RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 PIGHQ14442 188 aaPredicted RBP18.5■□□□□ 0.55
CPSF4-205ENST00000440514 SMTNL2Q2TAL5 461 aa18.5■□□□□ 0.55
CPSF4-205ENST00000440514 ERMARDQ5T6L9 678 aa18.5■□□□□ 0.55
CPSF4-205ENST00000440514 FAM160A2Q8N612 972 aaPredicted RBP18.5■□□□□ 0.55
CPSF4-205ENST00000440514 FRMD1Q8N878 549 aa18.5■□□□□ 0.55
CPSF4-205ENST00000440514 DCAF4L2Q8NA75 395 aa18.5■□□□□ 0.55
CPSF4-205ENST00000440514 SEMA4AQ9H3S1 761 aa18.5■□□□□ 0.55
CPSF4-205ENST00000440514 ZWILCHQ9H900 591 aa18.5■□□□□ 0.55
CPSF4-205ENST00000440514 PRSS16Q9NQE7 514 aa18.5■□□□□ 0.55
CPSF4-205ENST00000440514 UVRAGQ9P2Y5 699 aa18.5■□□□□ 0.55
CPSF4-205ENST00000440514 VPS51Q9UID3 782 aa18.5■□□□□ 0.55
CPSF4-205ENST00000440514 SLC25A13Q9UJS0 675 aa18.5■□□□□ 0.55
CPSF4-205ENST00000440514 PLXND1Q9Y4D7 1925 aa18.5■□□□□ 0.55
CPSF4-205ENST00000440514 DMDP11532 3685 aa18.49■□□□□ 0.55
CPSF4-205ENST00000440514 ILVBLA1L0T0 632 aa18.49■□□□□ 0.55
CPSF4-205ENST00000440514 SOWAHDA6NJG2 315 aa18.49■□□□□ 0.55
CPSF4-205ENST00000440514 GFRA3O60609 400 aa18.49■□□□□ 0.55
CPSF4-205ENST00000440514 FECHP22830 423 aa18.49■□□□□ 0.55
CPSF4-205ENST00000440514 MAPKAPK2P49137 400 aa18.49■□□□□ 0.55
CPSF4-205ENST00000440514 TPI1P60174 286 aa18.49■□□□□ 0.55
CPSF4-205ENST00000440514 SULT2A1Q06520 285 aa18.49■□□□□ 0.55
CPSF4-205ENST00000440514 ACAP1Q15027 740 aa18.49■□□□□ 0.55
CPSF4-205ENST00000440514 HNRNPA1L2Q32P51 320 aaKnown RBP18.49■□□□□ 0.55
CPSF4-205ENST00000440514 USP39Q53GS9 565 aaKnown RBP18.49■□□□□ 0.55
CPSF4-205ENST00000440514 KCNT1Q5JUK3 1230 aa18.49■□□□□ 0.55
CPSF4-205ENST00000440514 TXNRD3NBQ6F5E7 133 aa18.49■□□□□ 0.55
CPSF4-205ENST00000440514 ALYREFQ86V81 257 aaKnown RBP18.49■□□□□ 0.55
CPSF4-205ENST00000440514 KBTBD6Q86V97 674 aa18.49■□□□□ 0.55
CPSF4-205ENST00000440514 KDM1BQ8NB78 822 aa18.49■□□□□ 0.55
CPSF4-205ENST00000440514 SPON2Q9BUD6 331 aa18.49■□□□□ 0.55
CPSF4-205ENST00000440514 C2orf49Q9BVC5 232 aaPredicted RBP18.49■□□□□ 0.55
CPSF4-205ENST00000440514 PRDM16Q9HAZ2 1276 aa18.49■□□□□ 0.55
CPSF4-205ENST00000440514 ATP13A1Q9HD20 1204 aa18.49■□□□□ 0.55
CPSF4-205ENST00000440514 TMEM110-MUSTN1A8MSY1 372 aa18.48■□□□□ 0.55
CPSF4-205ENST00000440514 MYO1FO00160 1098 aa18.48■□□□□ 0.55
CPSF4-205ENST00000440514 EEF2KO00418 725 aaKnown RBP18.48■□□□□ 0.55
CPSF4-205ENST00000440514 ZBTB24O43167 697 aaPredicted RBP18.48■□□□□ 0.55
CPSF4-205ENST00000440514 SIN3BO75182 1162 aa18.48■□□□□ 0.55
CPSF4-205ENST00000440514 PROSCO94903 275 aa18.48■□□□□ 0.55
CPSF4-205ENST00000440514 VAV1P15498 845 aa18.48■□□□□ 0.55
CPSF4-205ENST00000440514 GJC1P36383 396 aa18.48■□□□□ 0.55
CPSF4-205ENST00000440514 ACVRL1P37023 503 aa18.48■□□□□ 0.55
CPSF4-205ENST00000440514 P2RY2P41231 377 aa18.48■□□□□ 0.55
CPSF4-205ENST00000440514 SLC25A11Q02978 314 aaKnown RBP18.48■□□□□ 0.55
CPSF4-205ENST00000440514 MAP7D1Q3KQU3 841 aa18.48■□□□□ 0.55
CPSF4-205ENST00000440514 PPP6R3Q5H9R7 873 aaPredicted RBP18.48■□□□□ 0.55
CPSF4-205ENST00000440514 LINGO4Q6UY18 593 aa18.48■□□□□ 0.55
CPSF4-205ENST00000440514 ZNF783Q6ZMS7 281 aa18.48■□□□□ 0.55
CPSF4-205ENST00000440514 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.48■□□□□ 0.55
CPSF4-205ENST00000440514 TMPRSS6Q8IU80 811 aa18.48■□□□□ 0.55
CPSF4-205ENST00000440514 RTL3Q8N8U3 475 aaKnown RBP18.48■□□□□ 0.55
CPSF4-205ENST00000440514 OR2T3Q8NH03 318 aa18.48■□□□□ 0.55
CPSF4-205ENST00000440514 HSPH1Q92598 858 aa18.48■□□□□ 0.55
CPSF4-205ENST00000440514 SPACA7Q96KW9 195 aa18.48■□□□□ 0.55
CPSF4-205ENST00000440514 PPP1R9BQ96SB3 815 aa18.48■□□□□ 0.55
CPSF4-205ENST00000440514 NCAPGQ9BPX3 1015 aa18.48■□□□□ 0.55
CPSF4-205ENST00000440514 RAB23Q9ULC3 237 aa18.48■□□□□ 0.55
CPSF4-205ENST00000440514 CYP8B1Q9UNU6 501 aa18.48■□□□□ 0.55
CPSF4-205ENST00000440514 CHD5Q8TDI0 1954 aa18.48■□□□□ 0.55
CPSF4-205ENST00000440514 EDDM13A0A1B0GTR0 161 aa18.47■□□□□ 0.55
CPSF4-205ENST00000440514 CBX4O00257 560 aa18.47■□□□□ 0.55
CPSF4-205ENST00000440514 GOT1P17174 413 aa18.47■□□□□ 0.55
CPSF4-205ENST00000440514 SSR1P43307 286 aaKnown RBP18.47■□□□□ 0.55
CPSF4-205ENST00000440514 KRT83P78385 493 aa18.47■□□□□ 0.55
CPSF4-205ENST00000440514 SLC35G2Q8TBE7 412 aa18.47■□□□□ 0.55
CPSF4-205ENST00000440514 RFFLQ8WZ73 363 aa18.47■□□□□ 0.55
CPSF4-205ENST00000440514 NOL6Q9H6R4 1146 aaKnown RBP18.47■□□□□ 0.55
CPSF4-205ENST00000440514 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.47■□□□□ 0.55
CPSF4-205ENST00000440514 SUN2Q9UH99 717 aa18.47■□□□□ 0.55
CPSF4-205ENST00000440514 MBD1Q9UIS9 605 aaPredicted RBP18.47■□□□□ 0.55
CPSF4-205ENST00000440514 TFR2Q9UP52 801 aa18.47■□□□□ 0.55
CPSF4-205ENST00000440514 GPR179Q6PRD1 2367 aa18.47■□□□□ 0.55
CPSF4-205ENST00000440514 USP34Q70CQ2 3546 aa18.46■□□□□ 0.55
CPSF4-205ENST00000440514 VPS13AQ96RL7 3174 aa18.46■□□□□ 0.55
CPSF4-205ENST00000440514 K7ERQ8 282 aa18.46■□□□□ 0.55
CPSF4-205ENST00000440514 FGF10O15520 208 aaPredicted RBP18.46■□□□□ 0.55
CPSF4-205ENST00000440514 RAMP2O60895 175 aa18.46■□□□□ 0.55
CPSF4-205ENST00000440514 ZMPSTE24O75844 475 aa18.46■□□□□ 0.55
CPSF4-205ENST00000440514 LCA5LO95447 670 aa18.46■□□□□ 0.55
CPSF4-205ENST00000440514 MT-CO1P00395 513 aa18.46■□□□□ 0.55
CPSF4-205ENST00000440514 RARAP10276 462 aa18.46■□□□□ 0.55
CPSF4-205ENST00000440514 SRCP12931 536 aa18.46■□□□□ 0.55
CPSF4-205ENST00000440514 CYLC1P35663 651 aaPredicted RBP18.46■□□□□ 0.55
CPSF4-205ENST00000440514 NNMTP40261 264 aa18.46■□□□□ 0.55
CPSF4-205ENST00000440514 MAGEA1P43355 309 aa18.46■□□□□ 0.55
CPSF4-205ENST00000440514 PLK5Q496M5 336 aa18.46■□□□□ 0.55
CPSF4-205ENST00000440514 ACCSLQ4AC99 568 aa18.46■□□□□ 0.55
CPSF4-205ENST00000440514 C9orf64Q5T6V5 341 aa18.46■□□□□ 0.55
CPSF4-205ENST00000440514 IL31Q6EBC2 164 aa18.46■□□□□ 0.55
CPSF4-205ENST00000440514 RAD9BQ6WBX8 426 aa18.46■□□□□ 0.55
CPSF4-205ENST00000440514 RFX8Q6ZV50 586 aa18.46■□□□□ 0.55
CPSF4-205ENST00000440514 PSTKQ8IV42 348 aaKnown RBP18.46■□□□□ 0.55
CPSF4-205ENST00000440514 CCDC170Q8IYT3 715 aa18.46■□□□□ 0.55
CPSF4-205ENST00000440514 SH2D3CQ8N5H7 860 aa18.46■□□□□ 0.55
CPSF4-205ENST00000440514 FRS2Q8WU20 508 aa18.46■□□□□ 0.55
CPSF4-205ENST00000440514 PRCCQ92733 491 aaPredicted RBP18.46■□□□□ 0.55
CPSF4-205ENST00000440514 ARHGEF2Q92974 986 aaKnown RBP18.46■□□□□ 0.55
CPSF4-205ENST00000440514 SIPA1Q96FS4 1042 aa18.46■□□□□ 0.55
CPSF4-205ENST00000440514 DUSP15Q9H1R2 295 aaPredicted RBP18.46■□□□□ 0.55
CPSF4-205ENST00000440514 RETREG1Q9H6L5 497 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms