RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 STMN2Q93045 179 aa22.6■■□□□ 1.21
UPF3A-201ENST00000351487 FAM161BQ96MY7 647 aa22.6■■□□□ 1.21
UPF3A-201ENST00000351487 PTPRDP23468 1912 aa22.6■■□□□ 1.21
UPF3A-201ENST00000351487 MPOP05164 745 aa22.59■■□□□ 1.21
UPF3A-201ENST00000351487 CPA3P15088 417 aa22.59■■□□□ 1.21
UPF3A-201ENST00000351487 VHLP40337 213 aa22.59■■□□□ 1.21
UPF3A-201ENST00000351487 ABCE1P61221 599 aaKnown RBP22.59■■□□□ 1.21
UPF3A-201ENST00000351487 UPP1Q16831 310 aa22.59■■□□□ 1.21
UPF3A-201ENST00000351487 TSNAXIP1Q2TAA8 658 aa22.59■■□□□ 1.21
UPF3A-201ENST00000351487 NET1Q7Z628 596 aaPredicted RBP22.59■■□□□ 1.21
UPF3A-201ENST00000351487 SCUBE1Q8IWY4 988 aa22.59■■□□□ 1.21
UPF3A-201ENST00000351487 EDEM1Q92611 657 aa22.59■■□□□ 1.21
UPF3A-201ENST00000351487 LPPQ93052 612 aa22.59■■□□□ 1.21
UPF3A-201ENST00000351487 MYLPFQ96A32 169 aa22.59■■□□□ 1.21
UPF3A-201ENST00000351487 MIEF2Q96C03 454 aa22.59■■□□□ 1.21
UPF3A-201ENST00000351487 MFSD3Q96ES6 412 aa22.59■■□□□ 1.21
UPF3A-201ENST00000351487 RTP3Q9BQQ7 232 aa22.59■■□□□ 1.21
UPF3A-201ENST00000351487 SOX13Q9UN79 622 aa22.59■■□□□ 1.21
UPF3A-201ENST00000351487 APOBEC2Q9Y235 224 aaKnown RBP22.59■■□□□ 1.21
UPF3A-201ENST00000351487 AP3B1O00203 1094 aa22.59■■□□□ 1.21
UPF3A-201ENST00000351487 KLHL2O95198 593 aa22.59■■□□□ 1.21
UPF3A-201ENST00000351487 CELF2O95319 508 aaKnown RBP22.59■■□□□ 1.21
UPF3A-201ENST00000351487 DNAJB2P25686 324 aa22.59■■□□□ 1.21
UPF3A-201ENST00000351487 RGS2P41220 211 aa22.59■■□□□ 1.21
UPF3A-201ENST00000351487 SLC34A1Q06495 639 aa22.59■■□□□ 1.21
UPF3A-201ENST00000351487 CCDC6Q16204 474 aa22.59■■□□□ 1.21
UPF3A-201ENST00000351487 TIGD5Q53EQ6 642 aa22.59■■□□□ 1.21
UPF3A-201ENST00000351487 AGMOQ6ZNB7 445 aa22.59■■□□□ 1.21
UPF3A-201ENST00000351487 TAC4Q86UU9 113 aa22.59■■□□□ 1.21
UPF3A-201ENST00000351487 AGAP2Q99490 1192 aa22.59■■□□□ 1.21
UPF3A-201ENST00000351487 APBA2Q99767 749 aa22.59■■□□□ 1.21
UPF3A-201ENST00000351487 SENP6Q9GZR1 1112 aaPredicted RBP22.59■■□□□ 1.21
UPF3A-201ENST00000351487 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.59■■□□□ 1.21
UPF3A-201ENST00000351487 ARHGAP42A6NI28 874 aa22.58■■□□□ 1.21
UPF3A-201ENST00000351487 ZNF195O14628 629 aa22.58■■□□□ 1.21
UPF3A-201ENST00000351487 TIMM44O43615 452 aa22.58■■□□□ 1.21
UPF3A-201ENST00000351487 SCNN1GP51170 649 aa22.58■■□□□ 1.21
UPF3A-201ENST00000351487 BLMHQ13867 455 aa22.58■■□□□ 1.21
UPF3A-201ENST00000351487 TRMT5Q32P41 509 aaKnown RBP22.58■■□□□ 1.21
UPF3A-201ENST00000351487 CERCAMQ5T4B2 595 aa22.58■■□□□ 1.21
UPF3A-201ENST00000351487 KCNMB4Q86W47 210 aa22.58■■□□□ 1.21
UPF3A-201ENST00000351487 PLD6Q8N2A8 252 aaKnown RBP22.58■■□□□ 1.21
UPF3A-201ENST00000351487 PLCD3Q8N3E9 789 aa22.58■■□□□ 1.21
UPF3A-201ENST00000351487 DNAJC9Q8WXX5 260 aa22.58■■□□□ 1.21
UPF3A-201ENST00000351487 ZNF333Q96JL9 665 aa22.58■■□□□ 1.21
UPF3A-201ENST00000351487 ZNF358Q9NW07 568 aa22.58■■□□□ 1.21
UPF3A-201ENST00000351487 NMRK1Q9NWW6 199 aa22.58■■□□□ 1.21
UPF3A-201ENST00000351487 PCDHB12Q9Y5F1 795 aa22.58■■□□□ 1.21
UPF3A-201ENST00000351487 SNX10Q9Y5X0 201 aa22.58■■□□□ 1.21
UPF3A-201ENST00000351487 CACNG3O60359 315 aa22.58■■□□□ 1.2
UPF3A-201ENST00000351487 KPNA6O60684 536 aa22.58■■□□□ 1.2
UPF3A-201ENST00000351487 TBX10O75333 385 aa22.58■■□□□ 1.2
UPF3A-201ENST00000351487 ABL2P42684 1182 aa22.58■■□□□ 1.2
UPF3A-201ENST00000351487 MPP3Q13368 585 aa22.58■■□□□ 1.2
UPF3A-201ENST00000351487 THOC5Q13769 683 aaKnown RBP22.58■■□□□ 1.2
UPF3A-201ENST00000351487 ITGA9Q13797 1035 aa22.58■■□□□ 1.2
UPF3A-201ENST00000351487 HSP90AA5PQ58FG0 334 aa22.58■■□□□ 1.2
UPF3A-201ENST00000351487 NAPEPLDQ6IQ20 393 aa22.58■■□□□ 1.2
UPF3A-201ENST00000351487 FAM171BQ6P995 826 aa22.58■■□□□ 1.2
UPF3A-201ENST00000351487 RSPH3Q86UC2 560 aa22.58■■□□□ 1.2
UPF3A-201ENST00000351487 ULK2Q8IYT8 1036 aa22.58■■□□□ 1.2
UPF3A-201ENST00000351487 TSGA13Q96PP4 275 aa22.58■■□□□ 1.2
UPF3A-201ENST00000351487 RHOBTB2Q9BYZ6 727 aa22.58■■□□□ 1.2
UPF3A-201ENST00000351487 A0A096LPK6 155 aa22.57■■□□□ 1.2
UPF3A-201ENST00000351487 MYADML2A6NDP7 307 aa22.57■■□□□ 1.2
UPF3A-201ENST00000351487 CASTOR2A6NHX0 329 aa22.57■■□□□ 1.2
UPF3A-201ENST00000351487 NVLO15381 856 aaKnown RBP22.57■■□□□ 1.2
UPF3A-201ENST00000351487 ATP9BO43861 1147 aa22.57■■□□□ 1.2
UPF3A-201ENST00000351487 ODC1P11926 461 aa22.57■■□□□ 1.2
UPF3A-201ENST00000351487 AKR1A1P14550 325 aa22.57■■□□□ 1.2
UPF3A-201ENST00000351487 CPOXP36551 454 aa22.57■■□□□ 1.2
UPF3A-201ENST00000351487 GMPRP36959 345 aa22.57■■□□□ 1.2
UPF3A-201ENST00000351487 IDH3AP50213 366 aa22.57■■□□□ 1.2
UPF3A-201ENST00000351487 CDH17Q12864 832 aa22.57■■□□□ 1.2
UPF3A-201ENST00000351487 SNX30Q5VWJ9 437 aa22.57■■□□□ 1.2
UPF3A-201ENST00000351487 BEND5Q7L4P6 421 aa22.57■■□□□ 1.2
UPF3A-201ENST00000351487 ACBD6Q9BR61 282 aa22.57■■□□□ 1.2
UPF3A-201ENST00000351487 PAAF1Q9BRP4 392 aa22.57■■□□□ 1.2
UPF3A-201ENST00000351487 OSBPL2Q9H1P3 480 aa22.57■■□□□ 1.2
UPF3A-201ENST00000351487 PNPOQ9NVS9 261 aa22.57■■□□□ 1.2
UPF3A-201ENST00000351487 NEU3Q9UQ49 428 aa22.57■■□□□ 1.2
UPF3A-201ENST00000351487 TDRD15B5MCY1 1934 aaKnown RBP22.57■■□□□ 1.2
UPF3A-201ENST00000351487 SIN3BO75182 1162 aa22.57■■□□□ 1.2
UPF3A-201ENST00000351487 IGLV3-25P01717 112 aa22.57■■□□□ 1.2
UPF3A-201ENST00000351487 CYP2C18P33260 490 aa22.57■■□□□ 1.2
UPF3A-201ENST00000351487 CSRP3P50461 194 aa22.57■■□□□ 1.2
UPF3A-201ENST00000351487 MRPL10Q7Z7H8 261 aaKnown RBP22.57■■□□□ 1.2
UPF3A-201ENST00000351487 KIRREL3Q8IZU9 778 aa22.57■■□□□ 1.2
UPF3A-201ENST00000351487 URGCPQ8TCY9 931 aa22.57■■□□□ 1.2
UPF3A-201ENST00000351487 NRG4Q8WWG1 115 aa22.57■■□□□ 1.2
UPF3A-201ENST00000351487 AZIN2Q96A70 460 aa22.57■■□□□ 1.2
UPF3A-201ENST00000351487 ATXN7L3BQ96GX2 97 aa22.57■■□□□ 1.2
UPF3A-201ENST00000351487 NLRC5Q86WI3 1866 aa22.57■■□□□ 1.2
UPF3A-201ENST00000351487 PSMD3O43242 534 aa22.56■■□□□ 1.2
UPF3A-201ENST00000351487 CHRNA1P02708 482 aa22.56■■□□□ 1.2
UPF3A-201ENST00000351487 CYP11A1P05108 521 aa22.56■■□□□ 1.2
UPF3A-201ENST00000351487 HADHAP40939 763 aa22.56■■□□□ 1.2
UPF3A-201ENST00000351487 SESN3P58005 492 aa22.56■■□□□ 1.2
UPF3A-201ENST00000351487 COG7P83436 770 aa22.56■■□□□ 1.2
UPF3A-201ENST00000351487 EIF4EBP2Q13542 120 aaPredicted RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms