RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 DOK6Q6PKX4 331 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 CES3Q6UWW8 571 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 REPS1Q96D71 796 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 ZBTB10Q96DT7 871 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 IL1BP01584 269 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 CSE1LP55060 971 aaKnown RBP11.09□□□□□ -0.63
CLCN6-202ENST00000346436 MLLT1Q03111 559 aaPredicted RBP11.09□□□□□ -0.63
CLCN6-202ENST00000346436 TUSC3Q13454 348 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 CRY2Q49AN0 593 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 VSIG10LQ86VR7 867 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 NRBF2Q96F24 287 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 GUCA1CO95843 209 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 ZNF7P17097 686 aaPredicted RBP11.09□□□□□ -0.63
CLCN6-202ENST00000346436 EEF1B2P24534 225 aaKnown RBP11.09□□□□□ -0.63
CLCN6-202ENST00000346436 PTPN4P29074 926 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 NAIF1Q69YI7 327 aaPredicted RBP11.09□□□□□ -0.63
CLCN6-202ENST00000346436 DENND1BQ6P3S1 775 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 CNKSR3Q6P9H4 555 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 UNC93AQ86WB7 457 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 FAM131BQ86XD5 332 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 POU5F2Q8N7G0 328 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 BCO2Q9BYV7 579 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 ZDHHC6Q9H6R6 413 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 TMEM134Q9H6X4 195 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 MTHFRP42898 656 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 SH3BGRP55822 239 aaPredicted RBP11.08□□□□□ -0.64
CLCN6-202ENST00000346436 TLE2Q04725 743 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 BTKQ06187 659 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 GNA13Q14344 377 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 CYP2A13Q16696 494 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 HSP90AA5PQ58FG0 334 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 LPCAT1Q8NF37 534 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 C18orf25Q96B23 403 aaPredicted RBP11.08□□□□□ -0.64
CLCN6-202ENST00000346436 TRIT1Q9H3H1 467 aaKnown RBP11.08□□□□□ -0.64
CLCN6-202ENST00000346436 INTS7Q9NVH2 962 aaKnown RBP11.08□□□□□ -0.64
CLCN6-202ENST00000346436 DNAJC16Q9Y2G8 782 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 ASTN2O75129 1339 aaPredicted RBP11.08□□□□□ -0.64
CLCN6-202ENST00000346436 IGLV3-22A0A075B6J6 115 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 TBC1D3DA0A087WVF3 549 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 TBC1D3IA0A087WXS9 549 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 TBC1D3EA0A087X179 549 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 TBC1D3KA0A087X1G2 549 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 TBC1D3FA6NER0 549 aaPredicted RBP11.08□□□□□ -0.64
CLCN6-202ENST00000346436 TBC1D3LB9A6J9 549 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 TBC1D3HP0C7X1 549 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 STIP1P31948 543 aaKnown RBP11.08□□□□□ -0.64
CLCN6-202ENST00000346436 MCL1Q07820 350 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 ALG11Q2TAA5 492 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 TBC1D3GQ6DHY5 549 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 TBC1D3CQ6IPX1 549 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 TATDN1Q6P1N9 297 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 TBC1D3Q8IZP1 549 aaPredicted RBP11.08□□□□□ -0.64
CLCN6-202ENST00000346436 ZSCAN1Q8NBB4 408 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 NETO2Q8NC67 525 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 PPCSQ9HAB8 311 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 AVENQ9NQS1 362 aaPredicted RBP11.08□□□□□ -0.64
CLCN6-202ENST00000346436 GEMIN8Q9NWZ8 242 aaKnown RBP11.08□□□□□ -0.64
CLCN6-202ENST00000346436 SLC24A2Q9UI40 661 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 ERVW-1Q9UQF0 538 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 HCN4Q9Y3Q4 1203 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 EVPLLA8MZ36 301 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 F8W810 466 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 LIASO43766 372 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 ENTPD5O75356 428 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 USP2O75604 605 aaPredicted RBP11.08□□□□□ -0.64
CLCN6-202ENST00000346436 SERPINB5P36952 375 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 GLRBP48167 497 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 MMRN1Q13201 1228 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 C15orf59Q2T9L4 293 aaPredicted RBP11.08□□□□□ -0.64
CLCN6-202ENST00000346436 DNAL1Q4LDG9 190 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 LAYNQ6UX15 382 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 FAM43BQ6ZT52 329 aaPredicted RBP11.08□□□□□ -0.64
CLCN6-202ENST00000346436 KATNAL2Q8IYT4 538 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 IGKV6D-41A0A0C4DH26 115 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 AVILO75366 819 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 SEC24DO94855 1032 aaPredicted RBP11.08□□□□□ -0.64
CLCN6-202ENST00000346436 FOSL2P15408 326 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 MIPP30301 263 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 RFX3P48380 749 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 CRYMQ14894 314 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 FASTKD3Q14CZ7 662 aaKnown RBP11.08□□□□□ -0.64
CLCN6-202ENST00000346436 SLC9A9Q8IVB4 645 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 BEND7Q8N7W2 519 aaPredicted RBP11.08□□□□□ -0.64
CLCN6-202ENST00000346436 COL20A1Q9P218 1284 aa11.08□□□□□ -0.64
CLCN6-202ENST00000346436 CLUHO75153 1309 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 LRRC14BA6NHZ5 514 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 SYCE1LA8MT33 242 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 FSCN2O14926 492 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 ANGPT2O15123 496 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 CFIP05156 583 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 SYN1P17600 705 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 TRPC1P48995 793 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 DRG2P55039 364 aaKnown RBP11.07□□□□□ -0.64
CLCN6-202ENST00000346436 FAM83EQ2M2I3 478 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 SCUBE3Q8IX30 993 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 ZNF614Q8N883 585 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 PHC3Q8NDX5 983 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 GRID1Q9ULK0 1009 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 RPS6KL1Q9Y6S9 549 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 FCHO1O14526 889 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms