RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 DGKDQ16760 1214 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 PIGZQ86VD9 579 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 LRRC43Q8N309 656 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 ARNTL2Q8WYA1 636 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 ATP6V1E2Q96A05 226 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 TRAPPC9Q96Q05 1148 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 PREBQ9HCU5 417 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 PRMT7Q9NVM4 692 aaPredicted RBP12.74□□□□□ -0.37
CDH3-202ENST00000429102 UBAP1Q9NZ09 502 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 ZDHHC2Q9UIJ5 367 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 TSR3Q9UJK0 312 aaKnown RBP12.74□□□□□ -0.37
CDH3-202ENST00000429102 PMPCBO75439 489 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 SUPT3HO75486 399 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 MT-CYBP00156 380 aaPredicted RBP12.74□□□□□ -0.37
CDH3-202ENST00000429102 NMBRP28336 390 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 ADCYAP1R1P41586 468 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 CDH15P55291 814 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 GRM3Q14832 879 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 SH2D4BQ5SQS7 431 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 LDB1Q86U70 411 aaPredicted RBP12.74□□□□□ -0.37
CDH3-202ENST00000429102 MYO1HQ8N1T3 1032 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 TRIML2Q8N7C3 387 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 URGCPQ8TCY9 931 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 NR1H4Q96RI1 486 aaPredicted RBP12.74□□□□□ -0.37
CDH3-202ENST00000429102 ILKAPQ9H0C8 392 aaPredicted RBP12.74□□□□□ -0.37
CDH3-202ENST00000429102 RNF39Q9H2S5 420 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 SMARCAD1Q9H4L7 1026 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 MTMR10Q9NXD2 777 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 MOCS1Q9NZB8 636 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 CSADQ9Y600 493 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 VAPBO95292 243 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 SLC4A1P02730 911 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 MPP1Q00013 466 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 MPP3Q13368 585 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 FSCBQ5H9T9 825 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 NOMO2Q5JPE7 1267 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 TMC7Q7Z402 723 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 FERMT1Q9BQL6 677 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 DCUN1D5Q9BTE7 237 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 AURKCQ9UQB9 309 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 GNEQ9Y223 722 aaKnown RBP12.73□□□□□ -0.37
CDH3-202ENST00000429102 C19orf81C9J6K1 198 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 TRIM13O60858 407 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 MOCS2O96007 188 aaPredicted RBP12.73□□□□□ -0.37
CDH3-202ENST00000429102 NCAM1P13591 858 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 FDFT1P37268 417 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 CASP2P42575 452 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 CYLC2Q14093 348 aaPredicted RBP12.73□□□□□ -0.37
CDH3-202ENST00000429102 NADK2Q4G0N4 442 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 HABP4Q5JVS0 413 aaKnown RBP12.73□□□□□ -0.37
CDH3-202ENST00000429102 SIX6OS1Q8N1H7 587 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 DNERQ8NFT8 737 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 IFT43Q96FT9 208 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 PKP2Q99959 881 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 SLC4A5Q9BY07 1137 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 PPME1Q9Y570 386 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 KCNU1A8MYU2 1149 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 H3BSA7 217 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 ERCC2P18074 760 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 SPRP35270 261 aaPredicted RBP12.73□□□□□ -0.37
CDH3-202ENST00000429102 GHRHRQ02643 423 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 ITKQ08881 620 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 SEL1L3Q68CR1 1132 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 ARCQ7LC44 396 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 PQLC1Q8N2U9 271 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 KYQ8NBH2 561 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.73□□□□□ -0.37
CDH3-202ENST00000429102 OPTNQ96CV9 577 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 KCNK16Q96T55 309 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 ZNF670Q9BS34 389 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 ACE2Q9BYF1 805 aaPredicted RBP12.73□□□□□ -0.37
CDH3-202ENST00000429102 RHOBTB2Q9BYZ6 727 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 CDH19Q9H159 772 aa12.73□□□□□ -0.37
CDH3-202ENST00000429102 TTC24A2A3L6 582 aaPredicted RBP12.72□□□□□ -0.37
CDH3-202ENST00000429102 FAM149AA5PLN7 773 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 BIRC5O15392 142 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 HBP1O60381 514 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 PGAM1P18669 254 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 NFKB1P19838 968 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 GALK1P51570 392 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 PRPSAP1Q14558 356 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 ARHGAP17Q68EM7 881 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 BNC2Q6ZN30 1099 aaPredicted RBP12.72□□□□□ -0.37
CDH3-202ENST00000429102 ACAD11Q709F0 780 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 KCNMB4Q86W47 210 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 CDY2AQ9Y6F7 541 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 CDY1Q9Y6F8 540 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 MAGEB3O15480 346 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 GCATO75600 419 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 ENDOD1O94919 500 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 MT-ND1P03886 318 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 PTPN1P18031 435 aaKnown RBP12.72□□□□□ -0.37
CDH3-202ENST00000429102 TFEBP19484 476 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 GSTA3Q16772 222 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 C11orf91Q3C1V1 193 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 ANKRD20A4Q4UJ75 823 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 LBX2Q6XYB7 198 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 NT5DC4Q86YG4 428 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 CHST13Q8NET6 341 aa12.72□□□□□ -0.37
CDH3-202ENST00000429102 SLC35F5Q8WV83 523 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms