RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 TMC3Q7Z5M5 1100 aa10.26□□□□□ -0.77
SIM1-202ENST00000369208 KIF18BQ86Y91 864 aa10.26□□□□□ -0.77
SIM1-202ENST00000369208 KSR1Q8IVT5 923 aa10.26□□□□□ -0.77
SIM1-202ENST00000369208 DNERQ8NFT8 737 aa10.26□□□□□ -0.77
SIM1-202ENST00000369208 PRCCQ92733 491 aaPredicted RBP10.26□□□□□ -0.77
SIM1-202ENST00000369208 ELMO2Q96JJ3 720 aa10.26□□□□□ -0.77
SIM1-202ENST00000369208 MKNK1Q9BUB5 465 aa10.26□□□□□ -0.77
SIM1-202ENST00000369208 SRGNP10124 158 aa10.26□□□□□ -0.77
SIM1-202ENST00000369208 GPD1P21695 349 aa10.26□□□□□ -0.77
SIM1-202ENST00000369208 KLRC2P26717 231 aa10.26□□□□□ -0.77
SIM1-202ENST00000369208 RPA1P27694 616 aa10.26□□□□□ -0.77
SIM1-202ENST00000369208 CCR3P51677 355 aa10.26□□□□□ -0.77
SIM1-202ENST00000369208 MAPK12P53778 367 aa10.26□□□□□ -0.77
SIM1-202ENST00000369208 PLA2G4FQ68DD2 849 aa10.26□□□□□ -0.77
SIM1-202ENST00000369208 USP50Q70EL3 339 aaPredicted RBP10.26□□□□□ -0.77
SIM1-202ENST00000369208 FGD2Q7Z6J4 655 aa10.26□□□□□ -0.77
SIM1-202ENST00000369208 CKAP2Q8WWK9 683 aa10.26□□□□□ -0.77
SIM1-202ENST00000369208 FUCA2Q9BTY2 467 aa10.26□□□□□ -0.77
SIM1-202ENST00000369208 GTPBP2Q9BX10 602 aaKnown RBP10.26□□□□□ -0.77
SIM1-202ENST00000369208 TLR8Q9NR97 1041 aaKnown RBP10.26□□□□□ -0.77
SIM1-202ENST00000369208 DPP3Q9NY33 737 aa10.26□□□□□ -0.77
SIM1-202ENST00000369208 EDARQ9UNE0 448 aa10.26□□□□□ -0.77
SIM1-202ENST00000369208 GYS1P13807 737 aa10.26□□□□□ -0.77
SIM1-202ENST00000369208 ZNF23P17027 643 aa10.26□□□□□ -0.77
SIM1-202ENST00000369208 KIZQ2M2Z5 673 aa10.26□□□□□ -0.77
SIM1-202ENST00000369208 ZC3H12AQ5D1E8 599 aaKnown RBP10.26□□□□□ -0.77
SIM1-202ENST00000369208 BORAQ6PGQ7 559 aa10.26□□□□□ -0.77
SIM1-202ENST00000369208 RPS6KB2Q9UBS0 482 aa10.26□□□□□ -0.77
SIM1-202ENST00000369208 AAR2Q9Y312 384 aaKnown RBP10.26□□□□□ -0.77
SIM1-202ENST00000369208 DYRK1BQ9Y463 629 aa10.26□□□□□ -0.77
SIM1-202ENST00000369208 PCDHB2Q9Y5E7 798 aa10.26□□□□□ -0.77
SIM1-202ENST00000369208 USP42Q9H9J4 1324 aaKnown RBP10.25□□□□□ -0.77
SIM1-202ENST00000369208 POLRMTO00411 1230 aaKnown RBP10.25□□□□□ -0.77
SIM1-202ENST00000369208 AKR1A1P14550 325 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 ME2P23368 584 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 PTPN3P26045 913 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 AP3S2P59780 193 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 LEMD2Q8NC56 503 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 IRGQQ8WZA9 623 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 CCSER1Q9C0I3 900 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 ILKAPQ9H0C8 392 aaPredicted RBP10.25□□□□□ -0.77
SIM1-202ENST00000369208 RBMX2Q9Y388 322 aaKnown RBP10.25□□□□□ -0.77
SIM1-202ENST00000369208 TGFB3P10600 412 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 GTF2E2P29084 291 aaKnown RBP10.25□□□□□ -0.77
SIM1-202ENST00000369208 GOLGA7BQ2TAP0 167 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 TTC23Q5W5X9 447 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 ZNF34Q8IZ26 560 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 EID3Q8N140 333 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 WDCPQ9H6R7 721 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 A0A088AWK7 358 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 UBE2QL1A1L167 161 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 PAEPP09466 180 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 ZNF10P21506 573 aaPredicted RBP10.25□□□□□ -0.77
SIM1-202ENST00000369208 CDC25CP30307 473 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 FDFT1P37268 417 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 PSMD4P55036 377 aaKnown RBP10.25□□□□□ -0.77
SIM1-202ENST00000369208 PLET1Q6UQ28 207 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 C8orf59Q8N0T1 100 aaPredicted RBP10.25□□□□□ -0.77
SIM1-202ENST00000369208 RTFDC1Q9BY42 306 aaPredicted RBP10.25□□□□□ -0.77
SIM1-202ENST00000369208 VTI1BQ9UEU0 232 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 TSR3Q9UJK0 312 aaKnown RBP10.25□□□□□ -0.77
SIM1-202ENST00000369208 DDX3XO00571 662 aaKnown RBP eCLIP10.25□□□□□ -0.77
SIM1-202ENST00000369208 HAT1O14929 419 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 NMT2O60551 498 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 GEMP55040 296 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 CYP4F8P98187 520 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 BTG3Q14201 252 aaPredicted RBP10.25□□□□□ -0.77
SIM1-202ENST00000369208 TBRG1Q3YBR2 411 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 MB21D2Q8IYB1 491 aaPredicted RBP10.25□□□□□ -0.77
SIM1-202ENST00000369208 SLC13A1Q9BZW2 595 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 SLA2Q9H6Q3 261 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 ZC3H7BQ9UGR2 993 aaKnown RBP10.25□□□□□ -0.77
SIM1-202ENST00000369208 IGKV5-2P06315 115 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 EPB42P16452 691 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 MZF1P28698 734 aaPredicted RBP10.25□□□□□ -0.77
SIM1-202ENST00000369208 SCN1BQ07699 218 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 CLCA4Q14CN2 919 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 ZCCHC8Q6NZY4 707 aaKnown RBP10.25□□□□□ -0.77
SIM1-202ENST00000369208 PMF1Q6P1K2 205 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 C10orf107Q8IVU9 208 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 OR8H3Q8N146 312 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.25□□□□□ -0.77
SIM1-202ENST00000369208 FRMPD1Q5SYB0 1578 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 TDP2O95551 362 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 RRM2P31350 389 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 GDI2P50395 445 aaKnown RBP10.25□□□□□ -0.77
SIM1-202ENST00000369208 CLYBLQ8N0X4 340 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 MYO1HQ8N1T3 1032 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 MCOLN3Q8TDD5 553 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 TMEM39BQ9GZU3 492 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 ZSCAN5CA6NGD5 496 aaPredicted RBP10.25□□□□□ -0.77
SIM1-202ENST00000369208 OPLAHO14841 1288 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 PRCPP42785 496 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 ASCC1Q8N9N2 400 aaKnown RBP10.25□□□□□ -0.77
SIM1-202ENST00000369208 ART5Q96L15 291 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 ZSCAN5AQ9BUG6 496 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 POLR3BQ9NW08 1133 aaPredicted RBP10.25□□□□□ -0.77
SIM1-202ENST00000369208 SAE1Q9UBE0 346 aaPredicted RBP10.25□□□□□ -0.77
SIM1-202ENST00000369208 SPASTQ9UBP0 616 aa10.25□□□□□ -0.77
SIM1-202ENST00000369208 NEU2Q9Y3R4 380 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms