RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 CYP3A7-CYP3A51PA0A087WV96 503 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 AGAP5A6NIR3 686 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 E7EVH7 732 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 RRHO14718 337 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 INPPL1O15357 1258 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 USP12O75317 370 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 FAM155BO75949 473 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 KRT38O76015 456 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 CNTN5O94779 1100 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 KAT7O95251 611 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 ENO1P06733 434 aaKnown RBP2.95□□□□□ -1.94
VPS41-206ENST00000418457 HSP90AB1P08238 724 aaKnown RBP2.95□□□□□ -1.94
VPS41-206ENST00000418457 AKR1A1P14550 325 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 IGFBP2P18065 325 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 CYP3A7P24462 503 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 EPHB2P29323 1055 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 IDUAP35475 653 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 ADD2P35612 726 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 AARSP49588 968 aaKnown RBP eCLIP2.95□□□□□ -1.94
VPS41-206ENST00000418457 PPM1FP49593 454 aaPredicted RBP2.95□□□□□ -1.94
VPS41-206ENST00000418457 MCM2P49736 904 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 ZNF84P51523 738 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 RCAN1P53805 252 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 ARL4CP56559 192 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 FOXL2P58012 376 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 YPEL5P62699 121 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 SRSF4Q08170 494 aaKnown RBP2.95□□□□□ -1.94
VPS41-206ENST00000418457 DMWDQ09019 674 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 CUL4BQ13620 913 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 SEC23BQ15437 767 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 TAF5Q15542 800 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 KLHL40Q2TBA0 621 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 ANXA2RQ3ZCQ2 193 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 ANKRD45Q5TZF3 282 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 MEX3CQ5U5Q3 659 aaKnown RBP2.95□□□□□ -1.94
VPS41-206ENST00000418457 ANO7Q6IWH7 933 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 DHRS13Q6UX07 377 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 LDHAL6AQ6ZMR3 332 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 SYT13Q7L8C5 426 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 TFAP2DQ7Z6R9 452 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 CSGALNACT1Q8TDX6 532 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 NTN5Q8WTR8 489 aaPredicted RBP2.95□□□□□ -1.94
VPS41-206ENST00000418457 THAP4Q8WY91 577 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 DDB2Q92466 427 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 PIGKQ92643 395 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 MAP4K1Q92918 833 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 GCC1Q96CN9 775 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 FCRL5Q96RD9 977 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 SH2D3AQ9BRG2 576 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 ABHD14AQ9BUJ0 271 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 HTATIP2Q9BUP3 242 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 TM2D2Q9BX73 214 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 SFXN1Q9H9B4 322 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 TMLHEQ9NVH6 421 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 KCND3Q9UK17 655 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 PCDHGB3Q9Y5G1 929 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 PCDHA10Q9Y5I2 948 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 COPG1Q9Y678 874 aaKnown RBP2.95□□□□□ -1.94
VPS41-206ENST00000418457 MED14O60244 1454 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 FRMPD1Q5SYB0 1578 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 EMSYQ7Z589 1322 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 PPIP5K1Q6PFW1 1433 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 NSD3Q9BZ95 1437 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 ADGRB3O60242 1522 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 ATP7AQ04656 1500 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 SMIM35A0A1B0GVV1 85 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 DYNC1I1O14576 645 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 HNRNPRO43390 633 aaKnown RBP2.94□□□□□ -1.94
VPS41-206ENST00000418457 ZNF500O60304 480 aaPredicted RBP2.94□□□□□ -1.94
VPS41-206ENST00000418457 HEXIM1O94992 359 aaKnown RBP2.94□□□□□ -1.94
VPS41-206ENST00000418457 SGPL1O95470 568 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 PLAUP00749 431 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 TFRCP02786 760 aaKnown RBP2.94□□□□□ -1.94
VPS41-206ENST00000418457 CD63P08962 238 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 ST6GAL1P15907 406 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 TGM2P21980 687 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 FBLP22087 321 aaKnown RBP2.94□□□□□ -1.94
VPS41-206ENST00000418457 RPS6KB1P23443 525 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 ARHGAP25P42331 645 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 SOX2P48431 317 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 CCT5P48643 541 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 RBM5P52756 815 aaKnown RBP eCLIP2.94□□□□□ -1.94
VPS41-206ENST00000418457 C21orf58P58505 322 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 NUCB2P80303 420 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 SHC2P98077 582 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 HSF1Q00613 529 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 GHRHRQ02643 423 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 PPFIA1Q13136 1202 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 MTA1Q13330 715 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 PDCLQ13371 301 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 SMAD1Q15797 465 aaKnown RBP2.94□□□□□ -1.94
VPS41-206ENST00000418457 SRSF7Q16629 238 aaKnown RBP eCLIP2.94□□□□□ -1.94
VPS41-206ENST00000418457 ALDH1L2Q3SY69 923 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 BMP2KLQ5H9B9 411 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 SLC18B1Q6NT16 456 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 SYNE3Q6ZMZ3 975 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 YTHDF3Q7Z739 585 aaKnown RBP2.94□□□□□ -1.94
VPS41-206ENST00000418457 MOGAT3Q86VF5 341 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 RFX6Q8HWS3 928 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 RHPN2Q8IUC4 686 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms