RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 GOLGA8NF8WBI6 632 aa16.21■□□□□ 0.19
HMGA1-202ENST00000347617 APOL1O14791 398 aa16.21■□□□□ 0.19
HMGA1-202ENST00000347617 AVILO75366 819 aa16.21■□□□□ 0.19
HMGA1-202ENST00000347617 GCATO75600 419 aa16.21■□□□□ 0.19
HMGA1-202ENST00000347617 CST3P01034 146 aaPredicted RBP16.21■□□□□ 0.19
HMGA1-202ENST00000347617 RPLP2P05387 115 aaKnown RBP16.21■□□□□ 0.19
HMGA1-202ENST00000347617 CYP2C9P11712 490 aa16.21■□□□□ 0.19
HMGA1-202ENST00000347617 PSMC3P17980 439 aa16.21■□□□□ 0.19
HMGA1-202ENST00000347617 SLC5A2P31639 672 aa16.21■□□□□ 0.19
HMGA1-202ENST00000347617 ATICP31939 592 aa16.21■□□□□ 0.19
HMGA1-202ENST00000347617 ALDH3B2P48448 385 aa16.21■□□□□ 0.19
HMGA1-202ENST00000347617 CD97P48960 835 aa16.21■□□□□ 0.19
HMGA1-202ENST00000347617 CDH6P55285 790 aa16.21■□□□□ 0.19
HMGA1-202ENST00000347617 PURAQ00577 322 aaKnown RBP16.21■□□□□ 0.19
HMGA1-202ENST00000347617 FLOT2Q14254 428 aa16.21■□□□□ 0.19
HMGA1-202ENST00000347617 DENND1BQ6P3S1 775 aa16.21■□□□□ 0.19
HMGA1-202ENST00000347617 MAVSQ7Z434 540 aa16.21■□□□□ 0.19
HMGA1-202ENST00000347617 HIPK4Q8NE63 616 aa16.21■□□□□ 0.19
HMGA1-202ENST00000347617 DNAJC1Q96KC8 554 aaKnown RBP16.21■□□□□ 0.19
HMGA1-202ENST00000347617 TSPAN18Q96SJ8 248 aa16.21■□□□□ 0.19
HMGA1-202ENST00000347617 PRPF18Q99633 342 aaKnown RBP16.21■□□□□ 0.19
HMGA1-202ENST00000347617 NUF2Q9BZD4 464 aa16.21■□□□□ 0.19
HMGA1-202ENST00000347617 CDH19Q9H159 772 aa16.21■□□□□ 0.19
HMGA1-202ENST00000347617 MRGBPQ9NV56 204 aa16.21■□□□□ 0.19
HMGA1-202ENST00000347617 DDX18Q9NVP1 670 aaKnown RBP16.21■□□□□ 0.19
HMGA1-202ENST00000347617 PAIP2BQ9ULR5 123 aaKnown RBP16.21■□□□□ 0.19
HMGA1-202ENST00000347617 DERAQ9Y315 318 aa16.21■□□□□ 0.19
HMGA1-202ENST00000347617 PRSS51A0A1B0GVH4 220 aa16.21■□□□□ 0.18
HMGA1-202ENST00000347617 ATP6V1G1O75348 118 aa16.21■□□□□ 0.18
HMGA1-202ENST00000347617 LYPLA1O75608 230 aaPredicted RBP16.21■□□□□ 0.18
HMGA1-202ENST00000347617 GRM5P41594 1212 aa16.21■□□□□ 0.18
HMGA1-202ENST00000347617 ZNF143P52747 638 aaPredicted RBP16.21■□□□□ 0.18
HMGA1-202ENST00000347617 PRKAA2P54646 552 aa16.21■□□□□ 0.18
HMGA1-202ENST00000347617 TXNL4AP83876 142 aaKnown RBP16.21■□□□□ 0.18
HMGA1-202ENST00000347617 TMED1Q13445 227 aa16.21■□□□□ 0.18
HMGA1-202ENST00000347617 MTM1Q13496 603 aa16.21■□□□□ 0.18
HMGA1-202ENST00000347617 BOLA3Q53S33 107 aa16.21■□□□□ 0.18
HMGA1-202ENST00000347617 CEP70Q8NHQ1 597 aa16.21■□□□□ 0.18
HMGA1-202ENST00000347617 HM13Q8TCT9 377 aa16.21■□□□□ 0.18
HMGA1-202ENST00000347617 FAM84AQ96KN4 292 aa16.21■□□□□ 0.18
HMGA1-202ENST00000347617 CNBD2Q96M20 576 aa16.21■□□□□ 0.18
HMGA1-202ENST00000347617 ZIC5Q96T25 663 aa16.21■□□□□ 0.18
HMGA1-202ENST00000347617 TBCBQ99426 244 aa16.21■□□□□ 0.18
HMGA1-202ENST00000347617 FERMT1Q9BQL6 677 aa16.21■□□□□ 0.18
HMGA1-202ENST00000347617 SPC25Q9HBM1 224 aa16.21■□□□□ 0.18
HMGA1-202ENST00000347617 VPS45Q9NRW7 570 aa16.21■□□□□ 0.18
HMGA1-202ENST00000347617 PNPOQ9NVS9 261 aa16.21■□□□□ 0.18
HMGA1-202ENST00000347617 COPG2Q9UBF2 871 aa16.21■□□□□ 0.18
HMGA1-202ENST00000347617 PCSK1NQ9UHG2 260 aa16.21■□□□□ 0.18
HMGA1-202ENST00000347617 SH3PXD2BA1X283 911 aa16.2■□□□□ 0.18
HMGA1-202ENST00000347617 C17orf102A2RUQ5 167 aa16.2■□□□□ 0.18
HMGA1-202ENST00000347617 KPNA7A9QM74 516 aa16.2■□□□□ 0.18
HMGA1-202ENST00000347617 UGT1A9O60656 530 aa16.2■□□□□ 0.18
HMGA1-202ENST00000347617 STAU1O95793 577 aaKnown RBP16.2■□□□□ 0.18
HMGA1-202ENST00000347617 APRTP07741 180 aa16.2■□□□□ 0.18
HMGA1-202ENST00000347617 MYL3P08590 195 aa16.2■□□□□ 0.18
HMGA1-202ENST00000347617 DARSP14868 501 aaKnown RBP16.2■□□□□ 0.18
HMGA1-202ENST00000347617 ZFXP17010 805 aaPredicted RBP16.2■□□□□ 0.18
HMGA1-202ENST00000347617 GLDCP23378 1020 aa16.2■□□□□ 0.18
HMGA1-202ENST00000347617 COG7P83436 770 aa16.2■□□□□ 0.18
HMGA1-202ENST00000347617 NIPAL4Q0D2K0 466 aa16.2■□□□□ 0.18
HMGA1-202ENST00000347617 TAF2Q6P1X5 1199 aa16.2■□□□□ 0.18
HMGA1-202ENST00000347617 C16orf46Q6P387 395 aa16.2■□□□□ 0.18
HMGA1-202ENST00000347617 PACS1Q6VY07 963 aa16.2■□□□□ 0.18
HMGA1-202ENST00000347617 Q6ZNX1 250 aa16.2■□□□□ 0.18
HMGA1-202ENST00000347617 PGAM4Q8N0Y7 254 aa16.2■□□□□ 0.18
HMGA1-202ENST00000347617 CPSF7Q8N684 471 aaKnown RBP16.2■□□□□ 0.18
HMGA1-202ENST00000347617 PLD5Q8N7P1 536 aa16.2■□□□□ 0.18
HMGA1-202ENST00000347617 SHKBP1Q8TBC3 707 aa16.2■□□□□ 0.18
HMGA1-202ENST00000347617 TFAP2BQ92481 460 aa16.2■□□□□ 0.18
HMGA1-202ENST00000347617 TOP1MTQ969P6 601 aa16.2■□□□□ 0.18
HMGA1-202ENST00000347617 ZNF668Q96K58 619 aaPredicted RBP16.2■□□□□ 0.18
HMGA1-202ENST00000347617 MTG1Q9BT17 334 aaPredicted RBP16.2■□□□□ 0.18
HMGA1-202ENST00000347617 OSBPL11Q9BXB4 747 aa16.2■□□□□ 0.18
HMGA1-202ENST00000347617 MTMR12Q9C0I1 747 aa16.2■□□□□ 0.18
HMGA1-202ENST00000347617 UGT1A7Q9HAW7 530 aa16.2■□□□□ 0.18
HMGA1-202ENST00000347617 UGT1A10Q9HAW8 530 aa16.2■□□□□ 0.18
HMGA1-202ENST00000347617 UGT1A8Q9HAW9 530 aa16.2■□□□□ 0.18
HMGA1-202ENST00000347617 PCDH18Q9HCL0 1135 aa16.2■□□□□ 0.18
HMGA1-202ENST00000347617 TUBA8Q9NY65 449 aaPredicted RBP16.2■□□□□ 0.18
HMGA1-202ENST00000347617 FAF1Q9UNN5 650 aaPredicted RBP16.2■□□□□ 0.18
HMGA1-202ENST00000347617 LACTBL1A8MY62 500 aa16.19■□□□□ 0.18
HMGA1-202ENST00000347617 SEPT4O43236 478 aa16.19■□□□□ 0.18
HMGA1-202ENST00000347617 DCXO43602 365 aa16.19■□□□□ 0.18
HMGA1-202ENST00000347617 PRPSAP2O60256 369 aa16.19■□□□□ 0.18
HMGA1-202ENST00000347617 CLASP2O75122 1294 aaKnown RBP16.19■□□□□ 0.18
HMGA1-202ENST00000347617 C8BP07358 591 aa16.19■□□□□ 0.18
HMGA1-202ENST00000347617 ATP6V1B1P15313 513 aa16.19■□□□□ 0.18
HMGA1-202ENST00000347617 GPD1P21695 349 aa16.19■□□□□ 0.18
HMGA1-202ENST00000347617 ME2P23368 584 aa16.19■□□□□ 0.18
HMGA1-202ENST00000347617 HOXA11P31270 313 aaPredicted RBP16.19■□□□□ 0.18
HMGA1-202ENST00000347617 FLT3LGP49771 235 aa16.19■□□□□ 0.18
HMGA1-202ENST00000347617 BCAR1P56945 870 aa16.19■□□□□ 0.18
HMGA1-202ENST00000347617 TFAMQ00059 246 aaKnown RBP16.19■□□□□ 0.18
HMGA1-202ENST00000347617 ZNF423Q2M1K9 1284 aa16.19■□□□□ 0.18
HMGA1-202ENST00000347617 SLC10A6Q3KNW5 377 aa16.19■□□□□ 0.18
HMGA1-202ENST00000347617 PIGGQ5H8A4 983 aa16.19■□□□□ 0.18
HMGA1-202ENST00000347617 SLC9A4Q6AI14 798 aa16.19■□□□□ 0.18
HMGA1-202ENST00000347617 RWDD4Q6NW29 188 aaKnown RBP16.19■□□□□ 0.18
HMGA1-202ENST00000347617 NPNTQ6UXI9 565 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms