RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 RTKNQ9BST9 563 aa16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 SPON2Q9BUD6 331 aa16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 GPR174Q9BXC1 333 aa16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 XPO4Q9C0E2 1151 aaKnown RBP16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 BTBD1Q9H0C5 482 aa16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 PCED1AQ9H1Q7 454 aa16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 WSB2Q9NYS7 404 aaPredicted RBP16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 MPP6Q9NZW5 540 aa16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 CNOT8Q9UFF9 292 aaKnown RBP16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 SLCO3A1Q9UIG8 710 aa16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 HPCAL4Q9UM19 191 aa16.19■□□□□ 0.18
TSPAN4-201ENST00000346501 ILVBLA1L0T0 632 aa16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 TTC34A8MYJ7 566 aa16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 CCP110O43303 1012 aa16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 SIN3BO75182 1162 aa16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 ADH1BP00325 375 aa16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 CFIP05156 583 aa16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 PLEKP08567 350 aaPredicted RBP16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 RECQLP46063 649 aaPredicted RBP16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 VASPP50552 380 aaPredicted RBP16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 HDAC4P56524 1084 aa16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 RPS14P62263 151 aaKnown RBP16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 ELAVL3Q14576 367 aaKnown RBP16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 DUOXA1Q1HG43 343 aa16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 ALFQ53S48 1182 aa16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 TRIM61Q5EBN2 209 aa16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 FAM46CQ5VWP2 391 aa16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 SPECC1LQ69YQ0 1117 aa16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 USP30Q70CQ3 517 aa16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 TMC6Q7Z403 805 aa16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 FAM124AQ86V42 546 aa16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 DCAF4L2Q8NA75 395 aa16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 ATP11CQ8NB49 1132 aa16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 RNF214Q8ND24 703 aa16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 ZNF419Q96HQ0 510 aaPredicted RBP16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 MRGPRX3Q96LB0 322 aa16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 EPAS1Q99814 870 aa16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 SYT11Q9BT88 431 aa16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 RSPH9Q9H1X1 276 aaPredicted RBP16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 SGK2Q9HBY8 427 aa16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 TMPRSS4Q9NRS4 437 aa16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 TAS2R14Q9NYV8 317 aa16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 EVLQ9UI08 416 aaPredicted RBP16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 SNX10Q9Y5X0 201 aa16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 USP34Q70CQ2 3546 aa16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 CKAP5Q14008 2032 aa16.18■□□□□ 0.18
TSPAN4-201ENST00000346501 DDX3XO00571 662 aaKnown RBP eCLIP16.17■□□□□ 0.181e-6■■■■□ 19.5
TSPAN4-201ENST00000346501 IGLV3-19P01714 112 aa16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 RHOQP17081 205 aa16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 ITPKAP23677 461 aa16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 MAPKAPK2P49137 400 aa16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 STK19P49842 368 aaPredicted RBP16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 CLCN6P51797 869 aa16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 GEMIN4P57678 1058 aaKnown RBP16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 RPL7AP62424 266 aaKnown RBP16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 GFPT1Q06210 699 aaPredicted RBP16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 SLC20A2Q08357 652 aa16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 CCDC15Q0P6D6 951 aa16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 MAMLD1Q13495 774 aa16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 CST6Q15828 149 aa16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 C9orf64Q5T6V5 341 aa16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 SH3PXD2AQ5TCZ1 1133 aa16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 PLEKHA7Q6IQ23 1121 aa16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 DGLUCYQ7Z3D6 616 aa16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 ZNF354CQ86Y25 554 aa16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 MMAAQ8IVH4 418 aaKnown RBP16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 DRC7Q8IY82 874 aa16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 RMDN1Q96DB5 314 aa16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 MYO19Q96H55 970 aa16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 EDEM2Q9BV94 578 aa16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 DEF6Q9H4E7 631 aa16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 CATSPERBQ9H7T0 1116 aa16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 ATP13A1Q9HD20 1204 aa16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 ANLNQ9NQW6 1124 aa16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 FBXL12Q9NXK8 326 aa16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 MYO1AQ9UBC5 1043 aa16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 ADAMTS1Q9UHI8 967 aa16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 PLXND1Q9Y4D7 1925 aa16.17■□□□□ 0.18
TSPAN4-201ENST00000346501 TCRBV5S1A1TA0A578 114 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 LRRC72A6NJI9 287 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 EIF3CLB5ME19 914 aaKnown RBP16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 C1QTNF3-AMACRE9PGA6 284 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 CBX4O00257 560 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 ATP9BO43861 1147 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 BNIP3LO60238 219 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 IL1BP01584 269 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 C5AR1P21730 350 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 EPHB2P29323 1055 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 CASP14P31944 242 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 L1CAMP32004 1257 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 SLC8A1P32418 973 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 NUMBP49757 651 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 IRAK1P51617 712 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 LIMK1P53667 647 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 GNA12Q03113 381 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 SCAPQ12770 1279 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 DLG2Q15700 870 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 PPP1R15BQ5SWA1 713 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 DAB2IPQ5VWQ8 1189 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 ERMP1Q7Z2K6 904 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms