□□ -1.41
NCL-208ENST00000466274 CYP2S1Q96SQ9 504 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 TCHPQ9BT92 498 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 ZCWPW1Q9H0M4 648 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 POLR1BQ9H9Y6 1135 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 ITM2CQ9NQX7 267 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 SH3GLB2Q9NR46 395 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 METTL5Q9NRN9 209 aaKnown RBP6.23□□□□□ -1.41
NCL-208ENST00000466274 USP36Q9P275 1121 aaKnown RBP6.23□□□□□ -1.41
NCL-208ENST00000466274 TBC1D14Q9P2M4 693 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 FBN2P35556 2912 aa6.23□□□□□ -1.41
NCL-208ENST00000466274 A0A1B0GTQ1 180 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 A0A1W2PQH9 124 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 K7ERI5 159 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 K7ESM1 405 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 LEFTY2O00292 366 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 PRPF3O43395 683 aaKnown RBP6.22□□□□□ -1.41
NCL-208ENST00000466274 EDIL3O43854 480 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 SYNCRIPO60506 623 aaKnown RBP6.22□□□□□ -1.41
NCL-208ENST00000466274 SLITRK3O94933 977 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 MCF2P10911 925 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 GCFC2P16383 781 aaKnown RBP6.22□□□□□ -1.41
NCL-208ENST00000466274 POU3F2P20265 443 aaPredicted RBP6.22□□□□□ -1.41
NCL-208ENST00000466274 CYP3A5P20815 502 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 WASP42768 502 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 ARRB1P49407 418 aaPredicted RBP6.22□□□□□ -1.41
NCL-208ENST00000466274 SEPHS1P49903 392 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 ATP2C1P98194 919 aaPredicted RBP6.22□□□□□ -1.41
NCL-208ENST00000466274 GRIN1Q05586 938 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 NCAPHQ15003 741 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 NFE2Q16621 373 aaPredicted RBP6.22□□□□□ -1.41
NCL-208ENST00000466274 KDM7AQ6ZMT4 941 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 SFTPA1Q8IWL2 248 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 TERB1Q8NA31 727 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 PRCCQ92733 491 aaPredicted RBP6.22□□□□□ -1.41
NCL-208ENST00000466274 OTUB2Q96DC9 234 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 MOCOSQ96EN8 888 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 PEX11GQ96HA9 241 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 VCPIP1Q96JH7 1222 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 DEPDC7Q96QD5 511 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 CCNL2Q96S94 520 aaPredicted RBP6.22□□□□□ -1.41
NCL-208ENST00000466274 GABRG3Q99928 467 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 MRPL4Q9BYD3 311 aaKnown RBP6.22□□□□□ -1.41
NCL-208ENST00000466274 ACE2Q9BYF1 805 aaPredicted RBP6.22□□□□□ -1.41
NCL-208ENST00000466274 LRRC2Q9BYS8 371 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 LNPKQ9C0E8 428 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 CCDC113Q9H0I3 377 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 SLC25A18Q9H1K4 315 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 PLEKHA5Q9HAU0 1116 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 ZDHHC4Q9NPG8 344 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 EHD2Q9NZN4 543 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 CGGBP1Q9UFW8 167 aaPredicted RBP6.22□□□□□ -1.41
NCL-208ENST00000466274 NAP1L2Q9ULW6 460 aaPredicted RBP6.22□□□□□ -1.41
NCL-208ENST00000466274 EFR3BQ9Y2G0 817 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 EML5Q05BV3 1969 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 RELNP78509 3460 aa6.22□□□□□ -1.41
NCL-208ENST00000466274 PDCD11Q14690 1871 aaKnown RBP6.22□□□□□ -1.41
NCL-208ENST00000466274 MYH9P35579 1960 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms