RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 NEFHP12036 1026 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 GMPRP36959 345 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 GRIK1P39086 918 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 RWDD4Q6NW29 188 aaKnown RBP14.26□□□□□ -0.13
SNCA-204ENST00000394989 ARHGAP12Q8IWW6 846 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 TMEM120AQ9BXJ8 343 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 OSBPL1AQ9BXW6 950 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 LRMDAQ9H2I8 198 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 FBXO6Q9NRD1 293 aaPredicted RBP14.26□□□□□ -0.13
SNCA-204ENST00000394989 ABCC13Q9NSE7 274 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 ZFP69BQ9UJL9 534 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 TRHDEQ9UKU6 1024 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 SQORQ9Y6N5 450 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 FAM237BA0A1B0GVD1 139 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 SMIM24O75264 130 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 PAGE1O75459 146 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 JCHAINP01591 159 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 PRKCGP05129 697 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 BPGMP07738 259 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 OCRLQ01968 901 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 CHI3L2Q15782 390 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 SLC39A12Q504Y0 691 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 MANEALQ5VSG8 457 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 ZNF449Q6P9G9 518 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 RASSF3Q86WH2 238 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 E2F7Q96AV8 911 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 MFSD3Q96ES6 412 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 SMOC2Q9H3U7 446 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 ZFATQ9P243 1243 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 HEY2Q9UBP5 337 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 PCDHB8Q9UN66 801 aa14.26□□□□□ -0.13
SNCA-204ENST00000394989 MAGED2Q9UNF1 606 aaPredicted RBP14.26□□□□□ -0.13
SNCA-204ENST00000394989 ARHGAP42A6NI28 874 aa14.25□□□□□ -0.13
SNCA-204ENST00000394989 MTSS1O43312 755 aa14.25□□□□□ -0.13
SNCA-204ENST00000394989 RIPK1Q13546 671 aa14.25□□□□□ -0.13
SNCA-204ENST00000394989 SPANXN3Q5MJ09 141 aa14.25□□□□□ -0.13
SNCA-204ENST00000394989 SPDYAQ5MJ70 313 aa14.25□□□□□ -0.13
SNCA-204ENST00000394989 C16orf46Q6P387 395 aa14.25□□□□□ -0.13
SNCA-204ENST00000394989 LONP2Q86WA8 852 aa14.25□□□□□ -0.13
SNCA-204ENST00000394989 SKA1Q96BD8 255 aa14.25□□□□□ -0.13
SNCA-204ENST00000394989 C7orf26Q96N11 449 aa14.25□□□□□ -0.13
SNCA-204ENST00000394989 AGAP2Q99490 1192 aa14.25□□□□□ -0.13
SNCA-204ENST00000394989 PIDD1Q9HB75 910 aa14.25□□□□□ -0.13
SNCA-204ENST00000394989 IRAK4Q9NWZ3 460 aa14.25□□□□□ -0.13
SNCA-204ENST00000394989 DNAJB4Q9UDY4 337 aa14.25□□□□□ -0.13
SNCA-204ENST00000394989 NYNRINQ9P2P1 1898 aaKnown RBP14.25□□□□□ -0.13
SNCA-204ENST00000394989 PAX3P23760 479 aa14.25□□□□□ -0.13
SNCA-204ENST00000394989 SERPINB3P29508 390 aa14.25□□□□□ -0.13
SNCA-204ENST00000394989 HOXC13P31276 330 aa14.25□□□□□ -0.13
SNCA-204ENST00000394989 ABL2P42684 1182 aa14.25□□□□□ -0.13
SNCA-204ENST00000394989 ARFIP2P53365 341 aa14.25□□□□□ -0.13
SNCA-204ENST00000394989 TMPRSS15P98073 1019 aa14.25□□□□□ -0.13
SNCA-204ENST00000394989 PPM1JQ5JR12 505 aa14.25□□□□□ -0.13
SNCA-204ENST00000394989 SDHAF4Q5VUM1 108 aa14.25□□□□□ -0.13
SNCA-204ENST00000394989 ZCCHC23Q6ZST2 131 aa14.25□□□□□ -0.13
SNCA-204ENST00000394989 OTOP3Q7RTS5 596 aa14.25□□□□□ -0.13
SNCA-204ENST00000394989 NUDCD3Q8IVD9 361 aa14.25□□□□□ -0.13
SNCA-204ENST00000394989 COLGALT2Q8IYK4 626 aa14.25□□□□□ -0.13
SNCA-204ENST00000394989 DNAAF3Q8N9W5 541 aa14.25□□□□□ -0.13
SNCA-204ENST00000394989 ZNF669Q96BR6 464 aaPredicted RBP14.25□□□□□ -0.13
SNCA-204ENST00000394989 LRRC40Q9H9A6 602 aa14.25□□□□□ -0.13
SNCA-204ENST00000394989 ERI2A8K979 691 aaKnown RBP14.24□□□□□ -0.13
SNCA-204ENST00000394989 AOC2O75106 756 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 SNNO75324 88 aaPredicted RBP14.24□□□□□ -0.13
SNCA-204ENST00000394989 GPR15P49685 360 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 IRX4P78413 519 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 NAB1Q13506 487 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 BTBD8Q5XKL5 378 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 GLB1LQ6UWU2 654 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 C4orf50Q6ZRC1 276 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 SLC24A5Q71RS6 500 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 RNF180Q86T96 592 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.24□□□□□ -0.13
SNCA-204ENST00000394989 AZIN2Q96A70 460 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 HAPLN3Q96S86 360 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 VAT1Q99536 393 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 PPP1R12CQ9BZL4 782 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 VWA8A3KMH1 1905 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 A0A1W2PQH9 124 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 DFFAO00273 331 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 MAP3K13O43283 966 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 CACNG3O60359 315 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 ZNF189O75820 626 aaPredicted RBP14.24□□□□□ -0.13
SNCA-204ENST00000394989 USP1O94782 785 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 ALDH1A1P00352 501 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 MYL2P10916 166 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 TPH1P17752 444 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 SP3Q02447 781 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 ANKRD20A4Q4UJ75 823 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 MAB21L3Q8N8X9 362 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 MAGEC3Q8TD91 643 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 ACMSDQ8TDX5 336 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 USP33Q8TEY7 942 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 FCRL2Q96LA5 508 aaPredicted RBP14.24□□□□□ -0.13
SNCA-204ENST00000394989 CHRAC1Q9NRG0 131 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 ABI2Q9NYB9 513 aaPredicted RBP14.24□□□□□ -0.13
SNCA-204ENST00000394989 ATP9BO43861 1147 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 ATP5HO75947 161 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 OAZ2O95190 189 aa14.24□□□□□ -0.13
SNCA-204ENST00000394989 EOMESO95936 686 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms