RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 IRX4P78413 519 aa21.11■□□□□ 0.97
SMNDC1-201ENST00000369592 ASIC2Q16515 512 aa21.11■□□□□ 0.97
SMNDC1-201ENST00000369592 SFMBT2Q5VUG0 894 aa21.11■□□□□ 0.97
SMNDC1-201ENST00000369592 SLC23A3Q6PIS1 610 aa21.11■□□□□ 0.97
SMNDC1-201ENST00000369592 C12orf50Q8NA57 414 aaPredicted RBP21.11■□□□□ 0.97
SMNDC1-201ENST00000369592 NTAN1Q96AB6 310 aa21.11■□□□□ 0.97
SMNDC1-201ENST00000369592 RPL10LQ96L21 214 aaKnown RBP21.11■□□□□ 0.97
SMNDC1-201ENST00000369592 NUP58Q9BVL2 599 aa21.11■□□□□ 0.97
SMNDC1-201ENST00000369592 MPP6Q9NZW5 540 aa21.11■□□□□ 0.97
SMNDC1-201ENST00000369592 CHD8Q9HCK8 2581 aa21.1■□□□□ 0.97
SMNDC1-201ENST00000369592 ADAMTS9Q9P2N4 1935 aa21.1■□□□□ 0.97
SMNDC1-201ENST00000369592 EDDM13A0A1B0GTR0 161 aa21.1■□□□□ 0.97
SMNDC1-201ENST00000369592 DDX3XO00571 662 aaKnown RBP eCLIP21.1■□□□□ 0.97
SMNDC1-201ENST00000369592 KHNYNO15037 678 aaKnown RBP21.1■□□□□ 0.97
SMNDC1-201ENST00000369592 ADRB1P08588 477 aa21.1■□□□□ 0.97
SMNDC1-201ENST00000369592 TNFAIP3P21580 790 aa21.1■□□□□ 0.97
SMNDC1-201ENST00000369592 GPD1P21695 349 aa21.1■□□□□ 0.97
SMNDC1-201ENST00000369592 ZNF143P52747 638 aaPredicted RBP21.1■□□□□ 0.97
SMNDC1-201ENST00000369592 UBASH3AP57075 661 aa21.1■□□□□ 0.97
SMNDC1-201ENST00000369592 SCAPQ12770 1279 aa21.1■□□□□ 0.97
SMNDC1-201ENST00000369592 AASDHQ4L235 1098 aaPredicted RBP21.1■□□□□ 0.97
SMNDC1-201ENST00000369592 HGSNATQ68CP4 663 aa21.1■□□□□ 0.97
SMNDC1-201ENST00000369592 ZNF776Q68DI1 518 aaPredicted RBP21.1■□□□□ 0.97
SMNDC1-201ENST00000369592 PLEKHA7Q6IQ23 1121 aa21.1■□□□□ 0.97
SMNDC1-201ENST00000369592 PPP1R2P3Q6NXS1 205 aa21.1■□□□□ 0.97
SMNDC1-201ENST00000369592 C1orf216Q8TAB5 229 aa21.1■□□□□ 0.97
SMNDC1-201ENST00000369592 FAM172AQ8WUF8 416 aa21.1■□□□□ 0.97
SMNDC1-201ENST00000369592 FOXJ1Q92949 421 aa21.1■□□□□ 0.97
SMNDC1-201ENST00000369592 HSPA12BQ96MM6 686 aa21.1■□□□□ 0.97
SMNDC1-201ENST00000369592 PPP1R9BQ96SB3 815 aa21.1■□□□□ 0.97
SMNDC1-201ENST00000369592 SELENOOQ9BVL4 669 aa21.1■□□□□ 0.97
SMNDC1-201ENST00000369592 MAGEB5Q9BZ81 275 aa21.1■□□□□ 0.97
SMNDC1-201ENST00000369592 PCED1AQ9H1Q7 454 aa21.1■□□□□ 0.97
SMNDC1-201ENST00000369592 CAPN10Q9HC96 672 aa21.1■□□□□ 0.97
SMNDC1-201ENST00000369592 SEPT11Q9NVA2 429 aaKnown RBP21.1■□□□□ 0.97
SMNDC1-201ENST00000369592 USP24Q9UPU5 2620 aa21.09■□□□□ 0.97
SMNDC1-201ENST00000369592 METTL12A8MUP2 240 aa21.09■□□□□ 0.97
SMNDC1-201ENST00000369592 CDX4O14627 284 aaPredicted RBP21.09■□□□□ 0.97
SMNDC1-201ENST00000369592 OGDHQ02218 1023 aa21.09■□□□□ 0.97
SMNDC1-201ENST00000369592 CDO1Q16878 200 aa21.09■□□□□ 0.97
SMNDC1-201ENST00000369592 STPG1Q5TH74 334 aa21.09■□□□□ 0.97
SMNDC1-201ENST00000369592 RNF219Q5W0B1 726 aaPredicted RBP21.09■□□□□ 0.97
SMNDC1-201ENST00000369592 DNAJC24Q6P3W2 148 aa21.09■□□□□ 0.97
SMNDC1-201ENST00000369592 LRRC31Q6UY01 552 aa21.09■□□□□ 0.97
SMNDC1-201ENST00000369592 CCDC185Q8N715 623 aa21.09■□□□□ 0.97
SMNDC1-201ENST00000369592 SYN2Q92777 582 aaPredicted RBP21.09■□□□□ 0.97
SMNDC1-201ENST00000369592 GPR174Q9BXC1 333 aa21.09■□□□□ 0.97
SMNDC1-201ENST00000369592 RETREG1Q9H6L5 497 aa21.09■□□□□ 0.97
SMNDC1-201ENST00000369592 HS3ST2Q9Y278 367 aa21.09■□□□□ 0.97
SMNDC1-201ENST00000369592 ATXN2Q99700 1313 aaKnown RBP21.08■□□□□ 0.97
SMNDC1-201ENST00000369592 FAM72CH0Y354 149 aa21.08■□□□□ 0.97
SMNDC1-201ENST00000369592 CCP110O43303 1012 aa21.08■□□□□ 0.97
SMNDC1-201ENST00000369592 NDUFS2O75306 463 aa21.08■□□□□ 0.97
SMNDC1-201ENST00000369592 ACADMP11310 421 aa21.08■□□□□ 0.97
SMNDC1-201ENST00000369592 VAV1P15498 845 aa21.08■□□□□ 0.97
SMNDC1-201ENST00000369592 ACSL1P33121 698 aa21.08■□□□□ 0.97
SMNDC1-201ENST00000369592 TPM4P67936 248 aa21.08■□□□□ 0.97
SMNDC1-201ENST00000369592 MAMLD1Q13495 774 aa21.08■□□□□ 0.97
SMNDC1-201ENST00000369592 TRIM61Q5EBN2 209 aa21.08■□□□□ 0.97
SMNDC1-201ENST00000369592 FAM72AQ5TYM5 149 aa21.08■□□□□ 0.97
SMNDC1-201ENST00000369592 FAM72DQ6L9T8 149 aa21.08■□□□□ 0.97
SMNDC1-201ENST00000369592 ZNF783Q6ZMS7 281 aa21.08■□□□□ 0.97
SMNDC1-201ENST00000369592 USP30Q70CQ3 517 aa21.08■□□□□ 0.97
SMNDC1-201ENST00000369592 NLRP14Q86W24 1093 aa21.08■□□□□ 0.97
SMNDC1-201ENST00000369592 FAM72BQ86X60 149 aa21.08■□□□□ 0.97
SMNDC1-201ENST00000369592 CACUL1Q86Y37 369 aa21.08■□□□□ 0.97
SMNDC1-201ENST00000369592 FAM131CQ96AQ9 280 aa21.08■□□□□ 0.97
SMNDC1-201ENST00000369592 CNPY3Q9BT09 278 aa21.08■□□□□ 0.97
SMNDC1-201ENST00000369592 ZYG11BQ9C0D3 744 aa21.08■□□□□ 0.97
SMNDC1-201ENST00000369592 PABPC3Q9H361 631 aaKnown RBP21.08■□□□□ 0.97
SMNDC1-201ENST00000369592 OR12D3Q9UGF7 316 aa21.08■□□□□ 0.97
SMNDC1-201ENST00000369592 SCML1Q9UN30 329 aa21.08■□□□□ 0.97
SMNDC1-201ENST00000369592 CHD6Q8TD26 2715 aa21.08■□□□□ 0.96
SMNDC1-201ENST00000369592 A0A0D9SEW6 157 aa21.07■□□□□ 0.96
SMNDC1-201ENST00000369592 ILVBLA1L0T0 632 aa21.07■□□□□ 0.96
SMNDC1-201ENST00000369592 ZMPSTE24O75844 475 aa21.07■□□□□ 0.96
SMNDC1-201ENST00000369592 NUMBP49757 651 aa21.07■□□□□ 0.96
SMNDC1-201ENST00000369592 DUOXA1Q1HG43 343 aa21.07■□□□□ 0.96
SMNDC1-201ENST00000369592 SH2D3CQ8N5H7 860 aa21.07■□□□□ 0.96
SMNDC1-201ENST00000369592 DCAF4L2Q8NA75 395 aa21.07■□□□□ 0.96
SMNDC1-201ENST00000369592 CEP76Q8TAP6 659 aa21.07■□□□□ 0.96
SMNDC1-201ENST00000369592 MCEEQ96PE7 176 aa21.07■□□□□ 0.96
SMNDC1-201ENST00000369592 EDEM2Q9BV94 578 aa21.07■□□□□ 0.96
SMNDC1-201ENST00000369592 ISCUQ9H1K1 167 aa21.07■□□□□ 0.96
SMNDC1-201ENST00000369592 SERGEFQ9UGK8 458 aa21.07■□□□□ 0.96
SMNDC1-201ENST00000369592 ADAMTS1Q9UHI8 967 aa21.07■□□□□ 0.96
SMNDC1-201ENST00000369592 VPS51Q9UID3 782 aa21.07■□□□□ 0.96
SMNDC1-201ENST00000369592 VPS28Q9UK41 221 aa21.07■□□□□ 0.96
SMNDC1-201ENST00000369592 CAPN11Q9UMQ6 739 aa21.07■□□□□ 0.96
SMNDC1-201ENST00000369592 PCNX2A6NKB5 2137 aa21.07■□□□□ 0.96
SMNDC1-201ENST00000369592 GOLGA6L19H0YKK7 550 aa21.06■□□□□ 0.96
SMNDC1-201ENST00000369592 SNAP91O60641 907 aa21.06■□□□□ 0.96
SMNDC1-201ENST00000369592 SRGAP2O75044 1071 aa21.06■□□□□ 0.96
SMNDC1-201ENST00000369592 MT-CO1P00395 513 aa21.06■□□□□ 0.96
SMNDC1-201ENST00000369592 RHOCP08134 193 aa21.06■□□□□ 0.96
SMNDC1-201ENST00000369592 SERPINF2P08697 491 aa21.06■□□□□ 0.96
SMNDC1-201ENST00000369592 SKILP12757 684 aa21.06■□□□□ 0.96
SMNDC1-201ENST00000369592 KLHL30Q0D2K2 578 aa21.06■□□□□ 0.96
SMNDC1-201ENST00000369592 SEMA3BQ13214 749 aa21.06■□□□□ 0.96
SMNDC1-201ENST00000369592 ELAVL3Q14576 367 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms