RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 RNF219Q5W0B1 726 aaPredicted RBP13.27□□□□□ -0.29
CHRNA1-203ENST00000409219 GUSBP11Q6P575 273 aa13.27□□□□□ -0.29
CHRNA1-203ENST00000409219 FOXR1Q6PIV2 292 aa13.27□□□□□ -0.29
CHRNA1-203ENST00000409219 CFAP52Q8N1V2 620 aa13.27□□□□□ -0.29
CHRNA1-203ENST00000409219 ARL14Q8N4G2 192 aa13.27□□□□□ -0.29
CHRNA1-203ENST00000409219 KIAA0895Q8NCT3 520 aa13.27□□□□□ -0.29
CHRNA1-203ENST00000409219 ARRDC3Q96B67 414 aa13.27□□□□□ -0.29
CHRNA1-203ENST00000409219 GRAMD1AQ96CP6 724 aa13.27□□□□□ -0.29
CHRNA1-203ENST00000409219 FZD3Q9NPG1 666 aa13.27□□□□□ -0.29
CHRNA1-203ENST00000409219 CISHQ9NSE2 258 aa13.27□□□□□ -0.29
CHRNA1-203ENST00000409219 EVA1BQ9NVM1 165 aa13.27□□□□□ -0.29
CHRNA1-203ENST00000409219 TSPAN16Q9UKR8 245 aa13.27□□□□□ -0.29
CHRNA1-203ENST00000409219 SPENQ96T58 3664 aaKnown RBP13.26□□□□□ -0.29
CHRNA1-203ENST00000409219 MYO9AB2RTY4 2548 aa13.26□□□□□ -0.29
CHRNA1-203ENST00000409219 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.26□□□□□ -0.29
CHRNA1-203ENST00000409219 PVALEFA0A1B0GWK0 134 aa13.26□□□□□ -0.29
CHRNA1-203ENST00000409219 SCAMP1O15126 338 aa13.26□□□□□ -0.29
CHRNA1-203ENST00000409219 SLC31A1O15431 190 aa13.26□□□□□ -0.29
CHRNA1-203ENST00000409219 RNGTTO60942 597 aaKnown RBP13.26□□□□□ -0.29
CHRNA1-203ENST00000409219 TNFSF15O95150 251 aa13.26□□□□□ -0.29
CHRNA1-203ENST00000409219 MOCS3O95396 460 aa13.26□□□□□ -0.29
CHRNA1-203ENST00000409219 NASPP49321 788 aaPredicted RBP13.26□□□□□ -0.29
CHRNA1-203ENST00000409219 PDX1P52945 283 aa13.26□□□□□ -0.29
CHRNA1-203ENST00000409219 TBX4P57082 545 aa13.26□□□□□ -0.29
CHRNA1-203ENST00000409219 TAS2R38P59533 333 aa13.26□□□□□ -0.29
CHRNA1-203ENST00000409219 BST2Q10589 180 aaKnown RBP13.26□□□□□ -0.29
CHRNA1-203ENST00000409219 ZNF177Q13360 481 aaPredicted RBP13.26□□□□□ -0.29
CHRNA1-203ENST00000409219 CDKN3Q16667 212 aa13.26□□□□□ -0.29
CHRNA1-203ENST00000409219 MS4A13Q5J8X5 152 aa13.26□□□□□ -0.29
CHRNA1-203ENST00000409219 IQUBQ8NA54 791 aa13.26□□□□□ -0.29
CHRNA1-203ENST00000409219 FRS2Q8WU20 508 aa13.26□□□□□ -0.29
CHRNA1-203ENST00000409219 KLK6Q92876 244 aa13.26□□□□□ -0.29
CHRNA1-203ENST00000409219 AZIN2Q96A70 460 aa13.26□□□□□ -0.29
CHRNA1-203ENST00000409219 NOX5Q96PH1 765 aa13.26□□□□□ -0.29
CHRNA1-203ENST00000409219 DUSP23Q9BVJ7 150 aa13.26□□□□□ -0.29
CHRNA1-203ENST00000409219 MMRN2Q9H8L6 949 aa13.26□□□□□ -0.29
CHRNA1-203ENST00000409219 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.26□□□□□ -0.29
CHRNA1-203ENST00000409219 CHMP5Q9NZZ3 219 aa13.26□□□□□ -0.29
CHRNA1-203ENST00000409219 NEMP2A6NFY4 417 aa13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 K7ELQ4 463 aaPredicted RBP13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 PDXKO00764 312 aa13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 CASC3O15234 703 aaKnown RBP13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 FAM87AP0C7U9 286 aa13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 GP1BBP13224 206 aa13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 MLLT3P42568 568 aaPredicted RBP13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 TLE1Q04724 770 aa13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 STK4Q13043 487 aa13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 SRSF6Q13247 344 aaKnown RBP13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 DCAF6Q58WW2 860 aa13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 ZNF542PQ5EBM4 170 aa13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 ZCCHC8Q6NZY4 707 aaKnown RBP13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 SHC4Q6S5L8 630 aa13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 CRTC1Q6UUV9 634 aa13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 XKR5Q6UX68 686 aa13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 GCNT7Q6ZNI0 430 aa13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 RBM44Q6ZP01 1051 aaKnown RBP13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 EFL1Q7Z2Z2 1120 aaKnown RBP13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 CCDC117Q8IWD4 279 aaPredicted RBP13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 SIX6OS1Q8N1H7 587 aa13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 SCML4Q8N228 414 aa13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 LINC00301Q8NCQ3 95 aa13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 CCDC150Q8NCX0 1101 aa13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 WDR36Q8NI36 951 aaKnown RBP13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 FCRL2Q96LA5 508 aaPredicted RBP13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 ARHGAP9Q9BRR9 750 aa13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 MAGEF1Q9HAY2 307 aa13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 PREBQ9HCU5 417 aa13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 CNGB3Q9NQW8 809 aa13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 DACH1Q9UI36 760 aa13.25□□□□□ -0.29
CHRNA1-203ENST00000409219 CPED1A4D0V7 1026 aa13.24□□□□□ -0.29
CHRNA1-203ENST00000409219 ITGB2P05107 769 aa13.24□□□□□ -0.29
CHRNA1-203ENST00000409219 ITGA2BP08514 1039 aa13.24□□□□□ -0.29
CHRNA1-203ENST00000409219 CLDN2P57739 230 aa13.24□□□□□ -0.29
CHRNA1-203ENST00000409219 DRAP1Q14919 205 aaPredicted RBP13.24□□□□□ -0.29
CHRNA1-203ENST00000409219 STK38Q15208 465 aa13.24□□□□□ -0.29
CHRNA1-203ENST00000409219 FAM46CQ5VWP2 391 aa13.24□□□□□ -0.29
CHRNA1-203ENST00000409219 DSG4Q86SJ6 1040 aa13.24□□□□□ -0.29
CHRNA1-203ENST00000409219 TTC39CQ8N584 583 aa13.24□□□□□ -0.29
CHRNA1-203ENST00000409219 ZNF548Q8NEK5 533 aaPredicted RBP13.24□□□□□ -0.29
CHRNA1-203ENST00000409219 OR8D1Q8WZ84 308 aa13.24□□□□□ -0.29
CHRNA1-203ENST00000409219 SEMA4DQ92854 862 aa13.24□□□□□ -0.29
CHRNA1-203ENST00000409219 SGF29Q96ES7 293 aa13.24□□□□□ -0.29
CHRNA1-203ENST00000409219 IFT43Q96FT9 208 aa13.24□□□□□ -0.29
CHRNA1-203ENST00000409219 DDX50Q9BQ39 737 aaKnown RBP13.24□□□□□ -0.29
CHRNA1-203ENST00000409219 WDR70Q9NW82 654 aa13.24□□□□□ -0.29
CHRNA1-203ENST00000409219 DNAJC28Q9NX36 388 aa13.24□□□□□ -0.29
CHRNA1-203ENST00000409219 FRMD4BQ9Y2L6 1034 aa13.24□□□□□ -0.29
CHRNA1-203ENST00000409219 USP9YO00507 2555 aaPredicted RBP13.24□□□□□ -0.29
CHRNA1-203ENST00000409219 A0A1W2PQU0 124 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 EME2A4GXA9 379 aaPredicted RBP13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 MAPK13O15264 365 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 KLRC4O43908 158 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 TCEA3O75764 348 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 GABBR2O75899 941 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 LCP1P13796 627 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 PDCP20941 246 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 HNRNPA2B1P22626 353 aaKnown RBP13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 NNMTP40261 264 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 AFMP43652 599 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 HNRNPKP61978 463 aaKnown RBP eCLIP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms