RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 CHD5Q8TDI0 1954 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 SOBPA7XYQ1 873 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 F5H423 210 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 GOLGA8MH3BSY2 632 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 LINC01565O15544 149 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 MTSS1O43312 755 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 OPHN1O60890 802 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 CLDN11O75508 207 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ZNF189O75820 626 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 PAPLNO95428 1278 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 GLP2RO95838 553 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 HSPA9P38646 679 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 GAD2Q05329 585 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ZBTB17Q13105 803 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 POLD3Q15054 466 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 PID1Q7Z2X4 250 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ZNF354CQ86Y25 554 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 USP33Q8TEY7 942 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 TDP1Q9NUW8 608 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 KLHL8Q9P2G9 620 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 IPO11Q9UI26 975 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 SHOC2Q9UQ13 582 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 A0A1B0GVM2 712 aa15.09■□□□□ 0.01
CDK5RAP3-201ENST00000338399 TCAF2A6NFQ2 919 aa15.09■□□□□ 0.01
CDK5RAP3-201ENST00000338399 TBL1XO60907 577 aa15.09■□□□□ 0.01
CDK5RAP3-201ENST00000338399 PPFIA2O75334 1257 aa15.09■□□□□ 0.01
CDK5RAP3-201ENST00000338399 PRAMEF12O95522 483 aa15.09■□□□□ 0.01
CDK5RAP3-201ENST00000338399 JCHAINP01591 159 aa15.09■□□□□ 0.01
CDK5RAP3-201ENST00000338399 NUMBP49757 651 aa15.09■□□□□ 0.01
CDK5RAP3-201ENST00000338399 KCNJ11Q14654 390 aa15.09■□□□□ 0.01
CDK5RAP3-201ENST00000338399 TEX44Q53QW1 395 aa15.09■□□□□ 0.01
CDK5RAP3-201ENST00000338399 LRRC49Q8IUZ0 686 aa15.09■□□□□ 0.01
CDK5RAP3-201ENST00000338399 FAM217AQ8IXS0 508 aa15.09■□□□□ 0.01
CDK5RAP3-201ENST00000338399 MREGQ8N565 214 aa15.09■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ZCCHC9Q8N567 271 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-201ENST00000338399 RIN3Q8TB24 985 aa15.09■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ZSCAN18Q8TBC5 510 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ZBTB9Q96C00 473 aa15.09■□□□□ 0.01
CDK5RAP3-201ENST00000338399 TMA16Q96EY4 203 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-201ENST00000338399 AGAP3Q96P47 875 aa15.09■□□□□ 0.01
CDK5RAP3-201ENST00000338399 TXLNGYQ9BZA5 131 aa15.09■□□□□ 0.01
CDK5RAP3-201ENST00000338399 RETREG1Q9H6L5 497 aa15.09■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.08■□□□□ 0.01
CDK5RAP3-201ENST00000338399 GFRA2O00451 464 aa15.08■□□□□ 0.01
CDK5RAP3-201ENST00000338399 MAP2K7O14733 419 aa15.08■□□□□ 0.01
CDK5RAP3-201ENST00000338399 MATN3O15232 486 aa15.08■□□□□ 0.01
CDK5RAP3-201ENST00000338399 CHADO15335 359 aa15.08■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ZBTB24O43167 697 aaPredicted RBP15.08■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ATP8B1O43520 1251 aa15.08■□□□□ 0.01
CDK5RAP3-201ENST00000338399 TMEM63AO94886 807 aa15.08■□□□□ 0.01
CDK5RAP3-201ENST00000338399 CCNB1P14635 433 aa15.08■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ACVRL1P37023 503 aa15.08■□□□□ 0.01
CDK5RAP3-201ENST00000338399 YBEYP58557 167 aaPredicted RBP15.08■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ZNF177Q13360 481 aaPredicted RBP15.08■□□□□ 0.01
CDK5RAP3-201ENST00000338399 PARP15Q460N3 678 aa15.08■□□□□ 0.01
CDK5RAP3-201ENST00000338399 TTC39BQ5VTQ0 682 aaPredicted RBP15.08■□□□□ 0.01
CDK5RAP3-201ENST00000338399 TIGD7Q6NT04 549 aaPredicted RBP15.08■□□□□ 0.01
CDK5RAP3-201ENST00000338399 CHST9Q7L1S5 443 aa15.08■□□□□ 0.01
CDK5RAP3-201ENST00000338399 HOOK3Q86VS8 718 aa15.08■□□□□ 0.01
CDK5RAP3-201ENST00000338399 HJURPQ8NCD3 748 aaPredicted RBP15.08■□□□□ 0.01
CDK5RAP3-201ENST00000338399 OR52K2Q8NGK3 314 aa15.08■□□□□ 0.01
CDK5RAP3-201ENST00000338399 VAT1Q99536 393 aa15.08■□□□□ 0.01
CDK5RAP3-201ENST00000338399 HPCAL4Q9UM19 191 aa15.08■□□□□ 0.01
CDK5RAP3-201ENST00000338399 A0A0D9SEW6 157 aa15.08■□□□□ 0
CDK5RAP3-201ENST00000338399 E2F8A0AVK6 867 aa15.08■□□□□ 0
CDK5RAP3-201ENST00000338399 J3KR12 359 aa15.08■□□□□ 0
CDK5RAP3-201ENST00000338399 APRTP07741 180 aa15.08■□□□□ 0
CDK5RAP3-201ENST00000338399 RHOCP08134 193 aa15.08■□□□□ 0
CDK5RAP3-201ENST00000338399 PSMB4P28070 264 aa15.08■□□□□ 0
CDK5RAP3-201ENST00000338399 FDFT1P37268 417 aa15.08■□□□□ 0
CDK5RAP3-201ENST00000338399 RGS19P49795 217 aa15.08■□□□□ 0
CDK5RAP3-201ENST00000338399 PMS2P54278 862 aa15.08■□□□□ 0
CDK5RAP3-201ENST00000338399 GNA12Q03113 381 aa15.08■□□□□ 0
CDK5RAP3-201ENST00000338399 SERINC3Q13530 473 aa15.08■□□□□ 0
CDK5RAP3-201ENST00000338399 SLMAPQ14BN4 828 aa15.08■□□□□ 0
CDK5RAP3-201ENST00000338399 C6orf118Q5T5N4 469 aa15.08■□□□□ 0
CDK5RAP3-201ENST00000338399 TMEM184AQ6ZMB5 413 aa15.08■□□□□ 0
CDK5RAP3-201ENST00000338399 ARID3BQ8IVW6 561 aaPredicted RBP15.08■□□□□ 0
CDK5RAP3-201ENST00000338399 CPXM2Q8N436 756 aa15.08■□□□□ 0
CDK5RAP3-201ENST00000338399 EFHBQ8N7U6 833 aa15.08■□□□□ 0
CDK5RAP3-201ENST00000338399 TDRD5Q8NAT2 981 aaKnown RBP15.08■□□□□ 0
CDK5RAP3-201ENST00000338399 UBLCP1Q8WVY7 318 aaPredicted RBP15.08■□□□□ 0
CDK5RAP3-201ENST00000338399 ARHGEF2Q92974 986 aaKnown RBP15.08■□□□□ 0
CDK5RAP3-201ENST00000338399 BHMTQ93088 406 aa15.08■□□□□ 0
CDK5RAP3-201ENST00000338399 FOXP3Q9BZS1 431 aa15.08■□□□□ 0
CDK5RAP3-201ENST00000338399 TSPYL1Q9H0U9 437 aa15.08■□□□□ 0
CDK5RAP3-201ENST00000338399 SP110Q9HB58 689 aa15.08■□□□□ 0
CDK5RAP3-201ENST00000338399 ZMYM5Q9UJ78 669 aa15.08■□□□□ 0
CDK5RAP3-201ENST00000338399 CDH22Q9UJ99 828 aa15.08■□□□□ 0
CDK5RAP3-201ENST00000338399 TRHDEQ9UKU6 1024 aa15.08■□□□□ 0
CDK5RAP3-201ENST00000338399 NUP210Q8TEM1 1887 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-201ENST00000338399 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-201ENST00000338399 TYW5A2RUC4 315 aaKnown RBP15.07■□□□□ 0
CDK5RAP3-201ENST00000338399 SMAPO00193 183 aa15.07■□□□□ 0
CDK5RAP3-201ENST00000338399 CD68P34810 354 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-201ENST00000338399 HSD17B3P37058 310 aa15.07■□□□□ 0
CDK5RAP3-201ENST00000338399 IFI35P80217 286 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-201ENST00000338399 SEMA5AQ13591 1074 aa15.07■□□□□ 0
CDK5RAP3-201ENST00000338399 UAP1Q16222 522 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-201ENST00000338399 PARP6Q2NL67 630 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms