RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 NGRNQ9NPE2 291 aaKnown RBP6.32□□□□□ -1.4
VPS13D-202ENST00000460333 LGALS13Q9UHV8 139 aa6.32□□□□□ -1.4
VPS13D-202ENST00000460333 NOCTQ9UK39 431 aaKnown RBP6.32□□□□□ -1.4
VPS13D-202ENST00000460333 COQ6Q9Y2Z9 468 aa6.32□□□□□ -1.4
VPS13D-202ENST00000460333 SNAP91O60641 907 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 ARF4P18085 180 aaPredicted RBP6.31□□□□□ -1.4
VPS13D-202ENST00000460333 IGFBP4P22692 258 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 SERPINB5P36952 375 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 SLC1A6P48664 564 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 CRYBB1P53674 252 aaPredicted RBP6.31□□□□□ -1.4
VPS13D-202ENST00000460333 RAD23AP54725 363 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 ARPP19P56211 112 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 CLDN10P78369 228 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 WASHC5Q12768 1159 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 CSTF3Q12996 717 aaKnown RBP6.31□□□□□ -1.4
VPS13D-202ENST00000460333 TUBA3CQ13748 450 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 TCEAL1Q15170 157 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 SAMD4BQ5PRF9 694 aaKnown RBP6.31□□□□□ -1.4
VPS13D-202ENST00000460333 EEF1DP3Q658K8 133 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 ABRAXAS1Q6UWZ7 409 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 NCCRP1Q6ZVX7 275 aaPredicted RBP6.31□□□□□ -1.4
VPS13D-202ENST00000460333 CLNKQ7Z7G1 428 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 CDH24Q86UP0 819 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 FBXW8Q8N3Y1 598 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 TTC30BQ8N4P2 665 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 ENDOVQ8N8Q3 282 aaKnown RBP6.31□□□□□ -1.4
VPS13D-202ENST00000460333 SNX31Q8N9S9 440 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 SETD9Q8NE22 299 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 DNAJB3Q8WWF6 145 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 BDH2Q9BUT1 245 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 TASP1Q9H6P5 420 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 TCF7L2Q9NQB0 619 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 TAS2R14Q9NYV8 317 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 AJAP1Q9UKB5 411 aaPredicted RBP6.31□□□□□ -1.4
VPS13D-202ENST00000460333 MYH9P35579 1960 aaKnown RBP6.31□□□□□ -1.4
VPS13D-202ENST00000460333 TRDMT1O14717 391 aaKnown RBP6.31□□□□□ -1.4
VPS13D-202ENST00000460333 DUSP11O75319 330 aaKnown RBP6.31□□□□□ -1.4
VPS13D-202ENST00000460333 DGKIO75912 1065 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 CABYRO75952 493 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 SNAI1O95863 264 aaPredicted RBP6.31□□□□□ -1.4
VPS13D-202ENST00000460333 HMGCRP04035 888 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 ASLP04424 464 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 APRTP07741 180 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 ZNF23P17027 643 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 VCLP18206 1134 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 RPA3P35244 121 aaPredicted RBP6.31□□□□□ -1.4
VPS13D-202ENST00000460333 SCNN1BP51168 640 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 ITKQ08881 620 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 TBCELQ5QJ74 424 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 ARMC4Q5T2S8 1044 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 FAM102AQ5T9C2 384 aaPredicted RBP6.31□□□□□ -1.4
VPS13D-202ENST00000460333 DHFR2Q86XF0 187 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 RASAL3Q86YV0 1011 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 IFNLR1Q8IU57 520 aaPredicted RBP6.31□□□□□ -1.4
VPS13D-202ENST00000460333 ERI1Q8IV48 349 aaKnown RBP6.31□□□□□ -1.4
VPS13D-202ENST00000460333 YAF2Q8IY57 180 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 NUP93Q8N1F7 819 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 ZSWIM2Q8NEG5 633 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 PLEKHO2Q8TD55 490 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 ZCWPW1Q9H0M4 648 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 TPRKBQ9Y3C4 175 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 RAD51BO15315 384 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 B4GALT5O43286 388 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 LZTS3O60299 673 aaPredicted RBP6.31□□□□□ -1.4
VPS13D-202ENST00000460333 SNX2O60749 519 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 UPP2O95045 317 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 PYGMP11217 842 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 ADRA1DP25100 572 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 GRK4P32298 578 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 HPCAP84074 193 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 ILF2Q12905 390 aaKnown RBP6.31□□□□□ -1.4
VPS13D-202ENST00000460333 SLC12A1Q13621 1099 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 ACAP1Q15027 740 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 TFDP3Q5H9I0 405 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 TCHHL1Q5QJ38 904 aaPredicted RBP6.31□□□□□ -1.4
VPS13D-202ENST00000460333 FAM117BQ6P1L5 589 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 DDIASQ8IXT1 998 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 THEM5Q8N1Q8 247 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 PQLC1Q8N2U9 271 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 MCEEQ96PE7 176 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 SRPK1Q96SB4 655 aaKnown RBP6.31□□□□□ -1.4
VPS13D-202ENST00000460333 CHID1Q9BWS9 393 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 ADAM33Q9BZ11 813 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 PDZD7Q9H5P4 517 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 STOML2Q9UJZ1 356 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 TRPV2Q9Y5S1 764 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 EME2A4GXA9 379 aaPredicted RBP6.31□□□□□ -1.4
VPS13D-202ENST00000460333 TMEM191CA6NGB0 347 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 TIMM44O43615 452 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 PEX11AO75192 247 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 LINGO3P0C6S8 592 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 RBP3P10745 1247 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 DARSP14868 501 aaKnown RBP6.31□□□□□ -1.4
VPS13D-202ENST00000460333 NAA20P61599 178 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 CHRNB3Q05901 458 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 USP4Q13107 963 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 TRAF3Q13114 568 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 PRKAA1Q13131 559 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 KLHL12Q53G59 568 aa6.31□□□□□ -1.4
VPS13D-202ENST00000460333 DEPDC1Q5TB30 811 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms