RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 FNBP1LQ5T0N5 605 aa11.52□□□□□ -0.56
PTCH2-203ENST00000447098 ACAD11Q709F0 780 aa11.52□□□□□ -0.56
PTCH2-203ENST00000447098 SLC26A11Q86WA9 606 aa11.52□□□□□ -0.56
PTCH2-203ENST00000447098 KBTBD2Q8IY47 623 aa11.52□□□□□ -0.56
PTCH2-203ENST00000447098 CLEC4CQ8WTT0 213 aa11.52□□□□□ -0.56
PTCH2-203ENST00000447098 CATSPERBQ9H7T0 1116 aa11.52□□□□□ -0.56
PTCH2-203ENST00000447098 AGO3Q9H9G7 860 aaKnown RBP11.52□□□□□ -0.56
PTCH2-203ENST00000447098 DRG1Q9Y295 367 aaKnown RBP11.52□□□□□ -0.56
PTCH2-203ENST00000447098 RREB1Q92766 1687 aa11.52□□□□□ -0.56
PTCH2-203ENST00000447098 LAMB2P55268 1798 aa11.52□□□□□ -0.56
PTCH2-203ENST00000447098 CDK5RAP2Q96SN8 1893 aa11.52□□□□□ -0.56
PTCH2-203ENST00000447098 LY75O60449 1722 aa11.52□□□□□ -0.56
PTCH2-203ENST00000447098 SMIM31A0A1B0GVY4 71 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 TP73O15350 636 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 MSI1O43347 362 aaKnown RBP11.52□□□□□ -0.57
PTCH2-203ENST00000447098 FBXO21O94952 628 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 F9P00740 461 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 IQCF3P0C7M6 154 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 ZNF865P0CJ78 1059 aaPredicted RBP11.52□□□□□ -0.57
PTCH2-203ENST00000447098 ATXN1P54253 815 aaKnown RBP11.52□□□□□ -0.57
PTCH2-203ENST00000447098 RARS2Q5T160 578 aaKnown RBP11.52□□□□□ -0.57
PTCH2-203ENST00000447098 ANKRD22Q5VYY1 191 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 TMEM86AQ8N2M4 240 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 HAPLN2Q9GZV7 340 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 H0Y626 953 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 PROCP04070 461 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 UQCRBP14927 111 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 TPH1P17752 444 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 GCAP28676 217 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 CCR1P32246 355 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 CHN2P52757 468 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 ACTR3P61158 418 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 PDK2Q15119 407 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 CYTH1Q15438 398 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 CCDC142Q17RM4 750 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 SH3PXD2AQ5TCZ1 1133 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 CES3Q6UWW8 571 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 MRPS31Q92665 395 aaKnown RBP11.52□□□□□ -0.57
PTCH2-203ENST00000447098 SKA1Q96BD8 255 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 ZMAT2Q96NC0 199 aaKnown RBP11.52□□□□□ -0.57
PTCH2-203ENST00000447098 PANX3Q96QZ0 392 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 MAF1Q9H063 256 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 CDY1Q9Y6F8 540 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 COL4A5P29400 1685 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 ASPAP45381 313 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 TBX4P57082 545 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 GPX6P59796 221 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 PTP4A2Q12974 167 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 KLF1Q13351 362 aaPredicted RBP11.52□□□□□ -0.57
PTCH2-203ENST00000447098 CDH18Q13634 790 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 KLC3Q6P597 504 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 RBM44Q6ZP01 1051 aaKnown RBP11.52□□□□□ -0.57
PTCH2-203ENST00000447098 DEFB107AQ8IZN7 70 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 GALNT4Q8N4A0 578 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 ASIC4Q96FT7 647 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 APOL5Q9BWW9 433 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 SIX4Q9UIU6 781 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 APPL1Q9UKG1 709 aa11.52□□□□□ -0.57
PTCH2-203ENST00000447098 TMEM191CA6NGB0 347 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 SMAPO00193 183 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 DNAJC6O75061 913 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 EDN1P05305 212 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 UNGP13051 313 aaPredicted RBP11.51□□□□□ -0.57
PTCH2-203ENST00000447098 GOT1P17174 413 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 ZNF143P52747 638 aaPredicted RBP11.51□□□□□ -0.57
PTCH2-203ENST00000447098 GAD2Q05329 585 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 FOXB2Q5VYV0 432 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 EFCAB3Q8N7B9 438 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 CCNYL1Q8N7R7 359 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 WNT8BQ93098 351 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 DNAJC1Q96KC8 554 aaKnown RBP11.51□□□□□ -0.57
PTCH2-203ENST00000447098 SERPINI1Q99574 410 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 GRIP2Q9C0E4 1043 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 S100A14Q9HCY8 104 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 DNAJC16Q9Y2G8 782 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 SF3B1O75533 1304 aaKnown RBP eCLIP11.51□□□□□ -0.57
PTCH2-203ENST00000447098 LAMB1P07942 1786 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 CBX4O00257 560 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 SPAG6O75602 509 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 PIGRP01833 764 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 VCLP18206 1134 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 STIP1P31948 543 aaKnown RBP11.51□□□□□ -0.57
PTCH2-203ENST00000447098 RPL22P35268 128 aaKnown RBP11.51□□□□□ -0.57
PTCH2-203ENST00000447098 ATXN3P54252 364 aaPredicted RBP11.51□□□□□ -0.57
PTCH2-203ENST00000447098 PCBP1Q15365 356 aaKnown RBP eCLIP11.51□□□□□ -0.57
PTCH2-203ENST00000447098 SOWAHAQ2M3V2 549 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 TIGD5Q53EQ6 642 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 C1orf220Q5T0J3 134 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 ATP6V0D2Q8N8Y2 350 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 DDI1Q8WTU0 396 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 USP6NLQ92738 828 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 HDAC11Q96DB2 347 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 SERAC1Q96JX3 654 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 MRPL9Q9BYD2 267 aaKnown RBP11.51□□□□□ -0.57
PTCH2-203ENST00000447098 CDH9Q9ULB4 789 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 ADAMTSL1Q8N6G6 1762 aa11.51□□□□□ -0.57
PTCH2-203ENST00000447098 POLR2AP24928 1970 aaKnown RBP11.51□□□□□ -0.57
PTCH2-203ENST00000447098 RNASEH1O60930 286 aaKnown RBP11.51□□□□□ -0.57
PTCH2-203ENST00000447098 ITGBL1O95965 494 aaPredicted RBP11.51□□□□□ -0.57
PTCH2-203ENST00000447098 AMHP03971 560 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms